prot_C-australica_Contig_102.2.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_102.2.1
Unique Nameprot_C-australica_Contig_102.2.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length404
Homology
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match: A0A6H5K3J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J5_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 1.550e-60
Identity = 146/287 (50.87%), Postives = 180/287 (62.72%), Query Frame = 0
Query:   22 GLLKAFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEYGAFDRKFMTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFSPDGFLLASASGNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESLEFFCASPPDSSPVVSLGFSSNGSEVYAASHSSLRCITWDNDTAVAQVERSGEMSWG--GVQAMHITAEKQ 306
            G    FKAHE+VAH+   NCV +GPRSG VLATGG+DKRVNVW++GRAS+IWSLTGNSS IE+L FDP EE LVSGS+GGAVKL+DL  GK+ R+FRGHMSNVT I+ G+FDR+F+TT                                FSPDG +LASA+ +G+                         XXXXXXXXXXXXXXXXXXXXXX E +E FC + PD+ P  ++ F  +G ++Y AS S LR  +WDN  A AQ+E  G++ WG  G  A+H  A+ Q
Sbjct:   10 GSFAGFKAHEFVAHAGKTNCVAVGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSGIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFVTTGSMDCQVTDVQ---------------------FSPDGHILASAAADGQVKLWDLRAGKPMHTFQACSGAVRAIXXXXXXXXXXXXXXXXXXXXXXXEFMELFCPTAPDTCPTRAITFDPDGQKMYCASPSGLRRWSWDNHIASAQLEAMGDVPWGKVGAGALHYNADGQ 275          
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match: D8LQ17_ECTSI (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ17_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 1.730e-60
Identity = 198/287 (68.99%), Postives = 231/287 (80.49%), Query Frame = 0
Query:   22 GLLKAFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEYGAFDRKFMTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFSPDGFLLASASGNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESLEFFCASPPDSSPVVSLGFSSNGSEVYAASHSSLRCITWDNDTAVAQVERSGEMSWG--GVQAMHITAEKQ 306
            G   AFKAHE+VAH+   NCV +GPRSG VLATGG+DKRVNVW++GRAS+IWSLTGNSS IE+L FDP EE LVSGS+GGAVKL+DL  GK+ R+FRGHMSNVT I+ G+FDR+F+  XXXXXXXXXXXXXXXXXXXXXXXXXXXX    FSPDG +LASA+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E +E FC + PD+ P  ++ F  +G ++Y AS S LR  +WDNDTA A++E  G++ WG  G  A+H  A+ Q
Sbjct:   10 GSFAAFKAHEFVAHAGKTNCVAVGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDGHILASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFMELFCPTAPDTCPTRAITFDPDGQKMYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALHYNADGQ 296          
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match: A0A836CLK5_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK5_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.710e-53
Identity = 141/307 (45.93%), Postives = 167/307 (54.40%), Query Frame = 0
Query:   27 FKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEYGAFDRKFMTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFSPDGFLLASASGNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV------ESLEFFCASPPDSSPVVSLGFSSNGSEVYAASHSSLRCITWDNDTAVAQVERSGEMSWGGVQAMHITAEKQVVAASCASNFVTVWAVDLDDA 327
            FKAHE+VAHST VNCV IGP  GAVLATGGEDKRVNVWK+GRA++IWSL GNSSPIE + FD  EE L SGSSGGAVK YDL VGK+ RNFRGHMSNVTA+  GAFD  ++ T                                FSPDGFLLAS + +G+                              XXXXXXXXXXXXXXXXX       E +E FCA+ P+SS   ++ F++ G+                                   +A+H   E QVVAA+  SNFV++WA D+DDA
Sbjct:   13 FKAHEFVAHSTKVNCVAIGPH-GAVLATGGEDKRVNVWKIGRANHIWSLAGNSSPIECVCFDHAEENLYSGSSGGAVKQYDLTVGKMARNFRGHMSNVTALHSGAFDSAYLATGALDCVVKVWNTATKECVMAFKGHGAEVCEVQFSPDGFLLASGARDGDVRIWDVRAGKLLHAFAACGGGSGGGSGVRAXXXXXXXXXXXXXXXXXXXXXXXXEEMELFCATSPESSQFHAMAFNAEGN-----------------------------------RALHYNPEGQVVAATSTSNFVSIWAFDVDDA 283          
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match: A0A482STH4_9ARCH (Katanin_con80 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STH4_9ARCH)

HSP 1 Score: 121 bits (304), Expect = 3.270e-26
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 0
Query:   25 KAFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEY 129
            ++ +  E+VAHST VNC+ +G +S  VLATGGED +VN+W+VG  SNIW+L  N SPIE L FD  E  +VSG+  G++K++DL  GKL RN   H  NVT+++Y
Sbjct:    8 ESVRVQEFVAHSTQVNCLALGSKSSQVLATGGEDAKVNIWRVGSVSNIWTLGQNKSPIECLCFDADELCVVSGAMNGSLKVFDLNEGKLARNLGSHQVNVTSVQY 112          
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match: F0YMU1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMU1_AURAN)

HSP 1 Score: 112 bits (279), Expect = 6.010e-25
Identity = 56/103 (54.37%), Postives = 68/103 (66.02%), Query Frame = 0
Query:   26 AFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGR----ASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNV 124
            A K HE+VA   +V CV +GPRS  VLA+GGEDKR NVW++      A N+WSL GNSSPI  L FD  E  LVSG+ GG+V+LYDL  G+  R   GH + V
Sbjct:    3 AAKLHEWVASPAVVTCVALGPRSHQVLASGGEDKRANVWRLRPGDPGAQNVWSLGGNSSPISCLCFDDAENTLVSGAQGGSVRLYDLTEGRCARALNGHRNEV 105          
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match: A0A1D1UXW2_RAMVA (Katanin p80 WD40 repeat-containing subunit B1 n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1UXW2_RAMVA)

HSP 1 Score: 115 bits (289), Expect = 2.680e-24
Identity = 88/301 (29.24%), Postives = 130/301 (43.19%), Query Frame = 0
Query:   25 KAFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEYGAFDRKFMTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFSPDGFLLASASGNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESLEFFCASPPDSSPVVSLGFSSNGSEVYAASHSSLRCITWDNDTAVAQVERSGEMSWGGVQAMHIT-AEKQVVAASCASNFVTVWAVDL 324
            K  K  E  AHS+ V CV +G  +G VLATGG D  VN+W +G+ + + SL G SS  E + FDP EE + +GSS GA+K++D++  K++RN  GH + VTA+++ +FD  FM +      XXXXX                     FSP G  + S   +G                                                +E+ E   ++  DSSPV  + F  +GS + A     L+   W+       +     + WG V  M ++ +  Q+V AS     V  + VDL
Sbjct:    6 KITKIQELEAHSSAVTCVALGQLNGRVLATGGADCFVNLWVLGQKTALKSLPGLSSAAECVRFDPTEESVAAGSSSGALKIWDIEADKIKRNLTGHKTGVTALDFLSFDPNFMVSGSADCTXXXXXLRRKTCVVSYKGHQDTVREVLFSPHGKWITSGGIDGTIQIYQWQAGKSLKELIHAKAAVYSLAFHPKDLLLASTGQDGVVKFWDLETFEVVSSTEKDSSPVRCIRFQKDGSSLLAGCDDMLKVFGWEPAVCHDVIP----VGWGRVADMAVSGSSSQLVTASAGKTSVATYLVDL 302          
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match: A0A1B6FE44_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6FE44_9HEMI)

HSP 1 Score: 105 bits (261), Expect = 5.770e-24
Identity = 46/102 (45.10%), Postives = 71/102 (69.61%), Query Frame = 0
Query:   25 KAFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTA 126
            + +K  E+ AHS  VNC+ +G +SG VL TGG+DK+VN+W +G+ + I SL G+ +P+E + F+  EEL+ +GSSGG +K++DL+  K+ R   GH S + A
Sbjct:    7 RLWKVQEFKAHSANVNCLALGQKSGRVLVTGGDDKKVNLWAIGKNNCIMSLNGHITPVETVRFNHTEELVAAGSSGGVLKIWDLEATKIMRTLTGHRSGLRA 108          
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match: A0A7S2CHB8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2CHB8_9DINO)

HSP 1 Score: 105 bits (262), Expect = 1.610e-23
Identity = 45/105 (42.86%), Postives = 74/105 (70.48%), Query Frame = 0
Query:   25 KAFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEY 129
            + +K  EY AH+    C  +G +SG VLATGGED+RVN+WKVG+++ + SLTG++S +E L FD  EE+LV G +GG++++++L+  K+     GH +  +++E+
Sbjct:   43 RVWKLQEYTAHAGCTRCARLGEKSGQVLATGGEDRRVNIWKVGKSNAMMSLTGHNSTVECLVFDKQEEVLVVGCAGGSMQVWNLEYRKMAGTLTGHRTGCSSVEF 147          
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match: A0A3B4BK80_9GOBI (Katanin p80 (WD repeat containing) subunit B 1 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4BK80_9GOBI)

HSP 1 Score: 105 bits (261), Expect = 1.620e-22
Identity = 57/153 (37.25%), Postives = 83/153 (54.25%), Query Frame = 0
Query:   31 EYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEYGAFDRKFMTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFSPDGFLLASAS 183
            E+ AH++ V+C+ +G  SG +LATGGED RVN+W V +A+ I SLTG+ SP+E L  +  EE +V+GS  G++K++DL+  KLR    GH +N+T++        F+ +                                FSPDG  LASAS
Sbjct:   14 EFEAHTSRVSCLSLGKSSGRLLATGGEDCRVNIWAVSKANCIMSLTGSKSPVECLQLNASEEQVVAGSQSGSIKIWDLEAAKLR-TLMGHKANITSLGCHPLSENFLASSSMDTNIKLWDVRRKGYILRYQGHTDAVRSLAFSPDGKWLASAS 165          
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match: A0A383W973_TETOB (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W973_TETOB)

HSP 1 Score: 110 bits (274), Expect = 2.400e-22
Identity = 50/116 (43.10%), Postives = 78/116 (67.24%), Query Frame = 0
Query:   24 LKAFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEYGAFDRKFMTT 139
            ++++K  E+VAHS  VNC+ IG  +  VLATGGEDK+VN+W++G+   I +L G +SP+E + FDP E+ + +G++ G VK++DL  GK+  +  GH SN   IE+G  +   + T
Sbjct:    1 MRSYKLDEFVAHSGAVNCLRIGRNTAGVLATGGEDKKVNLWRIGQPHVIQTLVGLNSPVECVTFDPAEDKVGAGAANGTVKVWDLDTGKVCCSLTGHRSNCLTIEFGPPESNIVVT 116          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K3J5_9PHAE1.550e-6050.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ17_ECTSI1.730e-6068.99Katanin p80 WD40 repeat-containing subunit B1 homo... [more]
A0A836CLK5_9STRA1.710e-5345.93WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A482STH4_9ARCH3.270e-2652.38Katanin_con80 domain-containing protein n=1 Tax=ar... [more]
F0YMU1_AURAN6.010e-2554.37Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A1D1UXW2_RAMVA2.680e-2429.24Katanin p80 WD40 repeat-containing subunit B1 n=1 ... [more]
A0A1B6FE44_9HEMI5.770e-2445.10Uncharacterized protein (Fragment) n=2 Tax=Cicadel... [more]
A0A7S2CHB8_9DINO1.610e-2342.86Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A3B4BK80_9GOBI1.620e-2237.25Katanin p80 (WD repeat containing) subunit B 1 n=1... [more]
A0A383W973_TETOB2.400e-2243.10Katanin p80 WD40 repeat-containing subunit B1 homo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 137..151
score: 33.93
coord: 52..66
score: 30.27
coord: 179..193
score: 35.48
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 25..65
e-value: 0.024
score: 23.8
coord: 195..234
e-value: 0.0013
score: 28.0
coord: 68..107
e-value: 1.5E-4
score: 31.1
coord: 153..192
e-value: 1.5E-11
score: 54.4
coord: 237..277
e-value: 69.0
score: 5.4
coord: 110..150
e-value: 0.41
score: 19.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 155..192
e-value: 6.9E-8
score: 33.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 32..74
score: 10.976305
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 117..159
score: 11.243651
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 160..201
score: 17.994127
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 75..116
score: 11.377324
IPR024977Anaphase-promoting complex subunit 4, WD40 domainPFAMPF12894ANAPC4_WD40coord: 52..130
e-value: 4.6E-6
score: 26.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 78..348
e-value: 1.5E-53
score: 183.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 23..77
e-value: 3.3E-5
score: 25.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..403
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..364
NoneNo IPR availablePANTHERPTHR19845KATANIN P80 SUBUNITcoord: 30..360
NoneNo IPR availablePANTHERPTHR19845:SF0KATANIN P80 WD40 REPEAT-CONTAINING SUBUNIT B1coord: 30..360
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 32..66
score: 9.019239
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 160..194
score: 13.711943
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 75..109
score: 8.966513
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 117..153
score: 8.57106
NoneNo IPR availableCDDcd00200WD40coord: 30..321
e-value: 9.44016E-52
score: 173.29
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 179..193
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 27..320

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_102contigC-australica_Contig_102:1919..5063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_102.2.1mRNA_C-australica_Contig_102.2.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_102 1919..5063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_102.2.1 ID=prot_C-australica_Contig_102.2.1|Name=mRNA_C-australica_Contig_102.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=404bp
PSPPHLAPCPPIPMLGIYQQQGLLKAFKAHEYVAHSTLVNCVVIGPRSGA
VLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSG
GAVKLYDLQVGKLRRNFRGHMSNVTAIEYGAFDRKFMTTGSMDTVVKLWG
IDSKECAMSFKGHSSQVTAVTFSPDGFLLASASGNGEIKLWDLRGGKLLH
SFDAGPGVVKDIHFSPVEFLLAAATADRCVRLYDVESLEFFCASPPDSSP
VVSLGFSSNGSEVYAASHSSLRCITWDNDTAVAQVERSGEMSWGGVQAMH
ITAEKQVVAASCASNFVTVWAVDLDDAEEPQALALPPKVRKPSRGSSRVQ
GSSSNGSGGSKDHSEQKGTGLEVPSFQIRGTHLGSPRLSPRVADEKVTAH
PRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR024977Apc4_WD40_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf