prot_C-australica_Contig_10171.2.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_10171.2.1
Unique Nameprot_C-australica_Contig_10171.2.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length151
Homology
[Close]
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A0A2E9I5T7_9RHOB (AsnC family transcriptional regulator n=1 Tax=Mameliella sp. TaxID=1924940 RepID=A0A2E9I5T7_9RHOB)

HSP 1 Score: 290 bits (742), Expect = 4.390e-99
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0 
Query:    1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 150
            LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV
Sbjct:    3 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 152
[Close]
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A0A238JAD8_9RHOB (Leucine-responsive regulatory protein n=9 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A238JAD8_9RHOB)

HSP 1 Score: 268 bits (684), Expect = 3.070e-90
Identity = 135/150 (90.00%), Postives = 145/150 (96.67%), Query Frame = 0 
Query:    1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 150
            LDETD+RILRV+QRKGRISNADLSE VNLS SACHRRVQRLE DGYV+DYVALL+AR++G+P TVFVEIKL+AQADEVL+AFEKAVARVP VLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVF+TTALPV
Sbjct:    3 LDETDRRILRVLQRKGRISNADLSEEVNLSASACHRRVQRLEADGYVRDYVALLNARKLGMPTTVFVEIKLSAQADEVLEAFEKAVARVPDVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFKTTALPV 152
[Close]
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A0A0B3S4T6_9RHOB (AsnC family transcriptional regulator n=6 Tax=Rhodobacterales TaxID=204455 RepID=A0A0B3S4T6_9RHOB)

HSP 1 Score: 268 bits (684), Expect = 3.070e-90
Identity = 135/150 (90.00%), Postives = 146/150 (97.33%), Query Frame = 0 
Query:    1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 150
            LDETD+RILRV+QRKGRISNADLSE V+LS SACHRRVQRLET+GYV+DYVALLDARRMG P+TVFVEI LTAQADEVL+AFEKAV+RVP++LECHLMAGTADYILKVVAEDTEDFARIHRQYL+RLPGVAQMQSSFALRTVFRTTALPV
Sbjct:    3 LDETDRRILRVLQRKGRISNADLSEEVHLSASACHRRVQRLETEGYVRDYVALLDARRMGFPSTVFVEITLTAQADEVLEAFEKAVSRVPAILECHLMAGTADYILKVVAEDTEDFARIHRQYLSRLPGVAQMQSSFALRTVFRTTALPV 152
[Close]
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A0A0P1G8Z3_9RHOB (Leucine-responsive regulatory protein n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A0P1G8Z3_9RHOB)

HSP 1 Score: 268 bits (684), Expect = 3.070e-90
Identity = 135/150 (90.00%), Postives = 145/150 (96.67%), Query Frame = 0 
Query:    1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 150
            LDETDKRILRVIQR+GRISNA+LSE VNLSPSACHRRVQRLETDGYV+DYVALL+AR++GLP TVFVEI L AQADEVL+AFE AVARVP+VLECHLMAGTADYILKV+AEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVF+TTALPV
Sbjct:    3 LDETDKRILRVIQRRGRISNAELSEEVNLSPSACHRRVQRLETDGYVRDYVALLNARKLGLPTTVFVEITLNAQADEVLEAFETAVARVPAVLECHLMAGTADYILKVIAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFKTTALPV 152
[Close]
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A0A238KXZ2_9RHOB (Leucine-responsive regulatory protein n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238KXZ2_9RHOB)

HSP 1 Score: 263 bits (673), Expect = 1.460e-88
Identity = 132/150 (88.00%), Postives = 144/150 (96.00%), Query Frame = 0 
Query:    1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 150
            LDETD+RILRV+QRKGRISNADLSE V+LS SACHRRVQRLE +GY++DYVALLD RR+GLP TVFVEIKLTAQA+EVLDAFEKAV+RVP VLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFAL+TVF+TTALP+
Sbjct:    3 LDETDRRILRVLQRKGRISNADLSEEVHLSASACHRRVQRLEAEGYLRDYVALLDERRLGLPTTVFVEIKLTAQANEVLDAFEKAVSRVPDVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALKTVFKTTALPI 152
[Close]
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: UPI001C389DB0 (Lrp/AsnC family transcriptional regulator n=1 Tax=Thalassococcus sp. CAU 1522 TaxID=2851652 RepID=UPI001C389DB0)

HSP 1 Score: 263 bits (673), Expect = 1.460e-88
Identity = 132/150 (88.00%), Postives = 144/150 (96.00%), Query Frame = 0 
Query:    1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 150
            LDE D+RILR +Q+ GR+SNADLSE VNLSPSACHRRVQRLE DG ++DYVAL+DAR++GLPATVFVEIKL+AQADEVLDAFEKAVARVP+VLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVF+TTALPV
Sbjct:    3 LDEIDRRILRALQKHGRMSNADLSEQVNLSPSACHRRVQRLEDDGLIRDYVALVDARKLGLPATVFVEIKLSAQADEVLDAFEKAVARVPAVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFKTTALPV 152
[Close]
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A0A8J8B7M6_9RHOB (Lrp/AsnC family transcriptional regulator n=1 Tax=Aestuariicoccus sp. KMU-90 TaxID=2827239 RepID=A0A8J8B7M6_9RHOB)

HSP 1 Score: 261 bits (666), Expect = 1.700e-87
Identity = 129/149 (86.58%), Postives = 144/149 (96.64%), Query Frame = 0 
Query:    2 DETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 150
            DETD RILR +QR+GR+SNADLSEAVNLSPSACHRRVQRLE++G+++DYVALLDAR+MGLP TVFVEI L+AQAD+VL+AFEKAVARVP+VLECHLMAGTADYILKV+A DTEDFARIHRQYLTRLPGVAQMQSSFALRTVF+TTALPV
Sbjct:    4 DETDLRILRALQRRGRMSNADLSEAVNLSPSACHRRVQRLESEGFIRDYVALLDARKMGLPTTVFVEITLSAQADDVLEAFEKAVARVPAVLECHLMAGTADYILKVIAADTEDFARIHRQYLTRLPGVAQMQSSFALRTVFKTTALPV 152
[Close]
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A3K3F9_9RHOB (Transcriptional regulator, AsnC family protein n=6 Tax=Roseobacteraceae TaxID=2854170 RepID=A3K3F9_9RHOB)

HSP 1 Score: 260 bits (665), Expect = 3.880e-87
Identity = 129/150 (86.00%), Postives = 143/150 (95.33%), Query Frame = 0 
Query:    1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 150
            LDETD+R+LRV+QRKGR+SNADLSE VNLSPSACHRRVQRLE DGY++DYVALLDAR++ LP TVFVEI L AQADEVL+AFE AV+RVP+VLECHLMAGTADYILKVVAEDTED+ARIHRQYLTRLPGVAQMQSSFAL+TVF+TTALPV
Sbjct:   17 LDETDRRLLRVLQRKGRMSNADLSEQVNLSPSACHRRVQRLEADGYIRDYVALLDARKLSLPTTVFVEITLQAQADEVLEAFETAVSRVPAVLECHLMAGTADYILKVVAEDTEDYARIHRQYLTRLPGVAQMQSSFALKTVFKTTALPV 166
[Close]
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A0A7W6GSQ7_9RHOB (Lrp/AsnC family leucine-responsive transcriptional regulator n=1 Tax=Sagittula marina TaxID=943940 RepID=A0A7W6GSQ7_9RHOB)

HSP 1 Score: 259 bits (661), Expect = 9.840e-87
Identity = 128/150 (85.33%), Postives = 143/150 (95.33%), Query Frame = 0 
Query:    1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 150
            LDETD+RIL+V+QRKGR+SNA+LSE VNLS SACHRRVQRLETDGY++DYVAL+DAR+MGLP TVFVEI L+ QAD+VLDAFE AV RVP+VLECHLMAGTADYILKV+A+DTEDFARIHRQYLTRLPGVAQMQSSFALRTVF+TTALPV
Sbjct:    3 LDETDRRILKVLQRKGRMSNAELSEHVNLSASACHRRVQRLETDGYIRDYVALVDARKMGLPTTVFVEITLSTQADDVLDAFETAVQRVPAVLECHLMAGTADYILKVIAQDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFKTTALPV 152
[Close]
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: X6KWG5_9RHOB (AsnC family transcriptional regulator n=1 Tax=Rhodobacteraceae bacterium PD-2 TaxID=1169855 RepID=X6KWG5_9RHOB)

HSP 1 Score: 259 bits (661), Expect = 9.840e-87
Identity = 130/150 (86.67%), Postives = 142/150 (94.67%), Query Frame = 0 
Query:    1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 150
            LDETD+RILRV+QR+GRISNADLS AVNLS S+CHRRVQRLE +GYV+DYVALLDARR+G+P TVFVEI L+AQADEVL+AFE AVARVP VLECHLMAGTADYILK+VA DTEDFARIHRQYLTRLPGVAQMQSSFALRTVF+TTALPV
Sbjct:    3 LDETDRRILRVLQRRGRISNADLSGAVNLSASSCHRRVQRLEAEGYVRDYVALLDARRLGMPTTVFVEITLSAQADEVLEAFETAVARVPDVLECHLMAGTADYILKIVAADTEDFARIHRQYLTRLPGVAQMQSSFALRTVFKTTALPV 152
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E9I5T7_9RHOB4.390e-99100.00AsnC family transcriptional regulator n=1 Tax=Mame... [more]
A0A238JAD8_9RHOB3.070e-9090.00Leucine-responsive regulatory protein n=9 Tax=Rose... [more]
A0A0B3S4T6_9RHOB3.070e-9090.00AsnC family transcriptional regulator n=6 Tax=Rhod... [more]
A0A0P1G8Z3_9RHOB3.070e-9090.00Leucine-responsive regulatory protein n=2 Tax=Rose... [more]
A0A238KXZ2_9RHOB1.460e-8888.00Leucine-responsive regulatory protein n=1 Tax=Mali... [more]
UPI001C389DB01.460e-8888.00Lrp/AsnC family transcriptional regulator n=1 Tax=... [more]
A0A8J8B7M6_9RHOB1.700e-8786.58Lrp/AsnC family transcriptional regulator n=1 Tax=... [more]
A3K3F9_9RHOB3.880e-8786.00Transcriptional regulator, AsnC family protein n=6... [more]
A0A7W6GSQ7_9RHOB9.840e-8785.33Lrp/AsnC family leucine-responsive transcriptional... [more]
X6KWG5_9RHOB9.840e-8786.67AsnC family transcriptional regulator n=1 Tax=Rhod... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000485AsnC-type HTH domainPRINTSPR00033HTHASNCcoord: 17..28
score: 36.57
coord: 28..47
score: 38.33
coord: 1..17
score: 41.18
IPR000485AsnC-type HTH domainPROSITEPS50956HTH_ASNC_2coord: 1..62
score: 38.46405
IPR019888Transcription regulator AsnC-likeSMARTSM00344asnccoord: 1..110
e-value: 2.7E-41
score: 153.2
IPR019887Transcription regulator AsnC/Lrp, ligand binding domainPFAMPF01037AsnC_trans_regcoord: 67..141
e-value: 2.0E-23
score: 82.2
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 2..53
e-value: 2.3E-22
score: 80.2
NoneNo IPR availablePFAMPF13412HTH_24coord: 1..48
e-value: 3.7E-21
score: 74.4
NoneNo IPR availableGENE3D3.30.70.920coord: 54..138
e-value: 2.6E-26
score: 93.3
NoneNo IPR availablePANTHERPTHR30154LEUCINE-RESPONSIVE REGULATORY PROTEINcoord: 1..149
NoneNo IPR availablePANTHERPTHR30154:SF34TRANSCRIPTIONAL REGULATOR AZLBcoord: 1..149
IPR019885Transcription regulator HTH, AsnC-type, conserved sitePROSITEPS00519HTH_ASNC_1coord: 19..45
IPR011991ArsR-like helix-turn-helix domainCDDcd00090HTH_ARSRcoord: 2..50
e-value: 7.88993E-8
score: 44.9821
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 1..90
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 61..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10171contigC-australica_Contig_10171:383..835 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10171.2.1mRNA_C-australica_Contig_10171.2.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_10171 383..835 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_10171.2.1 ID=prot_C-australica_Contig_10171.2.1|Name=mRNA_C-australica_Contig_10171.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=151bp
LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDY
VALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAG
TADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000485AsnC-type_HTH_dom
IPR019888Tscrpt_reg_AsnC-like
IPR019887Tscrpt_reg_AsnC/Lrp_C
IPR036388WH-like_DNA-bd_sf
IPR019885Tscrpt_reg_HTH_AsnC-type_CS
IPR011991ArsR-like_HTH
IPR036390WH_DNA-bd_sf
IPR011008Dimeric_a/b-barrel