prot_C-australica_Contig_1004.2.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1004.2.1
Unique Nameprot_C-australica_Contig_1004.2.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length94
Homology
[Close]
BLAST of mRNA_C-australica_Contig_1004.2.1 vs. uniprot
Match: A0A7S2V4Y3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4Y3_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 1.580e-5
Identity = 23/46 (50.00%), Postives = 31/46 (67.39%), Query Frame = 0 
Query:   30 KFVRLAWVGEEVGGMAKGKAGMHKNSIFGAMDGAVGEVSATSAEEL 75
            K  R+ ++GE VGGM +GKAGMHKN++F  M G   +V A S  +L
Sbjct:   97 KLFRVFFIGENVGGMKRGKAGMHKNAVFDKMPGCSADVVANSLSDL 142
[Close]
BLAST of mRNA_C-australica_Contig_1004.2.1 vs. uniprot
Match: D8LEM3_ECTSI (ADF-H domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEM3_ECTSI)

HSP 1 Score: 48.5 bits (114), Expect = 6.660e-5
Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 0 
Query:    1 MSELSPHLDPGLVVWGALRCLAPDGGSGVKFVRLAWVGEEVGGMAKGKAGMHKNSIFGAMDGAVG-EVSATSAEEL 75
            +SEL   L   +V +  +R +  D GS  +F R+ +VGEEVGGM KG+A + KN++F   +GA G +   +S E+L
Sbjct:   65 VSELCSTLLDSMVAFCGVR-VGDDKGS-ARFHRILFVGEEVGGMKKGRAALAKNAVFAVFEGASGGDHDFSSVEDL 138
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1004.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2V4Y3_9STRA1.580e-550.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LEM3_ECTSI6.660e-540.79ADF-H domain-containing protein n=2 Tax=Ectocarpus... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 1..81
e-value: 6.3E-9
score: 37.5
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 2..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1004contigC-australica_Contig_1004:3629..4062 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1004.2.1mRNA_C-australica_Contig_1004.2.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1004 3080..4267 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1004.2.1 ID=prot_C-australica_Contig_1004.2.1|Name=mRNA_C-australica_Contig_1004.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=94bp
MSELSPHLDPGLVVWGALRCLAPDGGSGVKFVRLAWVGEEVGGMAKGKAG
MHKNSIFGAMDGAVGEVSATSAEELPGLLEEVGKVTGGWVFPV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029006ADF-H/Gelsolin-like_dom_sf