prot_C-australica_Contig_1020.2.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1020.2.1
Unique Nameprot_C-australica_Contig_1020.2.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length175
Homology
BLAST of mRNA_C-australica_Contig_1020.2.1 vs. uniprot
Match: A0A835YLU7_9STRA (DNL-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLU7_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.810e-20
Identity = 39/66 (59.09%), Postives = 55/66 (83.33%), Query Frame = 0
Query:   84 LSLSFTCRVCDARSSYKVSRVAYKEGLVICVCSGCRRRHLIADNMGLMDFDDF-RHIEEFMAERGD 148
            ++L+FTC+ CD R+ YK+SRVAY +G+VIC CSGC+ RHLIADN GL+DF +F R+IE++M  +G+
Sbjct:    1 MTLAFTCKKCDTRNIYKISRVAYYQGIVICTCSGCQSRHLIADNKGLLDFPEFGRNIEDYMESQGE 66          
BLAST of mRNA_C-australica_Contig_1020.2.1 vs. uniprot
Match: A0A6H5JHA9_9PHAE (DNL-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA9_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.890e-17
Identity = 43/90 (47.78%), Postives = 66/90 (73.33%), Query Frame = 0
Query:   68 DPGASVSLGQIDLNPKLSLSFTCRVCDARSSYKVSRVAYKEGLVICVCSGCRRRHLIADNMGLMDFDDF-RHIEEFMAERGDEGDIVKRV 156
            D GA V  G + LN K++LSFTC VCD  ++++++RV++ +G+V+  C  C ++HLIADN+G +DF +F R++EEFMA++G     VKRV
Sbjct:   84 DDGAEV--GHVMLNRKITLSFTCNVCDGHNTHQINRVSFMQGIVVLWCQHCNQKHLIADNLGKLDFPEFGRNLEEFMAKKGTP---VKRV 168          
BLAST of mRNA_C-australica_Contig_1020.2.1 vs. uniprot
Match: A0A8D2E2Q0_SCIVU (DNL-type zinc finger n=2 Tax=Sciurini TaxID=337752 RepID=A0A8D2E2Q0_SCIVU)

HSP 1 Score: 83.2 bits (204), Expect = 5.970e-17
Identity = 45/106 (42.45%), Postives = 69/106 (65.09%), Query Frame = 0
Query:   65 STADPGASVSLGQIDLNPKLSLSFTCRVCDARSSYKVSRVAYKEGLVICVCSGCRRRHLIADNMG-LMDFDDFRHIEEFMAERGDEGDIVKRVSSLTPEGIVLEAV 169
            S++  G +V+LG ++      L +TCRVC  RSS ++S++AY +G+VI  C GC+  H+IADN+G   D D  R+IEE +A RG++   V+RV+      ++LEAV
Sbjct:   49 SSSGSGPAVALGHVETT-HYQLVYTCRVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLGWFSDLDGKRNIEEILASRGEK---VRRVAGQGALELILEAV 150          
BLAST of mRNA_C-australica_Contig_1020.2.1 vs. uniprot
Match: A0A1U7QQ44_MESAU (DNL-type zinc finger protein isoform X1 n=4 Tax=Cricetidae TaxID=337677 RepID=A0A1U7QQ44_MESAU)

HSP 1 Score: 83.2 bits (204), Expect = 7.020e-17
Identity = 46/104 (44.23%), Postives = 69/104 (66.35%), Query Frame = 0
Query:   69 PGASVSLGQIDLNPKLSLSFTCRVCDARSSYKVSRVAYKEGLVICVCSGCRRRHLIADNMG-LMDFDDFRHIEEFMAERGDEGDIVKRVSSLTPEGIVLEAVEP 171
            PGA+  LG+++ + +  L +TC+VC  RSS ++S++AY +G+VI  C GC+  H+IADN+G   D    R+IEE +A RG+E   V+RVS      ++LEA EP
Sbjct:   57 PGAA--LGRVEAD-RYQLVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLGWFSDLKGKRNIEEILAARGEE---VRRVSGEGALELILEAAEP 154          
BLAST of mRNA_C-australica_Contig_1020.2.1 vs. uniprot
Match: A0A250YAZ2_CASCN (DNL-type zinc finger n=1 Tax=Castor canadensis TaxID=51338 RepID=A0A250YAZ2_CASCN)

HSP 1 Score: 81.6 bits (200), Expect = 2.800e-16
Identity = 44/104 (42.31%), Postives = 67/104 (64.42%), Query Frame = 0
Query:   65 STADPGASVSLGQIDLNPKLSLSFTCRVCDARSSYKVSRVAYKEGLVICVCSGCRRRHLIADNMG-LMDFDDFRHIEEFMAERGDEGDIVKRVSSLTPEGIVLE 167
            ST+ PG + +LG+++      L +TC+VC  RSS ++S++AY +G+VI  C GC+  H+IADN+G   D D  R+IEE +A RG+E   V+RV+      + LE
Sbjct:   47 STSGPGPAAALGRVEA-AHYQLVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLGWFSDLDGKRNIEEILAARGEE---VRRVAGEGALELTLE 146          
BLAST of mRNA_C-australica_Contig_1020.2.1 vs. uniprot
Match: A0A2K5RX38_CEBIM (DNL-type zinc finger n=2 Tax=Cebus imitator TaxID=2715852 RepID=A0A2K5RX38_CEBIM)

HSP 1 Score: 80.5 bits (197), Expect = 8.120e-16
Identity = 43/105 (40.95%), Postives = 69/105 (65.71%), Query Frame = 0
Query:   65 STADPGASVSLGQIDLNPKLSLSFTCRVCDARSSYKVSRVAYKEGLVICVCSGCRRRHLIADNMG-LMDFDDFRHIEEFMAERGDEGDIVKRVSSLTPEGIVLEA 168
            S+++PG   +LG++++     L +TC+VC  RSS ++S++AY +G+VI  C GC+  H+IADN+G   D +  R+IEE +A RG++   V RV+      +VLEA
Sbjct:   49 SSSEPGPEAALGRVEV-AHYQLVYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLGWFSDLNGKRNIEEILAARGEQ---VHRVAGEGALELVLEA 149          
BLAST of mRNA_C-australica_Contig_1020.2.1 vs. uniprot
Match: UPI00033150A5 (DNL-type zinc finger protein n=1 Tax=Sorex araneus TaxID=42254 RepID=UPI00033150A5)

HSP 1 Score: 80.1 bits (196), Expect = 9.330e-16
Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = 0
Query:   64 WSTADPGASVSLGQIDLNPKLSLSFTCRVCDARSSYKVSRVAYKEGLVICVCSGCRRRHLIADNMG-LMDFDDFRHIEEFMAERGDEGDIVKRVSSLTPEGIVLEAVEP 171
            W  +    S  LG+++      L +TC+VC  RSS ++S++AY++G+V+  C GC+  H+IADN+G   D D  R+IEE +A RG+E   V+RV++     +VLE   P
Sbjct:   39 WGWSPRRTSSDLGRVEA-AHYQLVYTCKVCGTRSSNRISKLAYQQGVVLVTCPGCQNHHIIADNLGWFSDLDGKRNIEEILAARGEE---VRRVTNEGAVELVLETAGP 143          
BLAST of mRNA_C-australica_Contig_1020.2.1 vs. uniprot
Match: UPI000B4F5195 (DNL-type zinc finger protein isoform X1 n=1 Tax=Meriones unguiculatus TaxID=10047 RepID=UPI000B4F5195)

HSP 1 Score: 80.1 bits (196), Expect = 1.070e-15
Identity = 46/110 (41.82%), Postives = 70/110 (63.64%), Query Frame = 0
Query:   65 STADPGAS--VSLGQIDLNPKLSLSFTCRVCDARSSYKVSRVAYKEGLVICVCSGCRRRHLIADNMG-LMDFDDFRHIEEFMAERGDEGDIVKRVSSLTPEGIVLEAVEP 171
            S++ PG+    +LG++ ++    L +TC+VC  RSS ++S++AY +G+VI  C GC+  H+IADN+G   D    R+IEE +A RG+E   V RVS      ++LEA EP
Sbjct:   49 SSSMPGSGHVTALGRVQVD-HYQLIYTCKVCGTRSSKRISKLAYHQGVVIVTCPGCQNHHIIADNLGWFSDLKGKRNIEEILAARGEE---VHRVSGDDALELILEAAEP 154          
BLAST of mRNA_C-australica_Contig_1020.2.1 vs. uniprot
Match: A0A6I9JM28_CHRAS (DNL-type zinc finger protein n=1 Tax=Chrysochloris asiatica TaxID=185453 RepID=A0A6I9JM28_CHRAS)

HSP 1 Score: 79.7 bits (195), Expect = 1.670e-15
Identity = 42/100 (42.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query:   70 GASVSLGQIDLNPKLSLSFTCRVCDARSSYKVSRVAYKEGLVICVCSGCRRRHLIADNMG-LMDFDDFRHIEEFMAERGDEGDIVKRVSSLTPEGIVLEA 168
            G   +LG+++ +    L +TC+VC  RSS ++S++AY +G+VI  C GCR  H+IADN+G   D D  R++EE +A RG++   V+RV+      +VLEA
Sbjct:   56 GPGTALGRVE-SKHYQLVYTCKVCGTRSSKRISKLAYHQGVVIVTCQGCRNHHIIADNLGWFSDLDGKRNVEEILAARGEQ---VRRVAGDGALEVVLEA 151          
BLAST of mRNA_C-australica_Contig_1020.2.1 vs. uniprot
Match: UPI001C5344F4 (DNL-type zinc finger protein n=1 Tax=Dipodomys spectabilis TaxID=105255 RepID=UPI001C5344F4)

HSP 1 Score: 79.3 bits (194), Expect = 2.150e-15
Identity = 43/107 (40.19%), Postives = 69/107 (64.49%), Query Frame = 0
Query:   66 TADPGASVSLGQIDLNPKLSLSFTCRVCDARSSYKVSRVAYKEGLVICVCSGCRRRHLIADNMG-LMDFDDFRHIEEFMAERGDEGDIVKRVSSLTPEGIVLEAVEP 171
            T+ PG + +LG+++      L +TC+VC+ RSS ++S++AY  G+VI  C GC+  H+IADN+G   D D  R+IEE +A +G++   V+RV+    EG +   +EP
Sbjct:   48 TSGPGPAAALGRVEA-AHYQLVYTCKVCETRSSKRISKLAYHRGVVIVTCPGCQNHHIIADNLGWFSDLDGKRNIEEILAAKGEK---VRRVAG---EGALELTLEP 147          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1020.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YLU7_9STRA2.810e-2059.09DNL-type domain-containing protein n=1 Tax=Tribone... [more]
A0A6H5JHA9_9PHAE2.890e-1747.78DNL-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A8D2E2Q0_SCIVU5.970e-1742.45DNL-type zinc finger n=2 Tax=Sciurini TaxID=337752... [more]
A0A1U7QQ44_MESAU7.020e-1744.23DNL-type zinc finger protein isoform X1 n=4 Tax=Cr... [more]
A0A250YAZ2_CASCN2.800e-1642.31DNL-type zinc finger n=1 Tax=Castor canadensis Tax... [more]
A0A2K5RX38_CEBIM8.120e-1640.95DNL-type zinc finger n=2 Tax=Cebus imitator TaxID=... [more]
UPI00033150A59.330e-1639.45DNL-type zinc finger protein n=1 Tax=Sorex araneus... [more]
UPI000B4F51951.070e-1541.82DNL-type zinc finger protein isoform X1 n=1 Tax=Me... [more]
A0A6I9JM28_CHRAS1.670e-1542.00DNL-type zinc finger protein n=1 Tax=Chrysochloris... [more]
UPI001C5344F42.150e-1540.19DNL-type zinc finger protein n=1 Tax=Dipodomys spe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007853Zinc finger, DNL-typePFAMPF05180zf-DNLcoord: 86..148
e-value: 8.3E-22
score: 76.9
IPR007853Zinc finger, DNL-typePROSITEPS51501ZF_DNLcoord: 79..174
score: 14.008539
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..63
NoneNo IPR availablePANTHERPTHR20922:SF13DNL-TYPE ZINC FINGER PROTEINcoord: 59..149
IPR024158Mitochondrial import protein TIM15PANTHERPTHR20922UNCHARACTERIZEDcoord: 59..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1020contigC-australica_Contig_1020:1272..2140 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1020.2.1mRNA_C-australica_Contig_1020.2.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1020 1245..2201 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1020.2.1 ID=prot_C-australica_Contig_1020.2.1|Name=mRNA_C-australica_Contig_1020.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=175bp
MLPFFLIYLLALSEMAVAFHINPLVLTAGMRFAAVHRAKEGEGEEPTPLL
PPQDSASSVGGDSWSTADPGASVSLGQIDLNPKLSLSFTCRVCDARSSYK
VSRVAYKEGLVICVCSGCRRRHLIADNMGLMDFDDFRHIEEFMAERGDEG
DIVKRVSSLTPEGIVLEAVEPDDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007853Znf_DNL-typ
IPR024158Mt_import_TIM15