prot_C-australica_Contig_1008.2.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1008.2.1
Unique Nameprot_C-australica_Contig_1008.2.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length306
Homology
BLAST of mRNA_C-australica_Contig_1008.2.1 vs. uniprot
Match: A0A6H5KHJ6_9PHAE (Rad51 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHJ6_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 9.990e-39
Identity = 103/284 (36.27%), Postives = 155/284 (54.58%), Query Frame = 0
Query:    1 MGVLSIQADETALSLFRRCNTVPFSTGISFLDGA------------GIVAGDVVEVYGPSPSGKSELLLNVVLQTVLPKEMGGRASRAVCVDLDGNLSVLRIEQMLRERVGASACFRA-----------GTMPIPDVALPAEVDPGSPEGRVTSVMLQCMQRIKFVSCQNHLQLIAAMEVLHYESAQEATLVVAIDSLGSLVGKSKLSDS----ALVLQNAALRATARLASERSVVVMAAKPALFANLGWGQGMGNRSGSKMEHWEYMPSAWQKVVSHRVMLQR 257
            M  LS+Q DETAL LFRR +  P  TG++F D              G+  GDVVE+YGPS SGKSE+L+NVV + V+P  +GG    AV  D DG LS+LR+EQ+L+ ++  +  F+            GT+     A P+ +     +  +  V++ C++R++ V      +L+AA+EVL +E      +VV +D +GS   + K++ S    A+ +Q    +A  RL  ER VV+ AAK         G+ +G+ +    EH EY+P  WQ+ V+ RV+LQR
Sbjct:    1 MMALSVQDDETALELFRRAHHKPLLTGLAFFDEVPAGSGSSKTKDKGVGRGDVVELYGPSGSGKSEVLINVVARCVMPAWLGGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGVGGGGGTIH----ASPSRLQ--QLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAVVV-VDGMGSFFWQDKMAQSCGGEAVSMQGIVAKALVRLTMERPVVLFAAKN--------GKDLGDAA---TEHREYLPQIWQRAVTFRVLLQR 266          
BLAST of mRNA_C-australica_Contig_1008.2.1 vs. uniprot
Match: D7FPE2_ECTSI (Rad51 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE2_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 3.940e-29
Identity = 74/201 (36.82%), Postives = 110/201 (54.73%), Query Frame = 0
Query:    1 MGVLSIQADETALSLFRRCNTVPFSTGISFLDGA------------GIVAGDVVEVYGPSPSGKSELLLNVVLQTVLPKEMGGRASRAVCVDLDGNLSVLRIEQMLRERVGASACFRA-----GTMPIPDVALPAEVDPGSPEGRVTSVMLQCMQRIKFVSCQNHLQLIAAMEVLHYESAQEATLVVAIDSLGSLVGKSKL 184
            M  LS+Q DETAL LFRR N  P  TG++F D              G+  GDVVE+YGPS SGKSE+L+NVV + V+P  +GG    AV  D DG LS+LR+EQ+L+ ++  +  F+      G          +   P   +  +  V++ C++R++ V      +L+AA+EVL +E      +VV +D +GS   + K+
Sbjct:    1 MMALSVQDDETALELFRRANHKPLLTGLAFFDEVPAGSGGSKTKDKGVGRGDVVELYGPSGSGKSEVLINVVARCVMPAWLGGEERPAVFFDNDGRLSILRLEQLLKGKISNNTTFQVKSASGGIGXXXXXXHASSSRPQQLQSDLEDVLIGCLRRLRVVRPAGLFELLAAIEVLRFELGHRPAVVV-VDGMGSFFWQDKV 200          
BLAST of mRNA_C-australica_Contig_1008.2.1 vs. uniprot
Match: A0A1Y1IMM9_KLENI (DNA recombination and repair protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IMM9_KLENI)

HSP 1 Score: 93.2 bits (230), Expect = 6.520e-18
Identity = 87/341 (25.51%), Postives = 143/341 (41.94%), Query Frame = 0
Query:    6 IQADETALSLFRRCNTVPFSTGISFLDGAGIVAGDVVEVYGPSPSGKSELLLNVVLQTVLPKEM-----GGRASRAVCVDLDGNLSVLRIEQMLRERVGASACFRAGTMPIPDVALPAEVDPGSPEGRVTSVMLQCMQRIKFVSCQNHLQLIAAMEVLHYESAQ-------EATLVVAIDSLGSLVGKSK-----------LSDSALVLQNAALRATARLASERSVVVMAAKPALFANLGW---GQGMGNRSGSKME---------------------HWEYMPSAWQKVVSHRVMLQ--RVPDQGEGQ-----GFTLFNACVVQPHEGRAAEALVMSADP 292
            +Q DE+      R    P  T + F+D A I  G+VVE++G S SGK+E+L   V   +LP E+     GG    A+  DLDG   +LR+ ++L  R+  +   + G           + D       ++ V    ++R + + C N   L+AA+++L  E  Q       ++  ++ IDS+G+     K           L+ S L    A +     +      +++A K A+ A   W   G G    SG   +                     H EYMP+ WQ  V+HR++LQ    PD G        G  +F+A   +P     A+ +++  +P
Sbjct:   16 LQPDESMRDFLLRTFVEPLGTSVPFIDSAAIRPGNVVEIFGASGSGKTEILTQAVATCILPSEVDGVGYGGAGGAALFFDLDGRFDILRLVRILESRINEAQVAQGG----------GDAD------ALSQVFTASLRRFRLLHCHNSFHLLAALKMLQPEIRQIVQNHGPDSLHLICIDSIGAFHWLDKGLHLWAGHRDALTQSGL--SKAVVTELKHIMKRHRPLMLATKSAIGAPNRWRPYGSGSTTASGRSPQEGARGSHEDEDPELPQKAVLYHKEYMPAVWQDFVTHRLVLQGPASPDPGGPHQQALLGPPVFSAQWEKPPGSDIAKFVILDVNP 338          
BLAST of mRNA_C-australica_Contig_1008.2.1 vs. uniprot
Match: W7U480_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U480_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.260e-17
Identity = 98/310 (31.61%), Postives = 138/310 (44.52%), Query Frame = 0
Query:   33 GAGIVAGDVVEVYGPSPSGKSELLLNVVLQTVLPKEMGGRASRAVCVDLDGNLSVLRIEQMLRERV------------------------GASAC-----------FRAGTMP---IPDVALPAEVDPGSPEGRVTSVMLQC-MQRIKFVSCQNHLQLIAAMEVLHY-----ESAQEATLVVAIDSLGSLVGKSKLSDSALVLQNA----ALRATARLASERSVVVMAAKPALFANL----------GWGQGMGNRSGSKMEHWEYMPSAWQKVVSHRVMLQRVPDQGEGQGFTLFNACVV-----QPHE 279
            G G++ G V+E+YG S SGK+E+ LN V   VLP++  G    AV VD+D  + V R+  +L  R+                        G S             FRA TM     PD A   +    +P      V  Q  M ++  V C + L+  + +E L Y     E A   TLVV +DSLGS   + K ++S    Q+       R   R+A  ++V V+A KPALFA            G  +G G      +EH EYMP  W ++V+HR+ L  V + GEG    +F+A  V     QPH+
Sbjct:   68 GGGLLPGTVLELYGASGSGKTEVALNAVCGWVLPRKFSGVGGVAVVVDMDFRVDVRRLRCLLLGRIRKALQLGQGGWDERRQGTKRKWSNGESETSYGQGISGNNGFRATTMGSIGTPDSAGACQGGEDTP-----FVWTQAAMDQVVLVRCVDDLEAFSVLETLKYDLDRGEGAGTPTLVV-LDSLGSCFYERKAAESCHQGQSCFDYMIARCIGRMAQSQAVSVIACKPALFAGQRTVHEGGKEGGKEEGNGRYRYPGLEHKEYMPGQWSRLVTHRLTL--VKEGGEGGREAVFSARAVLLGALQPHQ 369          
BLAST of mRNA_C-australica_Contig_1008.2.1 vs. uniprot
Match: A0A445A873_ARAHY (RECA_2 domain-containing protein n=11 Tax=Arachis TaxID=3817 RepID=A0A445A873_ARAHY)

HSP 1 Score: 91.7 bits (226), Expect = 1.280e-17
Identity = 77/287 (26.83%), Postives = 127/287 (44.25%), Query Frame = 0
Query:    6 IQADETALSLFRRCNTVPFSTGISFLDGAGIVAGDVVEVYGPSPSGKSELLLNVVLQTVLPKEM-----GGRASRAVCVDLDGNLSVLRIEQMLRERVGASACFRAGTMPIPDVALPAEVDPGSPEGRVTSVMLQCMQRIKFVSCQNHLQLIAAMEVLHYESAQE-----ATLVVAIDSLGSLVGKSKLS---------DSALVLQN---AALRATARLASERSVVVMAAKPALFANL---------GWGQGMGNRSGSKMEHWEYMPSAWQKVVSHRVMLQRVPDQ 261
            I  DETA  + RR + +  +  +  L    +  G+V+E++GPSPS K+++L+ V +  VLPKE      GG     + +DLD    + R  QML  R+            + D+                     CMQR  +  C N  + +  ++ LHY   +E     +  ++ IDS+G+     + S            L LQ+   A ++   +L     ++V+A K  +F N          G  + +  RS   +++ EYMPS WQ  V+HR++L+R  DQ
Sbjct:   16 IDGDETAHYMLRRISALRSTLLVPPLHRVPLRLGNVIEIFGPSPSAKTQILIQVAINCVLPKEWNGVRYGGFDHSVLFLDLDCRFDISRFSQMLTHRIMEGNAIGDCDKTLYDL---------------------CMQRFLYARCSNSFEFLQTLKSLHYRLKREKDHGVSVQLLLIDSIGAFHWVDRASMFLSLKEHNRKKLFLQSVSEAVVQDIKKLLQVHPMLVIATKSVIFGNTYSTASEEVNGCSRNV-TRSPQHIQYREYMPSVWQSFVTHRILLRRSDDQ 280          
BLAST of mRNA_C-australica_Contig_1008.2.1 vs. uniprot
Match: A0A059Q132_9POAL (RECA_2 domain-containing protein n=2 Tax=Saccharinae TaxID=1648026 RepID=A0A059Q132_9POAL)

HSP 1 Score: 91.3 bits (225), Expect = 1.830e-17
Identity = 87/279 (31.18%), Postives = 128/279 (45.88%), Query Frame = 0
Query:    6 IQADETALS-LFRRCNTVPFSTGISFLDGAGIVAGDVVEVYGPSPSGKSELLLNVVLQTVLPKE-----MGGRASRAVCVDLDGNLSVLRIEQMLRERVGASACFRAGTMPIPDVALPAEVDPGSPEGRVTSVMLQC----------MQRIKFVSCQNHLQLIAAMEVLHYESAQEAT----LVVAIDSLGSLVGKSKLSDSALVLQNAALRATARLASERSVVVMAAKPALFANLG---WGQGMG-----NRSGSKMEHWEYMPSAWQKVVSHRVMLQ 256
            +  +ETA++ L R  ++ P  T    L  A +  G+VVE+ GPS SGKS LLL   +Q +LPKE      GG     + +DLD    VLR+ Q+LR R+ A  C  A             +  G PE   T    QC          MQR  +  C N L+ IAA++ +  +S +E +      V IDS+G+     + S  A   +   L++           ++  +PAL        +G+G       NR   ++ + EYMPS WQ  V+HR+ LQ
Sbjct:   13 LAVNETAVAFLSRSLSSRPPITLPPPLHRAPLRPGNVVEIAGPSNSGKSHLLLMAAVQCILPKEWEGIYFGGLGRAVMYLDLDCRFDVLRLVQILRNRI-AKGCRSA------------HLRNGDPENDGTKDEFQCSLENTLFSDCMQRFLYARCCNSLEFIAALKTVQSQSRREVSGAGIYFVMIDSIGAFYWIDRGSQPARENKGRTLQSITESVVHELRKLLQLQPALVLVTKAPIYGEGTTTANDFNRGKKELSNREYMPSIWQSFVTHRINLQ 278          
BLAST of mRNA_C-australica_Contig_1008.2.1 vs. uniprot
Match: A0A8B7BQY3_PHODC (DNA repair protein XRCC2 homolog isoform X5 n=5 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B7BQY3_PHODC)

HSP 1 Score: 90.9 bits (224), Expect = 2.030e-17
Identity = 86/300 (28.67%), Postives = 137/300 (45.67%), Query Frame = 0
Query:    6 IQADETALSLFRRCNTVPFSTGISFLDGAGIVAGDVVEVYGPSPSGKSELLLNVVLQTVLPKE-----MGGRASRAVCVDLDGNLSVLRIEQMLRERVGASACFRAGTMPIPDVALPAEVDPGSPEGRVTSV-------MLQCMQRIKFVSCQNHLQLIAAMEVLHYESAQEATLV------VAIDSLGSL-----------VGKSKLSDSALVLQNAA---LRATARLASERSVVVMAAKPALF--------ANLGWGQGMGNRS---------GSKMEHWEYMPSAWQKVVSHRVMLQ 256
            I  DETA ++  R  T      +  L    +  G+VVE+ GPSPS KS++LL+  +  +LP+E      GG     +  DLD    VLR+ Q+L+ R+   A   A +    D     + D       +T +        L CM+R  ++ C +  + +AA++ +H+   +E+  +      + IDS+G+            +G SK  +  L LQN A   ++   +L   + V+V+A K  +F        A   +G+    R          G K+ + EYMPSAWQ  V+HRV LQ
Sbjct:    9 IHGDETAKAMLARVLTERPFLFLPPLHRVPLRVGNVVEIAGPSPSAKSQILLHAAVHCILPEEWKGIRFGGLERMVMYFDLDCRFDVLRLSQILKHRI-MEAYKSANSTYWEDNGEYQKYD----ATEITQMCFCDDELFLACMRRFLYIRCYSSFEFLAALKAMHFHLQRESEALGVGLHFLMIDSIGAFYWIDRACQPMPIGGSKRKN--LSLQNVAEAVVQEICKLLQTQPVLVLATKATIFGAGTSGNDAQRAFGKWCSERKMDSRTLSKEGEKLLYREYMPSAWQSFVTHRVRLQ 301          
BLAST of mRNA_C-australica_Contig_1008.2.1 vs. uniprot
Match: A0A6G1CQT2_9ORYZ (RECA_2 domain-containing protein n=2 Tax=Oryza TaxID=4527 RepID=A0A6G1CQT2_9ORYZ)

HSP 1 Score: 89.4 bits (220), Expect = 1.160e-16
Identity = 87/301 (28.90%), Postives = 134/301 (44.52%), Query Frame = 0
Query:    6 IQADETALS-LFRRCNTVPFSTGISFLDGAGIVAGDVVEVYGPSPSGKSELLLNVVLQTVLPKE-----MGGRASRAVCVDLDGNLSVLRIEQMLRERVGASACFRAGTMPIPDVALPAEVDPGSPEGRVTSVMLQCMQRIKFVSCQNHLQLIAAMEVLHYESAQEATLV------VAIDSLGSLVGKSKLSDSALVLQNAALRATARLASE------------RSVVVMAAKPALFANLGWGQG-------------------MGNRSGSKMEHWEYMPSAWQKVVSHRVMLQRVPDQGE 263
            +  DETA + L R  +  P       L  A +  G+VVE+ GPS SGKS+LLL   +Q +LPKE     +GG     + +DLD    VLR+ QMLR R+ A  C    T    +     +   GS E  + S    CM+R  +  C N    IAA++ +H +S  ++ ++      + IDS+GS     +  DS  + +N     + +  +E            + V+VMA K  ++   G+  G                    G      + + E+MPS WQ  V+HR+ LQ +  + E
Sbjct:   13 LSVDETAAAFLSRSLSARPPILLPPPLHRAPLRPGNVVEIAGPSNSGKSQLLLTAAVQCILPKEWKGAYLGGLGKAVMYLDLDCRFDVLRLAQMLRNRI-AECC--GSTNSTNEEFAKDDATNGSAENTLFS---DCMKRFLYARCYNSSDFIAALQNMHSQSQAKSKVLSVGIYFLMIDSIGSFYWMDR--DSQPITENKGRTLSLQSMTEIVVQKLRNFLQLQPVLVMATKAPIYGE-GFMAGNDFPRGTSKQTSEDSTMRCAGQEEEKNISYREFMPSVWQSFVTHRIKLQDLGQEAE 304          
BLAST of mRNA_C-australica_Contig_1008.2.1 vs. uniprot
Match: A0A2G9GVI2_9LAMI (DNA repair protein, member of the recA/RAD51 family n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GVI2_9LAMI)

HSP 1 Score: 88.6 bits (218), Expect = 1.490e-16
Identity = 79/291 (27.15%), Postives = 129/291 (44.33%), Query Frame = 0
Query:    6 IQADETAL-SLFRRCNTVPFSTGISFLDGAGIVAGDVVEVYGPSPSGKSELLLNVVLQTVLPKEM-----GGRASRAVCVDLDGNLSVLRIEQMLRERVGASACFRAGTMPIPDVALPAEVDPGSPEGRVTSVMLQCMQRIKFVSCQNHLQLIAAMEVLHYESAQE------ATLVVAIDSLGSLVGKSKLSDSA---------LVLQNAA---LRATARLASERSVVVMAAKPALFANLGWGQGMGNRS--GSKMEHWEYMPSAWQKVVSHRVMLQRVPDQGEGQGFTLF 270
            I+ADETA  +L R     P       L    +  G+VVE+ GPSPS K+ +L+   +  +LPKE      GG     + VDL+    VL   + L  R+  +   R+                G+ +     +   CM+R  +  C N  + +A ++ LHY   +E      A  ++ IDS+G+     + + S+         L LQ  A   ++   RL     ++V+AAK  + A    G+    ++       H +YMPS WQ +VSHR++L+   D+ + Q   +F
Sbjct:    8 IKADETAKEALVRILTERPVVVLPPPLHRLPLRVGNVVEIVGPSPSAKTLILIQAAISCILPKEWKSEQYGGLERAVLFVDLECRFDVLSFSRALERRIIGANGLRSSMK-------------GNEKDYDKELFAACMKRFLYTRCYNSFEFLATLKTLHYRLQKEKEKQGGAVYMLMIDSIGAFYWVDRAAPSSSTGKNNRKSLSLQTVAESVVQEIQRLLLVNPMLVLAAKSTIEAIRNPGKWSDEKAVGARNQSHRDYMPSVWQSLVSHRILLRGSDDERKYQNHPIF 285          
BLAST of mRNA_C-australica_Contig_1008.2.1 vs. uniprot
Match: A0A1W0W0R8_SORBI (RECA_2 domain-containing protein n=10 Tax=Andropogoneae TaxID=147429 RepID=A0A1W0W0R8_SORBI)

HSP 1 Score: 84.3 bits (207), Expect = 1.080e-14
Identity = 94/316 (29.75%), Postives = 143/316 (45.25%), Query Frame = 0
Query:    6 IQADETALS-LFRRCNTVPFSTGISFLDGAGIVAGDVVEVYGPSPSGKSELLLNVVLQTVLPKE-----MGGRASRAVCVDLDGNLSVLRIEQMLRERVGA---SACFRAGTMPIPDVALPAEVDPGSPEGRVTSVMLQCMQRIKFVSCQNHLQLIAAMEVLHYESAQEAT----LVVAIDSLGSLVGKSKLSDSALVLQNAALRATA--------RLASERSVVVMAAKPALFAN----------------LGWGQGMG-NRSGSK--MEHWEYMPSAWQKVVSHRVMLQ----RVPDQGEGQGFTLFNACVVQP 277
            +  +ETA + L R  ++ P  T    L  A +  G+VVE+ GPS SGKS LLL   +Q +LPKE      GG     + +DLD    VLR+ Q+LR R+     SA  R G  P P+     +    S E  + S    CMQR  +  C N  + IAA++ +  +S +E +      V IDS+G+     + S  A   +   L++          +L   +  +V+  K  ++                  LG   G+G +R G +  + + EYMPS WQ  ++HR+ LQ     VP   E +   +  +  VQP
Sbjct:   75 LAVNETAAAFLSRSLSSWPPITLPPPLHRAPLRPGNVVEIAGPSNSGKSHLLLMAAVQCILPKEWEGIYFGGLGRAVMYLDLDCRFDVLRLAQILRNRIAEGCRSAHLRNGD-PEPENNGTKDEFQCSLENTLFS---DCMQRFLYARCCNSPEFIAALKTVQSQSRREVSGAGIYFVMIDSIGAFYWIDRGSQPARENKGRTLQSITESVVHELRKLLQLQPALVLVTKAPIYGEGTTTANDFNRVSSKYMLGDSTGLGYSRQGEEKTVSNREYMPSIWQSFITHRINLQVEEAEVPSVLESEVLPMHTSEWVQP 386          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1008.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHJ6_9PHAE9.990e-3936.27Rad51 domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FPE2_ECTSI3.940e-2936.82Rad51 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A1Y1IMM9_KLENI6.520e-1825.51DNA recombination and repair protein n=1 Tax=Klebs... [more]
W7U480_9STRA1.260e-1731.61Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A445A873_ARAHY1.280e-1726.83RECA_2 domain-containing protein n=11 Tax=Arachis ... [more]
A0A059Q132_9POAL1.830e-1731.18RECA_2 domain-containing protein n=2 Tax=Saccharin... [more]
A0A8B7BQY3_PHODC2.030e-1728.67DNA repair protein XRCC2 homolog isoform X5 n=5 Ta... [more]
A0A6G1CQT2_9ORYZ1.160e-1628.90RECA_2 domain-containing protein n=2 Tax=Oryza Tax... [more]
A0A2G9GVI2_9LAMI1.490e-1627.15DNA repair protein, member of the recA/RAD51 famil... [more]
A0A1W0W0R8_SORBI1.080e-1429.75RECA_2 domain-containing protein n=10 Tax=Andropog... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013632DNA recombination and repair protein Rad51-like, C-terminalPFAMPF08423Rad51coord: 16..97
e-value: 6.4E-8
score: 32.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 21..294
e-value: 2.7E-28
score: 101.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 23..213
IPR030547DNA repair protein XRCC2PANTHERPTHR46644DNA REPAIR PROTEIN XRCC2coord: 5..261
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainPROSITEPS50162RECA_2coord: 20..305
score: 11.220494

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1008contigC-australica_Contig_1008:6797..9181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1008.2.1mRNA_C-australica_Contig_1008.2.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1008 6702..9292 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1008.2.1 ID=prot_C-australica_Contig_1008.2.1|Name=mRNA_C-australica_Contig_1008.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=306bp
MGVLSIQADETALSLFRRCNTVPFSTGISFLDGAGIVAGDVVEVYGPSPS
GKSELLLNVVLQTVLPKEMGGRASRAVCVDLDGNLSVLRIEQMLRERVGA
SACFRAGTMPIPDVALPAEVDPGSPEGRVTSVMLQCMQRIKFVSCQNHLQ
LIAAMEVLHYESAQEATLVVAIDSLGSLVGKSKLSDSALVLQNAALRATA
RLASERSVVVMAAKPALFANLGWGQGMGNRSGSKMEHWEYMPSAWQKVVS
HRVMLQRVPDQGEGQGFTLFNACVVQPHEGRAAEALVMSADPTRWLVSDR
GVHNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013632DNA_recomb/repair_Rad51_C
IPR027417P-loop_NTPase
IPR030547XRCC2
IPR020588RecA_ATP-bd