prot_C-australica_Contig_10067.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-australica_Contig_10067.1.1
Unique Name	prot_C-australica_Contig_10067.1.1
Type	polypeptide
Organism	Chrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length	257

Homology

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BLAST of mRNA_C-australica_Contig_10067.1.1 vs. uniprot
Match: A0A2E3NQR2_9GAMM (Fis family transcriptional regulator n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A2E3NQR2_9GAMM)

HSP 1 Score: 332 bits (851), Expect = 2.160e-109
Identity = 172/270 (63.70%), Postives = 214/270 (79.26%), Query Frame = 0

Query:    1 RPFVAVNCAAIPSELLESELFGHEKGAFSGAISRREGRFEMAEGGTLFLDEIGDMSLPMQVKVLRVLQERSYERVGGNEPRSCDVRLIAATHRDLEAMIKQGSFREDLYYRLDVFPIELPPLRDRLADLSILINEINRCHRANGRASVTLTPAALAALGTGAWPGNIRELSNLLERLAVLYPDEHVDEDRLPPRYQRRT---------------EPGTPPKAPATLPPEGIDLKAHMASVEVSLIQAALDKTNGVIAHAADLLHLRRTTL 255
            +PFVAVNC AIP++LLESELFGHEKGAF+GA+++R GRFE+AEGGTLFLDEIGDMSLPMQVK+LRVLQERS+ERVGGN+ + CDVR+IAATHRDLE+ I  G FREDL+YRL+VFP+E+P L DR+ADL  L++++    +A+GR  V L+  A+AAL   AWPGN+REL+NL+ERL+VL+P + V+ D LP RYQ                  EPG P +AP+ LP  GIDL+ HMASVE++LI+ ALD +NGV+AHAA LLHLRRTTL
Sbjct:  182 KPFVAVNCGAIPADLLESELFGHEKGAFTGAVAQRRGRFELAEGGTLFLDEIGDMSLPMQVKILRVLQERSFERVGGNDTKQCDVRIIAATHRDLESRIVSGDFREDLFYRLNVFPVEMPRLTDRIADLPRLVDDLIASLQADGRGDVALSEQAVAALQQYAWPGNVRELANLVERLSVLHPGQCVEVDELPERYQPAAMATASQAGVLADLTAEPG-PARAPS-LPESGIDLRDHMASVEMALIRQALDASNGVVAHAATLLHLRRTTL 449

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BLAST of mRNA_C-australica_Contig_10067.1.1 vs. uniprot
Match: A0A1E2UTJ7_9GAMM (Sigma-54-dependent Fis family transcriptional regulator n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1E2UTJ7_9GAMM)

HSP 1 Score: 325 bits (832), Expect = 3.950e-106
Identity = 169/271 (62.36%), Postives = 207/271 (76.38%), Query Frame = 0

Query:    1 RPFVAVNCAAIPSELLESELFGHEKGAFSGAISRREGRFEMAEGGTLFLDEIGDMSLPMQVKVLRVLQERSYERVGGNEPRSCDVRLIAATHRDLEAMIKQGSFREDLYYRLDVFPIELPPLRDRLADLSILINEINRCHRANGRASVTLTPAALAALGTGAWPGNIRELSNLLERLAVLYPDEHVDEDRLPPRYQRRTE----------------PGTPPKAPATLPPEGIDLKAHMASVEVSLIQAALDKTNGVIAHAADLLHLRRTTL 255
            +PFV VNC AIP +LLESELFGHEKGAF+GAIS R+GRFEMAEGGTLFLDEIGDMS+PMQVK+LRVLQERS+ERVG N+   C+VR+IAATHR+LE+ IK G FREDL+YRL+VFPIE+PPLRDR+ D+ +L+N++        R SV LTPAA+AAL    WPGN+REL+NL+ERLA+LYP   VD   LP +++   E                PGT   AP  LP +GIDLKAH+ S+E SLIQ ALD+++G++AHAA  LH+RRTTL
Sbjct:  203 KPFVPVNCGAIPGDLLESELFGHEKGAFTGAISARQGRFEMAEGGTLFLDEIGDMSMPMQVKLLRVLQERSFERVGSNKTIPCNVRIIAATHRNLESAIKNGDFREDLFYRLNVFPIEMPPLRDRVEDIPVLVNDLIHRIENEKRGSVRLTPAAIAALSHYRWPGNVRELANLIERLAILYPYGVVDIGELPEKFKPAAELIDTTKLPQVSLEGDEPGTTQNAPR-LPNDGIDLKAHLNSLEQSLIQQALDESDGIVAHAAKRLHMRRTTL 472

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BLAST of mRNA_C-australica_Contig_10067.1.1 vs. uniprot
Match: A0A383XPI8_9GAMM (Sigma-54-dependent Fis family transcriptional regulator n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A383XPI8_9GAMM)

HSP 1 Score: 322 bits (825), Expect = 1.940e-105
Identity = 167/270 (61.85%), Postives = 209/270 (77.41%), Query Frame = 0

Query:    1 RPFVAVNCAAIPSELLESELFGHEKGAFSGAISRREGRFEMAEGGTLFLDEIGDMSLPMQVKVLRVLQERSYERVGGNEPRSCDVRLIAATHRDLEAMIKQGSFREDLYYRLDVFPIELPPLRDRLADLSILINEINRCHRANGRASVTLTPAALAALGTGAWPGNIRELSNLLERLAVLYPDEHVDEDRLPPRYQRRT--EPGTPPK-------------APATLPPEGIDLKAHMASVEVSLIQAALDKTNGVIAHAADLLHLRRTTL 255
            +PFVAVNC AIP++LLESELFGHEKGAF+GA+++R GRFE+AEGGTLFLDEIGDMSLPMQVK+LRVLQERS+ERVGGNE + CDVR+IAATHRDLE+ I  G FREDL+YRL+VFP+E+P L DR+ DL  L++++    +A+GR  V L   A++AL   AWPGN+REL+NL+ERL+VL+P + V  D LP RYQ  +  +  TP +                +LP  GIDL+ HMASVE++LI+ ALD +NGV+AHAA LLHLRRTTL
Sbjct:  182 KPFVAVNCGAIPADLLESELFGHEKGAFTGAVAQRRGRFELAEGGTLFLDEIGDMSLPMQVKILRVLQERSFERVGGNETKQCDVRIIAATHRDLESRIVSGDFREDLFYRLNVFPVEMPRLTDRIDDLPRLVDDLIASLQADGRGDVALDARAVSALQQYAWPGNVRELANLVERLSVLHPGQTVGVDDLPARYQPESAGDEVTPAELLGVNGSSAGVAATQPSLPDAGIDLRDHMASVEMALIRQALDASNGVVAHAAQLLHLRRTTL 451

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BLAST of mRNA_C-australica_Contig_10067.1.1 vs. uniprot
Match: A0A6I7N6J6_9GAMM (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Thioalkalivibrio sp. TaxID=2093813 RepID=A0A6I7N6J6_9GAMM)

HSP 1 Score: 318 bits (814), Expect = 1.990e-103
Identity = 163/267 (61.05%), Postives = 200/267 (74.91%), Query Frame = 0

Query:    1 RPFVAVNCAAIPSELLESELFGHEKGAFSGAISRREGRFEMAEGGTLFLDEIGDMSLPMQVKVLRVLQERSYERVGGNEPRSCDVRLIAATHRDLEAMIKQGSFREDLYYRLDVFPIELPPLRDRLADLSILINEINRCHRANGRASVTLTPAALAALGTGAWPGNIRELSNLLERLAVLYPDEHVDEDRLPPRYQRRTEPGTP------------PKAPATLPPEGIDLKAHMASVEVSLIQAALDKTNGVIAHAADLLHLRRTTL 255
            RPFVAVNC AIP++LLESELFGHEKGAF+GA++ R+GRFEMAEGGTLFLDEIGDM LPMQVK+LRVLQER+ ERVG N   +CDVR++AATHRDLE  I+ G FREDL+YRL+VFPIE+PPLR RL DL +LI E+       GR +V L P+AL  L    WPGN+REL+NL+ERLA+L+P E V  + LPP++ R+ +PG P            P     LP +GIDLK ++  +EV LI+ ALD  +GV+AHAA LL +RRTTL
Sbjct:  206 RPFVAVNCGAIPADLLESELFGHEKGAFTGALTARQGRFEMAEGGTLFLDEIGDMPLPMQVKLLRVLQERTIERVGSNRSIACDVRIVAATHRDLEVAIEDGDFREDLFYRLNVFPIEMPPLRQRLGDLPLLITELTARMEGEGRRTVRLGPSALRVLSVYPWPGNVRELANLIERLAILHPGETVQAEDLPPKF-RQGQPGAPEDFDTPQIADPGPGTETPLPQDGIDLKEYLNELEVGLIRRALDDASGVVAHAAKLLGMRRTTL 471

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BLAST of mRNA_C-australica_Contig_10067.1.1 vs. uniprot
Match: G2DFT5_9GAMM (DNA-binding regulatory protein for nitrogen fixation n=5 Tax=sulfur-oxidizing symbionts TaxID=32036 RepID=G2DFT5_9GAMM)

HSP 1 Score: 318 bits (814), Expect = 2.050e-103
Identity = 168/271 (61.99%), Postives = 207/271 (76.38%), Query Frame = 0

Query:    1 RPFVAVNCAAIPSELLESELFGHEKGAFSGAISRREGRFEMAEGGTLFLDEIGDMSLPMQVKVLRVLQERSYERVGGNEPRSCDVRLIAATHRDLEAMIKQGSFREDLYYRLDVFPIELPPLRDRLADLSILINEINRCHRANGRASVTLTPAALAALGTGAWPGNIRELSNLLERLAVLYPDEHVDEDRLPPRYQ----------------RRTEPGTPPKAPATLPPEGIDLKAHMASVEVSLIQAALDKTNGVIAHAADLLHLRRTTL 255
            +PFV VNC AIP++LLESELFGHEKGAF+GAIS R+GRFEMAEGGTLFLDEIGDMS+PMQVK+LRVLQERS+ERVG N+P   +VR++AATHR+LE  I+  SFREDLYYRL+VFPIE+PPLR R+ D+ +L+ ++ R      R SV LTPAA+AAL    WPGN+REL+NL+ERLA+LYP   VD   LP +++                R +EP T   AP  LP EGIDLKAH++++E SLIQ ALD++ GV+AHAA  LH+RRTTL
Sbjct:  203 KPFVPVNCGAIPADLLESELFGHEKGAFTGAISSRQGRFEMAEGGTLFLDEIGDMSMPMQVKLLRVLQERSFERVGSNKPIKSNVRILAATHRNLEKAIEDNSFREDLYYRLNVFPIEMPPLRARVEDIPVLVTDLIRRIENEKRGSVRLTPAAVAALSHYRWPGNVRELANLIERLAILYPYGVVDVADLPDKFRPVGNLVDTVQLPEVAIRGSEPDTVVHAPR-LPNEGIDLKAHLSTLEQSLIQQALDESEGVVAHAAKRLHMRRTTL 472

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BLAST of mRNA_C-australica_Contig_10067.1.1 vs. uniprot
Match: A0A2U0A650_9GAMM (Sigma-54-dependent Fis family transcriptional regulator n=2 Tax=gamma proteobacterium symbiont of Ctena orbiculata TaxID=1968598 RepID=A0A2U0A650_9GAMM)

HSP 1 Score: 317 bits (813), Expect = 2.980e-103
Identity = 164/271 (60.52%), Postives = 207/271 (76.38%), Query Frame = 0

Query:    1 RPFVAVNCAAIPSELLESELFGHEKGAFSGAISRREGRFEMAEGGTLFLDEIGDMSLPMQVKVLRVLQERSYERVGGNEPRSCDVRLIAATHRDLEAMIKQGSFREDLYYRLDVFPIELPPLRDRLADLSILINEINRCHRANGRASVTLTPAALAALGTGAWPGNIRELSNLLERLAVLYPDEHVDEDRLPPRYQ----------------RRTEPGTPPKAPATLPPEGIDLKAHMASVEVSLIQAALDKTNGVIAHAADLLHLRRTTL 255
            +PFV VNC AIP++LLESELFGHEKGAF+GAIS R+GRFEMAE GTLFLDEIGDMS+PMQVK+LRVLQER++ERVG ++  +C+VR+IAATHR+LE  IK G FREDL+YRL+VFPIE+PPLRDR+ D+ +L+N++        R SV LTPAA+AAL    WPGN+REL+NL+ERLA+L+P   VD   LP +++                   EPGT   AP  LP +G+DLKAH+ S+E SLIQ ALD+++G++AHAA  LH+RRTTL
Sbjct:  204 KPFVPVNCGAIPADLLESELFGHEKGAFTGAISARQGRFEMAENGTLFLDEIGDMSMPMQVKLLRVLQERTFERVGSSKTMACNVRIIAATHRNLEEAIKNGDFREDLFYRLNVFPIEMPPLRDRVEDIPVLVNDLIHRIENEKRGSVRLTPAAIAALSHYRWPGNVRELANLIERLAILHPYGVVDVSDLPDKFRPLGDLHEMTQLPQVTIEGEEPGTTVNAPR-LPNDGLDLKAHLNSLEQSLIQQALDESDGIVAHAAKRLHMRRTTL 473

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BLAST of mRNA_C-australica_Contig_10067.1.1 vs. uniprot
Match: A0A2U0A8D0_9GAMM (Sigma-54-dependent Fis family transcriptional regulator n=2 Tax=gamma proteobacterium symbiont of Ctena orbiculata TaxID=1968598 RepID=A0A2U0A8D0_9GAMM)

HSP 1 Score: 317 bits (813), Expect = 4.120e-103
Identity = 166/271 (61.25%), Postives = 205/271 (75.65%), Query Frame = 0

Query:    1 RPFVAVNCAAIPSELLESELFGHEKGAFSGAISRREGRFEMAEGGTLFLDEIGDMSLPMQVKVLRVLQERSYERVGGNEPRSCDVRLIAATHRDLEAMIKQGSFREDLYYRLDVFPIELPPLRDRLADLSILINEINRCHRANGRASVTLTPAALAALGTGAWPGNIRELSNLLERLAVLYPDEHVDEDRLPPRYQ----------------RRTEPGTPPKAPATLPPEGIDLKAHMASVEVSLIQAALDKTNGVIAHAADLLHLRRTTL 255
            +PFV VNC AIP +LLESELFGHEKGAF+GAIS R+GRFEMAEGGTLFLDEIGDMS+PMQVK+LRVLQER++ERVG N    C+VR+IAATHR+LE  IK G FREDL+YRL+VFPIE+PPLRDR+ D+ +L+N++        R SV LTPAA+AAL    WPGN+REL+NL+ERLA+L+P   VD   LP +++                   EPGT   AP  LP +G+DLKAH+ S+E SLIQ ALD+++G++AHAA  LH+RRTTL
Sbjct:  215 KPFVPVNCGAIPGDLLESELFGHEKGAFTGAISARQGRFEMAEGGTLFLDEIGDMSMPMQVKLLRVLQERTFERVGSNRTIPCNVRIIAATHRNLEDAIKHGDFREDLFYRLNVFPIEMPPLRDRVEDIPVLVNDLIHRIENEKRGSVRLTPAAIAALSHYRWPGNVRELANLIERLAILHPYGVVDVADLPEKFRPTGELPEAMQLPQVTLEGEEPGTVINAPR-LPNDGLDLKAHLNSLEQSLIQQALDESDGIVAHAAKRLHMRRTTL 484

[Close]

BLAST of mRNA_C-australica_Contig_10067.1.1 vs. uniprot
Match: A0A5A7W2C2_9GAMM (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Rhodanobacter sp. T12-5 TaxID=2024611 RepID=A0A5A7W2C2_9GAMM)

HSP 1 Score: 315 bits (806), Expect = 2.050e-102
Identity = 167/278 (60.07%), Postives = 201/278 (72.30%), Query Frame = 0

Query:    1 RPFVAVNCAAIPSELLESELFGHEKGAFSGAISRREGRFEMAEGGTLFLDEIGDMSLPMQVKVLRVLQERSYERVGGNEPRSCDVRLIAATHRDLEAMIKQGSFREDLYYRLDVFPIELPPLRDRLADLSILINEINRCHRANGRASVTLTPAALAALGTGAWPGNIRELSNLLERLAVLYPDEHVDEDRLPPRYQRR---------------------TEPGTPPKAPAT--LPPEGIDLKAHMASVEVSLIQAALDKTNGVIAHAADLLHLRRTTL 255
            +PFVA+NC AIP+ELLESELFGHEKGAF+GAIS R+GRFEMAEGGTLFLDEIGDMSLPMQVK+LRVLQER++ERVGGN+ + CDVR+IAATHR+LE  I    FREDL+YRL VFP+ELP LR+RL DLS L+NE N+     G   V  +  A+ AL   AWPGN+RELSNL+ER+A+L+P   V    LP +Y+ +                     TE G  P A A   LP EG+DLK H+A +EV LI+ ALD T GV+AHAA LLH++RTTL
Sbjct:  182 KPFVAINCGAIPAELLESELFGHEKGAFTGAISARKGRFEMAEGGTLFLDEIGDMSLPMQVKLLRVLQERAFERVGGNKTQRCDVRIIAATHRNLEQSIANDQFREDLFYRLSVFPLELPSLRERLDDLSTLVNEFNQRLARRGLGVVRFSAGAMQALRAHAWPGNVRELSNLVERMAILFPHGEVRSSDLPEKYRGQHAVDEVHGSALLALMEDQPLPTEAGVQPVADALRMLPVEGLDLKDHLADIEVGLIRQALDATGGVVAHAARLLHMQRTTL 459

[Close]

BLAST of mRNA_C-australica_Contig_10067.1.1 vs. uniprot
Match: A0A1V3NMB1_9GAMM (Sigma-54-dependent Fis family transcriptional regulator n=2 Tax=Thioalkalivibrio denitrificans TaxID=108003 RepID=A0A1V3NMB1_9GAMM)

HSP 1 Score: 314 bits (805), Expect = 2.510e-102
Identity = 162/266 (60.90%), Postives = 200/266 (75.19%), Query Frame = 0

Query:    1 RPFVAVNCAAIPSELLESELFGHEKGAFSGAISRREGRFEMAEGGTLFLDEIGDMSLPMQVKVLRVLQERSYERVGGNEPRSCDVRLIAATHRDLEAMIKQGSFREDLYYRLDVFPIELPPLRDRLADLSILINEINRCHRANGRASVTLTPAALAALGTGAWPGNIRELSNLLERLAVLYPDEHVDEDRLPPRYQRRTEPGTP-----------PKAPATLPPEGIDLKAHMASVEVSLIQAALDKTNGVIAHAADLLHLRRTTL 255
            RPFVAVNC AIP++LLESELFGHEKGAF+GA+S R+GRFE+A+GGTLFLDEIGDM LPMQVK+LRVLQER++ERVG N    CDVR+IAATHRDLE  I +G FREDLYYRL+VFPIE+PPLR R  DL +LI+E+       GR SV L  +AL AL T  WPGN+REL+NL+ERLA+++P E V+ D LP +++R  +               P   A LP EGIDLK ++  +E+ LI+ ALD+ +GV+AHAA LL +RRTTL
Sbjct:  186 RPFVAVNCGAIPADLLESELFGHEKGAFTGALSARQGRFELAQGGTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNRSIQCDVRIIAATHRDLETAIDEGRFREDLYYRLNVFPIEVPPLRHRRGDLPLLISELTNRMEGEGRGSVRLAHSALRALATYDWPGNVRELANLIERLAIMFPGETVEVDGLPAKFRREGDEELAELADQVLGEGVPGLDAQLPREGIDLKEYLNDLEMGLIRRALDEASGVVAHAAKLLGMRRTTL 451

[Close]

BLAST of mRNA_C-australica_Contig_10067.1.1 vs. uniprot
Match: A0A1G4A8X6_9GAMM (Fis family transcriptional regulator (Fragment) n=1 Tax=Xanthomonadales bacterium RIFOXYA1_FULL_69_10 TaxID=1802656 RepID=A0A1G4A8X6_9GAMM)

HSP 1 Score: 311 bits (796), Expect = 3.490e-102
Identity = 169/277 (61.01%), Postives = 203/277 (73.29%), Query Frame = 0

Query:    1 RPFVAVNCAAIPSELLESELFGHEKGAFSGAISRREGRFEMAEGGTLFLDEIGDMSLPMQVKVLRVLQERSYERVGGNEPRSCDVRLIAATHRDLEAMIKQGSFREDLYYRLDVFPIELPPLRDRLADLSILINEINRCHRANGRASVTLTPAALAALGTGAWPGNIRELSNLLERLAVLYPDEHVDEDRLPPRYQRRTEPGTP----PKAPA------------------TLPPEGIDLKAHMASVEVSLIQAALDKTNGVIAHAADLLHLRRTTL 255
            +PFVA+NC AIP++LLESELFGHEKGAF+GA+++R+GRFEMAEGGTL LDEIGDM + MQVK+LRVLQER++ERVGG +   CDVR+IAATHR+LE  I +G FREDL+YRL+VFPIE+P LR+R  DL  LI  I R    +GR SV L P A+ AL   AWPGN+RELSNLLERL+VL+P   V  D LP RY R   P TP    P++P                   TLPPEGIDL+ HMA +EV LI+AAL + +GV+AHAA LL LRRTTL
Sbjct:   89 KPFVAINCGAIPADLLESELFGHEKGAFTGALTQRKGRFEMAEGGTLLLDEIGDMPMAMQVKLLRVLQERTFERVGGTQTMQCDVRVIAATHRNLETHIAEGKFREDLFYRLNVFPIEMPALRERADDLPDLIAAIARQLTDSGRGSVKLAPDAVQALRHYAWPGNVRELSNLLERLSVLHPSGQVTADDLPARY-RAGLPDTPVAAMPESPVAAAAAAAAPDPATLSPNTTLPPEGIDLRGHMAEIEVELIRAALQQADGVVAHAAPLLGLRRTTL 364

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_10067.1.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_10067.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2E3NQR2_9GAMM	2.160e-109	63.70	Fis family transcriptional regulator n=1 Tax=Xanth...	[more]
A0A1E2UTJ7_9GAMM	3.950e-106	62.36	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A383XPI8_9GAMM	1.940e-105	61.85	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A6I7N6J6_9GAMM	1.990e-103	61.05	Sigma-54-dependent Fis family transcriptional regu...	[more]
G2DFT5_9GAMM	2.050e-103	61.99	DNA-binding regulatory protein for nitrogen fixati...	[more]
A0A2U0A650_9GAMM	2.980e-103	60.52	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A2U0A8D0_9GAMM	4.120e-103	61.25	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A5A7W2C2_9GAMM	2.050e-102	60.07	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A1V3NMB1_9GAMM	2.510e-102	60.90	Sigma-54-dependent Fis family transcriptional regu...	[more]
A0A1G4A8X6_9GAMM	3.490e-102	61.01	Fis family transcriptional regulator (Fragment) n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..122 e-value: 1.4E-47 score: 163.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..192
IPR002197	DNA binding HTH domain, Fis-type	PFAM	PF02954	HTH_8	coord: 223..255 e-value: 1.1E-7 score: 31.4
None	No IPR available	GENE3D	1.10.10.60		coord: 195..256 e-value: 7.9E-7 score: 30.9
None	No IPR available	GENE3D	1.10.8.60		coord: 123..194 e-value: 1.5E-15 score: 58.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..215
None	No IPR available	PANTHER	PTHR32071:SF58	PTS-DEPENDENT DIHYDROXYACETONE KINASE OPERON REGULATORY PROTEIN-RELATED	coord: 1..255
None	No IPR available	PANTHER	PTHR32071	TRANSCRIPTIONAL REGULATORY PROTEIN	coord: 1..255
None	No IPR available	CDD	cd00009	AAA	coord: 2..121 e-value: 1.89333E-14 score: 66.7859
IPR002078	RNA polymerase sigma factor 54 interaction domain	PFAM	PF00158	Sigma54_activat	coord: 2..118 e-value: 1.0E-53 score: 181.5
IPR002078	RNA polymerase sigma factor 54 interaction domain	PROSITE	PS50045	SIGMA54_INTERACT_4	coord: 1..179 score: 55.555622
IPR025943	Sigma-54 interaction domain, ATP-binding site 2	PROSITE	PS00676	SIGMA54_INTERACT_2	coord: 37..52
IPR025944	Sigma-54 interaction domain, conserved site	PROSITE	PS00688	SIGMA54_INTERACT_3	coord: 163..172
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 163..255

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-australica_Contig_10067	contig	C-australica_Contig_10067:70..840 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Chrysoparadoxa australica CS_1217 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-australica_Contig_10067.1.1	mRNA_C-australica_Contig_10067.1.1	Chrysoparadoxa australica CS_1217	mRNA	C-australica_Contig_10067 70..840 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-australica_Contig_10067.1.1 ID=prot_C-australica_Contig_10067.1.1|Name=mRNA_C-australica_Contig_10067.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=257bp
RPFVAVNCAAIPSELLESELFGHEKGAFSGAISRREGRFEMAEGGTLFLD
EIGDMSLPMQVKVLRVLQERSYERVGGNEPRSCDVRLIAATHRDLEAMIK
QGSFREDLYYRLDVFPIELPPLRDRLADLSILINEINRCHRANGRASVTL
TPAALAALGTGAWPGNIRELSNLLERLAVLYPDEHVDEDRLPPRYQRRTE
PGTPPKAPATLPPEGIDLKAHMASVEVSLIQAALDKTNGVIAHAADLLHL
RRTTLA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR002197	HTH_Fis
IPR002078	Sigma_54_int
IPR025943	Sigma_54_int_dom_ATP-bd_2
IPR025944	Sigma_54_int_dom_CS
IPR009057	Homeobox-like_sf