Homology
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match:
A0A6A5BTV8_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BTV8_NAEFO)
HSP 1 Score: 65.5 bits (158), Expect = 9.980e-9
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 3
Query: 174 KFLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQ 335
++ QCYQC+ ++V Q TK +W C +CGS+QSI KIF +S+ KD+RP+VQQ
Sbjct: 4 EYAVFQCYQCSAFSVNQITKNRKWKCKLCGSQQSIRKIFATSHQPKDLRPIVQQ 57
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match:
A0A1Y1I702_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I702_KLENI)
HSP 1 Score: 65.1 bits (157), Expect = 1.980e-8
Identity = 25/55 (45.45%), Postives = 41/55 (74.55%), Query Frame = 3
Query: 174 KFLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQL 338
+++ V+C+QC+ + V+Q TK N+WSC +C +KQS++K++G S A D+R L Q L
Sbjct: 3 EYIVVRCFQCSTFQVKQVTKSNKWSCSLCAAKQSVIKVYGVSGKASDLRKLAQDL 57
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match:
UPI001CFCE7EF (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFCE7EF)
HSP 1 Score: 63.2 bits (152), Expect = 5.080e-8
Identity = 26/54 (48.15%), Postives = 40/54 (74.07%), Query Frame = 3
Query: 174 KFLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQ 335
++ QCYQC+ ++V Q TK +W C +CGS+QSI K++ +S+ KD+RP+VQQ
Sbjct: 4 EYAVFQCYQCSAFSVNQITKNRKWKCKLCGSQQSIRKMYATSHQPKDLRPIVQQ 57
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match:
D2VMC5_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VMC5_NAEGR)
HSP 1 Score: 62.4 bits (150), Expect = 8.980e-8
Identity = 25/50 (50.00%), Postives = 37/50 (74.00%), Query Frame = 3
Query: 189 QCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQL 338
QC+ C +++ Q TK +W C +CGS+QSI K+F +SN KD+RP+VQ+L
Sbjct: 8 QCFNCTAFSINQVTKNRKWKCKLCGSQQSIRKVFANSNQPKDLRPIVQEL 57
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match:
A0A1Y2C0C8_9FUNG (SP-RING-type domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2C0C8_9FUNG)
HSP 1 Score: 61.6 bits (148), Expect = 1.210e-7
Identity = 26/54 (48.15%), Postives = 38/54 (70.37%), Query Frame = 3
Query: 177 FLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQL 338
F V+C+QC+ + VQQ+ K N+W C +CGSKQS+ K++ S+ A D R VQ+L
Sbjct: 4 FQVVRCFQCSAFVVQQEKKSNKWQCTLCGSKQSVTKVYFESHVAGDTRAAVQEL 57
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match:
D8LE90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE90_ECTSI)
HSP 1 Score: 61.6 bits (148), Expect = 4.670e-7
Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = 3
Query: 177 FLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQLAAGSAG 356
FLA++C+ C + V Q+TK +W C MCG QSIVK++G AKD+R LV L A + G
Sbjct: 8 FLALRCFSCQCFQVNQRTKSGKWKCRMCGEGQSIVKVWGRGGHAKDVRGLVMALNAAAGG 67
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Match:
UPI000644E7BC (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644E7BC)
HSP 1 Score: 57.8 bits (138), Expect = 7.480e-6
Identity = 24/54 (44.44%), Postives = 41/54 (75.93%), Query Frame = 3
Query: 174 KFLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSNSAKDIRPLVQQ 335
+++ +QCY C+ + V+Q+TK N ++C +C KQSI++I+G S AKD+R LV++
Sbjct: 4 EYILIQCYSCSMFQVKQKTKVNSFTCVICHEKQSIMRIYGISYQAKDLRDLVKK 57
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_999.3.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 7
0 1 Expect = 9.98e-9 / Id = 51.85 Expect = 1.98e-8 / Id = 45.45 Expect = 5.08e-8 / Id = 48.15 Expect = 8.98e-8 / Id = 50.00 Expect = 1.21e-7 / Id = 48.15 Expect = 4.67e-7 / Id = 48.33 Expect = 7.48e-6 / Id = 44.44 Sequence A0A6A5BTV8_NAEFO A0A1Y1I702_KLENI UPI001CFCE7EF D2VMC5_NAEGR A0A1Y2C0C8_9FUNG D8LE90_ECTSI UPI000644E7BC back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_999.3.1
>prot_C-australica_Contig_999.3.1 ID=prot_C-australica_Contig_999.3.1|Name=mRNA_C-australica_Contig_999.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=223bp
MWQMSQGKFLAVQCYQCNQYAVQQQTKGNQWSCCMCGSKQSIVKIFGSSN back to top mRNA from alignment at C-australica_Contig_999:1894..2842+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_999.3.1 ID=mRNA_C-australica_Contig_999.3.1|Name=mRNA_C-australica_Contig_999.3.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=949bp|location=Sequence derived from alignment at C-australica_Contig_999:1894..2842+ (Chrysoparadoxa australica CS_1217)GCATCCCCTGGACGCTGCTGCGTATTACATGGCATTCCCCCCGTTGCCTC
GCTCCTCCTTGCTCTCTTACCCCTGCTTATGTTTATTGTCCTCCTCTACC
CCTCCTGTGCTCCTCTATCGTACCCTTTCTCTAACCGTATCGTACCGCTC
CC ATGTGGCAGATGAGTCAGGGGAAATTCTTGGCAGTGCAGTGCTATCAG
TGCAACCAATATGCTGTGCAGCAGCAAACAAAGGGGAATCAATGGAGCTG
TTGTATGTGTGGCAGCAAACAG GTATGATAGCGACCCTGTCTCCCTTATT
AACCCCATGCTCCCTCTAACTTCGCATCCACCTCCAGTCCATTGTCAAAA
TCTTTGGGAGTAGTAATTCCGCAAAGGATATTCGTCCGTTAGTTCAGCAG
CTTGCAGCAGGGTCAGCAGGCCCTGCCTGCGCGTGGAGATATGCTTCTGA
TGGCATAATAGGGGGGCAAAAGAGGGGAAGAGAAGATGCATACATGGCAA
ACCTCTCAGAGCAAAAACGACAACGGGCTGTTATCATGCAGGACCGTGGT
GACAACAGCATGATTCAAAGCAGTGACGGAGCGGCAAACATGGGGGCTAT
GATGGAGACGGGTGATCTGGGTCAGGCTTACATGAGCCAAGCTTCTTGGT
CATTAAGAAATAACCAGGACCTGGGTCATAGACGTGAAGGGGCAATAGTT
GGTGGTAGTATGCTACACTTTTGGGACTCAAAGCTGGTGCCTTCTGCAGC
GCCGCCTACCCCAGCATCTACACCGCAGTGGGCGCACCGTTCTTTGGCAG
ACAAGATGGACCAAATGGATGAAGTGGCACCTATGATGGATGGCGGCTCT
GTCACGTCACGGTGGGACAAGTACATGAGCAGCTAG AAAGGGCAAGGCAA
CGCCAGTCTGCCAGTCTTTTTTTGTCAAAGCTAAGTGTTTTTCTTTTGC back to top Coding sequence (CDS) from alignment at C-australica_Contig_999:1894..2842+
>mRNA_C-australica_Contig_999.3.1 ID=mRNA_C-australica_Contig_999.3.1|Name=mRNA_C-australica_Contig_999.3.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=669bp|location=Sequence derived from alignment at C-australica_Contig_999:1894..2842+ (Chrysoparadoxa australica CS_1217) back to top