mRNA_C-australica_Contig_996.7.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: D7FVL9_ECTSI (Xel-1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL9_ECTSI) HSP 1 Score: 189 bits (481), Expect = 4.550e-48 Identity = 103/172 (59.88%), Postives = 127/172 (73.84%), Query Frame = 2 Query: 527 QNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRAL-VLNGATLEGGRRSLLVKFAEQHQK 1039
+NNLI+NYLP VT +LR +F VHG L VKVV +R+TGKSMGYGFV+F + AAAA A++GM I KRIKV SIARPSSKDIK SKLYVT+LP+ + Q+QV+ +F +CR+LVD +T +SRCTAFVQFD R EAK AL +NG L G ++ LLVKFAE H +
Sbjct: 107 ENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKV-SIARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFE------QCRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFAEDHHR 271
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A7S3HB55_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HB55_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.830e-40 Identity = 88/170 (51.76%), Postives = 120/170 (70.59%), Query Frame = 2 Query: 533 NLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALVLNGATLEGGRRSLLVKFAE-QHQK 1039
NLIVNYLP D+ L+ +F G +VS KVV++R T KS+GYGFV+F DA A++ ++G I NK +KV S+ARP+S +I+ KLYVT+LP+ Y + V+HLF +G IIECR L DR + ++ AFVQFD +++A AL LNG LEGG+R L+VK+AE QH+K
Sbjct: 37 NLIVNYLPHDIDDLALKGLFVEFGEIVSAKVVTDRNTKKSLGYGFVKFLCEDDAKLAIQRLNGFTIDNKCLKV-SVARPASLEIRNCKLYVTNLPKDYTEIDVIHLFQEFGDIIECRVLKDRNSRTNKGVAFVQFDNKTQANNALSLNGCQLEGGQRGLVVKYAEDQHKK 205
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A7R9UBS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBS9_9STRA) HSP 1 Score: 159 bits (402), Expect = 1.390e-39 Identity = 84/169 (49.70%), Postives = 118/169 (69.82%), Query Frame = 2 Query: 524 PQNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSK--DIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALVLNGATLEGGRRSLLVKFA 1024
PQNNLIVNYL D+T L R+F HG + SVK+V +R TG S+ YGFV+F AA ALEA++G+ IG KR+KV SIARP+S +++ +KLYV+++P+ Y ++ V LF+ +G I+ECR L D + G SRCTAFV ++ A+ ALV++G L+G R ++VK A
Sbjct: 26 PQNNLIVNYLTHDITEDKLLRLFSAHGEVESVKIVRDRETGMSLCYGFVKFKKDDCAATALEALNGLDIGQKRLKV-SIARPASGVWNLRNNKLYVSYIPKTYTKDDVCRLFNRFGRILECRVLYDEK-GESRCTAFVHMSTKAAAEAALVMHGVQLQGATRGMVVKMA 192
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A1S3D973_DIACI (sex-lethal homolog isoform X4 n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3D973_DIACI) HSP 1 Score: 150 bits (379), Expect = 1.050e-37 Identity = 81/185 (43.78%), Postives = 119/185 (64.32%), Query Frame = 2 Query: 533 NLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDAPVAE 1078
NLI+NYLP +T +L +F GP+ S +V+ + TG S G+GFV + DAA A++ ++G+Q+ NK++KV S ARPS DIK + LYVT+LP ++Q+ H+FSPYG I++ L D+ TG+ R AFV++DK+ EA+ A+ LNG G ++VK AE+H QKA GW A ++
Sbjct: 14 NLIINYLPQTMTEKELFSMFVTIGPVESCRVMKDNKTGYSYGFGFVNYSKEEDAAKAIQQLNGLQVQNKKLKV-SYARPSGDDIKETNLYVTNLPRTITEDQLEHMFSPYGRIVQKNILKDKITGMPRGVAFVRYDKKDEAQNAIDGLNGTIPMGTTDPIMVKIAEEHGKQKAAYYAGWQAGFSQ 197
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A6J1S7V2_FRAOC (sex-lethal homolog isoform X1 n=3 Tax=Thripinae TaxID=153976 RepID=A0A6J1S7V2_FRAOC) HSP 1 Score: 151 bits (382), Expect = 1.610e-37 Identity = 87/204 (42.65%), Postives = 124/204 (60.78%), Query Frame = 2 Query: 527 QNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDAPVAERDFLDRNAMMSREVGGG 1129
+ NLIVNYLP ++T +L +F GP+ S +V+ + TG S G+GFV + + DAA A+ ++G+Q+ NKR+KV S ARPS DIK + LYVT+LP+ + Q+ LF +G I++ L D+ TG+ R AFV+FD+R EA A+ +NG EGG L VK AE+H QKA GW A + + + + SR G G
Sbjct: 19 RTNLIVNYLPQNMTEKELYSMFVTIGPVESCRVMKDFKTGYSYGFGFVNYSKAEDAAHAISTLNGLQVQNKRLKV-SFARPSGDDIKETNLYVTNLPKNVSEAQLDGLFGKFGTIVQKNLLKDKITGMPRGVAFVRFDRREEAMEAIQHMNGVIPEGGTEPLCVKIAEEHGKQKAAYYAGWQAGYTQSRGMPVSVVGSRGRGRG 221
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A1B6GYV4_9HEMI (Uncharacterized protein n=3 Tax=Proconiini TaxID=565685 RepID=A0A1B6GYV4_9HEMI) HSP 1 Score: 149 bits (375), Expect = 2.190e-37 Identity = 83/186 (44.62%), Postives = 119/186 (63.98%), Query Frame = 2 Query: 530 NNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDAPVAE 1078
+NLIVNYLP ++T +L +F GP+VS +V+ + TG S G+GFV + DA A++ ++G +I NKRIKV S ARPS DIK + LYVT+LP Y ++ + LF +G I++ L+D+ TGL R AFV+FD+R EA+ A+ L+G +GG L V+ AE+H QKA GW A + +
Sbjct: 6 SNLIVNYLPQNMTDRELYSMFVTIGPVVSCRVMKDFKTGYSYGFGFVNYSRPEDAERAIQQLNGQEIFNKRIKV-SYARPSGDDIKDTNLYVTNLPRNYTEQNLEMLFGQFGTIVQKNLLLDKLTGLPRGVAFVRFDRREEAQEAIRNLDGVVPDGGNERLSVRVAEEHGKQKAAYFAGWQAGIQQ 190
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A1S3D7X3_DIACI (sex-lethal homolog isoform X1 n=2 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3D7X3_DIACI) HSP 1 Score: 150 bits (379), Expect = 6.910e-37 Identity = 81/185 (43.78%), Postives = 119/185 (64.32%), Query Frame = 2 Query: 533 NLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDAPVAE 1078
NLI+NYLP +T +L +F GP+ S +V+ + TG S G+GFV + DAA A++ ++G+Q+ NK++KV S ARPS DIK + LYVT+LP ++Q+ H+FSPYG I++ L D+ TG+ R AFV++DK+ EA+ A+ LNG G ++VK AE+H QKA GW A ++
Sbjct: 14 NLIINYLPQTMTEKELFSMFVTIGPVESCRVMKDNKTGYSYGFGFVNYSKEEDAAKAIQQLNGLQVQNKKLKV-SYARPSGDDIKETNLYVTNLPRTITEDQLEHMFSPYGRIVQKNILKDKITGMPRGVAFVRYDKKDEAQNAIDGLNGTIPMGTTDPIMVKIAEEHGKQKAAYYAGWQAGFSQ 197
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: UPI0018C1E71E (sex-lethal isoform X2 n=1 Tax=Bombyx mori TaxID=7091 RepID=UPI0018C1E71E) HSP 1 Score: 149 bits (376), Expect = 2.500e-36 Identity = 85/185 (45.95%), Postives = 113/185 (61.08%), Query Frame = 2 Query: 521 TPQNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDA 1066
T + NLIVNYLP ++T DL +F GP+ S +V+ + TG S G+GFV F DAA A++ +G Q+ NKR+KV S ARPS DIK + LYVT+LP +Q+ +F YG I++ L D+ +G R AFV++DKR EA+ A+ LN EGG L VK AE+H QKA GW A
Sbjct: 60 TARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKV-SYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVAEEHGKQKAAYYAGWSA 243
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A6P8ZJM4_THRPL (sex-lethal homolog isoform X2 n=3 Tax=Thripinae TaxID=153976 RepID=A0A6P8ZJM4_THRPL) HSP 1 Score: 146 bits (369), Expect = 3.020e-36 Identity = 83/183 (45.36%), Postives = 117/183 (63.93%), Query Frame = 2 Query: 527 QNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDA 1066
+ NLIVNYLP ++T +L +F GP+ S +V+ + TG S G+GFV + + DAA A+ ++G+Q+ NKR+KV S ARPS +DIK + LYVT+LP+ + Q+ LF +G I++ L D+ TGL R AFV+FD++ EA A+ +NG EGG L VK AE+H QKA GW A
Sbjct: 19 RTNLIVNYLPQNMTEKELYSMFVTIGPVESCRVMKDFKTGYSYGFGFVNYSKAEDAAHAISTLNGLQVQNKRLKV-SFARPSGEDIKETNLYVTNLPKNVTEGQLEVLFGKFGTIVQKNLLKDKITGLPRGVAFVRFDRKEEAMDAIQQMNGVIPEGGTEPLQVKIAEEHGKQKAAYYAGWQA 200
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A0B6Y8U1_9EUPU (Uncharacterized protein n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6Y8U1_9EUPU) HSP 1 Score: 149 bits (376), Expect = 3.280e-36 Identity = 87/211 (41.23%), Postives = 129/211 (61.14%), Query Frame = 2 Query: 533 NLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRAL-VLNGATLEGGRRSLLVKFAEQHQKAPGR------GGWDAPVAERDFLDR----NAMMSREVGGGV 1132
NLI+NYLP +T + R +F GP+ S K+V +++TG S G+GFV F +++DA A+E +SG+QI NKRIKV ++ARPS IKG+ +YV ++P + + ++ LF PYG II+ R LVD TG+S+ FV +D R EA+ A+ L+G T EG +++KFA+ + K G G+ AP R+ ++R N M G G
Sbjct: 12 NLIINYLPQTLTDEEFRSMFLSVGPVKSSKIVRDKSTGYSYGFGFVDFQHATDAHRAIETLSGLQIQNKRIKV-ALARPSGDQIKGANIYVRNIPVHWKEIELNRLFDPYGKIIQSRVLVDLSTGVSKRVGFVLYDTRDEAETAIKCLSGKTPEGCTEPIMIKFADDNSKKKGPVQYVPVPGFAAPGPMRNQMNRFQRFNPMAGNFSGQGA 221 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_996.7.1 >prot_C-australica_Contig_996.7.1 ID=prot_C-australica_Contig_996.7.1|Name=mRNA_C-australica_Contig_996.7.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=473bp MLKLLDIEEDPMDHSHSSRHSQATLVEEYTPPEHSASRPPLEGASMMAPPback to top mRNA from alignment at C-australica_Contig_996:13513..17503- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_996.7.1 ID=mRNA_C-australica_Contig_996.7.1|Name=mRNA_C-australica_Contig_996.7.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3991bp|location=Sequence derived from alignment at C-australica_Contig_996:13513..17503- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_996:13513..17503- >mRNA_C-australica_Contig_996.7.1 ID=mRNA_C-australica_Contig_996.7.1|Name=mRNA_C-australica_Contig_996.7.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1419bp|location=Sequence derived from alignment at C-australica_Contig_996:13513..17503- (Chrysoparadoxa australica CS_1217)back to top |