mRNA_C-australica_Contig_10171.2.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A0A2E9I5T7_9RHOB (AsnC family transcriptional regulator n=1 Tax=Mameliella sp. TaxID=1924940 RepID=A0A2E9I5T7_9RHOB) HSP 1 Score: 290 bits (742), Expect = 4.390e-99 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1 Query: 1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 450 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV Sbjct: 3 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 152
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A0A238JAD8_9RHOB (Leucine-responsive regulatory protein n=9 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A238JAD8_9RHOB) HSP 1 Score: 268 bits (684), Expect = 3.070e-90 Identity = 135/150 (90.00%), Postives = 145/150 (96.67%), Query Frame = 1 Query: 1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 450 LDETD+RILRV+QRKGRISNADLSE VNLS SACHRRVQRLE DGYV+DYVALL+AR++G+P TVFVEIKL+AQADEVL+AFEKAVARVP VLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVF+TTALPV Sbjct: 3 LDETDRRILRVLQRKGRISNADLSEEVNLSASACHRRVQRLEADGYVRDYVALLNARKLGMPTTVFVEIKLSAQADEVLEAFEKAVARVPDVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFKTTALPV 152
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A0A0B3S4T6_9RHOB (AsnC family transcriptional regulator n=6 Tax=Rhodobacterales TaxID=204455 RepID=A0A0B3S4T6_9RHOB) HSP 1 Score: 268 bits (684), Expect = 3.070e-90 Identity = 135/150 (90.00%), Postives = 146/150 (97.33%), Query Frame = 1 Query: 1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 450 LDETD+RILRV+QRKGRISNADLSE V+LS SACHRRVQRLET+GYV+DYVALLDARRMG P+TVFVEI LTAQADEVL+AFEKAV+RVP++LECHLMAGTADYILKVVAEDTEDFARIHRQYL+RLPGVAQMQSSFALRTVFRTTALPV Sbjct: 3 LDETDRRILRVLQRKGRISNADLSEEVHLSASACHRRVQRLETEGYVRDYVALLDARRMGFPSTVFVEITLTAQADEVLEAFEKAVSRVPAILECHLMAGTADYILKVVAEDTEDFARIHRQYLSRLPGVAQMQSSFALRTVFRTTALPV 152
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A0A0P1G8Z3_9RHOB (Leucine-responsive regulatory protein n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A0P1G8Z3_9RHOB) HSP 1 Score: 268 bits (684), Expect = 3.070e-90 Identity = 135/150 (90.00%), Postives = 145/150 (96.67%), Query Frame = 1 Query: 1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 450 LDETDKRILRVIQR+GRISNA+LSE VNLSPSACHRRVQRLETDGYV+DYVALL+AR++GLP TVFVEI L AQADEVL+AFE AVARVP+VLECHLMAGTADYILKV+AEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVF+TTALPV Sbjct: 3 LDETDKRILRVIQRRGRISNAELSEEVNLSPSACHRRVQRLETDGYVRDYVALLNARKLGLPTTVFVEITLNAQADEVLEAFETAVARVPAVLECHLMAGTADYILKVIAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFKTTALPV 152
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A0A238KXZ2_9RHOB (Leucine-responsive regulatory protein n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238KXZ2_9RHOB) HSP 1 Score: 263 bits (673), Expect = 1.460e-88 Identity = 132/150 (88.00%), Postives = 144/150 (96.00%), Query Frame = 1 Query: 1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 450 LDETD+RILRV+QRKGRISNADLSE V+LS SACHRRVQRLE +GY++DYVALLD RR+GLP TVFVEIKLTAQA+EVLDAFEKAV+RVP VLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFAL+TVF+TTALP+ Sbjct: 3 LDETDRRILRVLQRKGRISNADLSEEVHLSASACHRRVQRLEAEGYLRDYVALLDERRLGLPTTVFVEIKLTAQANEVLDAFEKAVSRVPDVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALKTVFKTTALPI 152
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: UPI001C389DB0 (Lrp/AsnC family transcriptional regulator n=1 Tax=Thalassococcus sp. CAU 1522 TaxID=2851652 RepID=UPI001C389DB0) HSP 1 Score: 263 bits (673), Expect = 1.460e-88 Identity = 132/150 (88.00%), Postives = 144/150 (96.00%), Query Frame = 1 Query: 1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 450 LDE D+RILR +Q+ GR+SNADLSE VNLSPSACHRRVQRLE DG ++DYVAL+DAR++GLPATVFVEIKL+AQADEVLDAFEKAVARVP+VLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVF+TTALPV Sbjct: 3 LDEIDRRILRALQKHGRMSNADLSEQVNLSPSACHRRVQRLEDDGLIRDYVALVDARKLGLPATVFVEIKLSAQADEVLDAFEKAVARVPAVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFKTTALPV 152
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A0A8J8B7M6_9RHOB (Lrp/AsnC family transcriptional regulator n=1 Tax=Aestuariicoccus sp. KMU-90 TaxID=2827239 RepID=A0A8J8B7M6_9RHOB) HSP 1 Score: 261 bits (666), Expect = 1.700e-87 Identity = 129/149 (86.58%), Postives = 144/149 (96.64%), Query Frame = 1 Query: 4 DETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 450 DETD RILR +QR+GR+SNADLSEAVNLSPSACHRRVQRLE++G+++DYVALLDAR+MGLP TVFVEI L+AQAD+VL+AFEKAVARVP+VLECHLMAGTADYILKV+A DTEDFARIHRQYLTRLPGVAQMQSSFALRTVF+TTALPV Sbjct: 4 DETDLRILRALQRRGRMSNADLSEAVNLSPSACHRRVQRLESEGFIRDYVALLDARKMGLPTTVFVEITLSAQADDVLEAFEKAVARVPAVLECHLMAGTADYILKVIAADTEDFARIHRQYLTRLPGVAQMQSSFALRTVFKTTALPV 152
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A3K3F9_9RHOB (Transcriptional regulator, AsnC family protein n=6 Tax=Roseobacteraceae TaxID=2854170 RepID=A3K3F9_9RHOB) HSP 1 Score: 260 bits (665), Expect = 3.880e-87 Identity = 129/150 (86.00%), Postives = 143/150 (95.33%), Query Frame = 1 Query: 1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 450 LDETD+R+LRV+QRKGR+SNADLSE VNLSPSACHRRVQRLE DGY++DYVALLDAR++ LP TVFVEI L AQADEVL+AFE AV+RVP+VLECHLMAGTADYILKVVAEDTED+ARIHRQYLTRLPGVAQMQSSFAL+TVF+TTALPV Sbjct: 17 LDETDRRLLRVLQRKGRMSNADLSEQVNLSPSACHRRVQRLEADGYIRDYVALLDARKLSLPTTVFVEITLQAQADEVLEAFETAVSRVPAVLECHLMAGTADYILKVVAEDTEDYARIHRQYLTRLPGVAQMQSSFALKTVFKTTALPV 166
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: A0A7W6GSQ7_9RHOB (Lrp/AsnC family leucine-responsive transcriptional regulator n=1 Tax=Sagittula marina TaxID=943940 RepID=A0A7W6GSQ7_9RHOB) HSP 1 Score: 259 bits (661), Expect = 9.840e-87 Identity = 128/150 (85.33%), Postives = 143/150 (95.33%), Query Frame = 1 Query: 1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 450 LDETD+RIL+V+QRKGR+SNA+LSE VNLS SACHRRVQRLETDGY++DYVAL+DAR+MGLP TVFVEI L+ QAD+VLDAFE AV RVP+VLECHLMAGTADYILKV+A+DTEDFARIHRQYLTRLPGVAQMQSSFALRTVF+TTALPV Sbjct: 3 LDETDRRILKVLQRKGRMSNAELSEHVNLSASACHRRVQRLETDGYIRDYVALVDARKMGLPTTVFVEITLSTQADDVLDAFETAVQRVPAVLECHLMAGTADYILKVIAQDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFKTTALPV 152
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Match: X6KWG5_9RHOB (AsnC family transcriptional regulator n=1 Tax=Rhodobacteraceae bacterium PD-2 TaxID=1169855 RepID=X6KWG5_9RHOB) HSP 1 Score: 259 bits (661), Expect = 9.840e-87 Identity = 130/150 (86.67%), Postives = 142/150 (94.67%), Query Frame = 1 Query: 1 LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYVALLDARRMGLPATVFVEIKLTAQADEVLDAFEKAVARVPSVLECHLMAGTADYILKVVAEDTEDFARIHRQYLTRLPGVAQMQSSFALRTVFRTTALPV 450 LDETD+RILRV+QR+GRISNADLS AVNLS S+CHRRVQRLE +GYV+DYVALLDARR+G+P TVFVEI L+AQADEVL+AFE AVARVP VLECHLMAGTADYILK+VA DTEDFARIHRQYLTRLPGVAQMQSSFALRTVF+TTALPV Sbjct: 3 LDETDRRILRVLQRRGRISNADLSGAVNLSASSCHRRVQRLEAEGYVRDYVALLDARRLGMPTTVFVEITLSAQADEVLEAFETAVARVPDVLECHLMAGTADYILKIVAADTEDFARIHRQYLTRLPGVAQMQSSFALRTVFKTTALPV 152 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10171.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10171.2.1 >prot_C-australica_Contig_10171.2.1 ID=prot_C-australica_Contig_10171.2.1|Name=mRNA_C-australica_Contig_10171.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=151bp LDETDKRILRVIQRKGRISNADLSEAVNLSPSACHRRVQRLETDGYVKDYback to top mRNA from alignment at C-australica_Contig_10171:383..835- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10171.2.1 ID=mRNA_C-australica_Contig_10171.2.1|Name=mRNA_C-australica_Contig_10171.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=453bp|location=Sequence derived from alignment at C-australica_Contig_10171:383..835- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10171:383..835- >mRNA_C-australica_Contig_10171.2.1 ID=mRNA_C-australica_Contig_10171.2.1|Name=mRNA_C-australica_Contig_10171.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=453bp|location=Sequence derived from alignment at C-australica_Contig_10171:383..835- (Chrysoparadoxa australica CS_1217)back to top |