mRNA_C-australica_Contig_996.7.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_996.7.1
Unique NamemRNA_C-australica_Contig_996.7.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: D7FVL9_ECTSI (Xel-1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL9_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 4.550e-48
Identity = 103/172 (59.88%), Postives = 127/172 (73.84%), Query Frame = 2 
Query:  527 QNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRAL-VLNGATLEGGRRSLLVKFAEQHQK 1039
            +NNLI+NYLP  VT  +LR +F VHG L  VKVV +R+TGKSMGYGFV+F  +  AAAA  A++GM I  KRIKV SIARPSSKDIK SKLYVT+LP+ + Q+QV+ +F       +CR+LVD +T +SRCTAFVQFD R EAK AL  +NG  L G ++ LLVKFAE H +
Sbjct:  107 ENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKV-SIARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFE------QCRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFAEDHHR 271
[Close]
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A7S3HB55_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HB55_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.830e-40
Identity = 88/170 (51.76%), Postives = 120/170 (70.59%), Query Frame = 2 
Query:  533 NLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALVLNGATLEGGRRSLLVKFAE-QHQK 1039
            NLIVNYLP D+    L+ +F   G +VS KVV++R T KS+GYGFV+F    DA  A++ ++G  I NK +KV S+ARP+S +I+  KLYVT+LP+ Y +  V+HLF  +G IIECR L DR +  ++  AFVQFD +++A  AL LNG  LEGG+R L+VK+AE QH+K
Sbjct:   37 NLIVNYLPHDIDDLALKGLFVEFGEIVSAKVVTDRNTKKSLGYGFVKFLCEDDAKLAIQRLNGFTIDNKCLKV-SVARPASLEIRNCKLYVTNLPKDYTEIDVIHLFQEFGDIIECRVLKDRNSRTNKGVAFVQFDNKTQANNALSLNGCQLEGGQRGLVVKYAEDQHKK 205
[Close]
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A7R9UBS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBS9_9STRA)

HSP 1 Score: 159 bits (402), Expect = 1.390e-39
Identity = 84/169 (49.70%), Postives = 118/169 (69.82%), Query Frame = 2 
Query:  524 PQNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSK--DIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALVLNGATLEGGRRSLLVKFA 1024
            PQNNLIVNYL  D+T   L R+F  HG + SVK+V +R TG S+ YGFV+F     AA ALEA++G+ IG KR+KV SIARP+S   +++ +KLYV+++P+ Y ++ V  LF+ +G I+ECR L D + G SRCTAFV    ++ A+ ALV++G  L+G  R ++VK A
Sbjct:   26 PQNNLIVNYLTHDITEDKLLRLFSAHGEVESVKIVRDRETGMSLCYGFVKFKKDDCAATALEALNGLDIGQKRLKV-SIARPASGVWNLRNNKLYVSYIPKTYTKDDVCRLFNRFGRILECRVLYDEK-GESRCTAFVHMSTKAAAEAALVMHGVQLQGATRGMVVKMA 192
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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A1S3D973_DIACI (sex-lethal homolog isoform X4 n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3D973_DIACI)

HSP 1 Score: 150 bits (379), Expect = 1.050e-37
Identity = 81/185 (43.78%), Postives = 119/185 (64.32%), Query Frame = 2 
Query:  533 NLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDAPVAE 1078
            NLI+NYLP  +T  +L  +F   GP+ S +V+ +  TG S G+GFV +    DAA A++ ++G+Q+ NK++KV S ARPS  DIK + LYVT+LP    ++Q+ H+FSPYG I++   L D+ TG+ R  AFV++DK+ EA+ A+  LNG    G    ++VK AE+H  QKA    GW A  ++
Sbjct:   14 NLIINYLPQTMTEKELFSMFVTIGPVESCRVMKDNKTGYSYGFGFVNYSKEEDAAKAIQQLNGLQVQNKKLKV-SYARPSGDDIKETNLYVTNLPRTITEDQLEHMFSPYGRIVQKNILKDKITGMPRGVAFVRYDKKDEAQNAIDGLNGTIPMGTTDPIMVKIAEEHGKQKAAYYAGWQAGFSQ 197
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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A6J1S7V2_FRAOC (sex-lethal homolog isoform X1 n=3 Tax=Thripinae TaxID=153976 RepID=A0A6J1S7V2_FRAOC)

HSP 1 Score: 151 bits (382), Expect = 1.610e-37
Identity = 87/204 (42.65%), Postives = 124/204 (60.78%), Query Frame = 2 
Query:  527 QNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDAPVAERDFLDRNAMMSREVGGG 1129
            + NLIVNYLP ++T  +L  +F   GP+ S +V+ +  TG S G+GFV +  + DAA A+  ++G+Q+ NKR+KV S ARPS  DIK + LYVT+LP+   + Q+  LF  +G I++   L D+ TG+ R  AFV+FD+R EA  A+  +NG   EGG   L VK AE+H  QKA    GW A   +   +  + + SR  G G
Sbjct:   19 RTNLIVNYLPQNMTEKELYSMFVTIGPVESCRVMKDFKTGYSYGFGFVNYSKAEDAAHAISTLNGLQVQNKRLKV-SFARPSGDDIKETNLYVTNLPKNVSEAQLDGLFGKFGTIVQKNLLKDKITGMPRGVAFVRFDRREEAMEAIQHMNGVIPEGGTEPLCVKIAEEHGKQKAAYYAGWQAGYTQSRGMPVSVVGSRGRGRG 221
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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A1B6GYV4_9HEMI (Uncharacterized protein n=3 Tax=Proconiini TaxID=565685 RepID=A0A1B6GYV4_9HEMI)

HSP 1 Score: 149 bits (375), Expect = 2.190e-37
Identity = 83/186 (44.62%), Postives = 119/186 (63.98%), Query Frame = 2 
Query:  530 NNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDAPVAE 1078
            +NLIVNYLP ++T  +L  +F   GP+VS +V+ +  TG S G+GFV +    DA  A++ ++G +I NKRIKV S ARPS  DIK + LYVT+LP  Y ++ +  LF  +G I++   L+D+ TGL R  AFV+FD+R EA+ A+  L+G   +GG   L V+ AE+H  QKA    GW A + +
Sbjct:    6 SNLIVNYLPQNMTDRELYSMFVTIGPVVSCRVMKDFKTGYSYGFGFVNYSRPEDAERAIQQLNGQEIFNKRIKV-SYARPSGDDIKDTNLYVTNLPRNYTEQNLEMLFGQFGTIVQKNLLLDKLTGLPRGVAFVRFDRREEAQEAIRNLDGVVPDGGNERLSVRVAEEHGKQKAAYFAGWQAGIQQ 190
[Close]
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A1S3D7X3_DIACI (sex-lethal homolog isoform X1 n=2 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3D7X3_DIACI)

HSP 1 Score: 150 bits (379), Expect = 6.910e-37
Identity = 81/185 (43.78%), Postives = 119/185 (64.32%), Query Frame = 2 
Query:  533 NLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDAPVAE 1078
            NLI+NYLP  +T  +L  +F   GP+ S +V+ +  TG S G+GFV +    DAA A++ ++G+Q+ NK++KV S ARPS  DIK + LYVT+LP    ++Q+ H+FSPYG I++   L D+ TG+ R  AFV++DK+ EA+ A+  LNG    G    ++VK AE+H  QKA    GW A  ++
Sbjct:   14 NLIINYLPQTMTEKELFSMFVTIGPVESCRVMKDNKTGYSYGFGFVNYSKEEDAAKAIQQLNGLQVQNKKLKV-SYARPSGDDIKETNLYVTNLPRTITEDQLEHMFSPYGRIVQKNILKDKITGMPRGVAFVRYDKKDEAQNAIDGLNGTIPMGTTDPIMVKIAEEHGKQKAAYYAGWQAGFSQ 197
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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: UPI0018C1E71E (sex-lethal isoform X2 n=1 Tax=Bombyx mori TaxID=7091 RepID=UPI0018C1E71E)

HSP 1 Score: 149 bits (376), Expect = 2.500e-36
Identity = 85/185 (45.95%), Postives = 113/185 (61.08%), Query Frame = 2 
Query:  521 TPQNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDA 1066
            T + NLIVNYLP ++T  DL  +F   GP+ S +V+ +  TG S G+GFV F    DAA A++  +G Q+ NKR+KV S ARPS  DIK + LYVT+LP     +Q+  +F  YG I++   L D+ +G  R  AFV++DKR EA+ A+  LN    EGG   L VK AE+H  QKA    GW A
Sbjct:   60 TARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKV-SYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVAEEHGKQKAAYYAGWSA 243
[Close]
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A6P8ZJM4_THRPL (sex-lethal homolog isoform X2 n=3 Tax=Thripinae TaxID=153976 RepID=A0A6P8ZJM4_THRPL)

HSP 1 Score: 146 bits (369), Expect = 3.020e-36
Identity = 83/183 (45.36%), Postives = 117/183 (63.93%), Query Frame = 2 
Query:  527 QNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDA 1066
            + NLIVNYLP ++T  +L  +F   GP+ S +V+ +  TG S G+GFV +  + DAA A+  ++G+Q+ NKR+KV S ARPS +DIK + LYVT+LP+   + Q+  LF  +G I++   L D+ TGL R  AFV+FD++ EA  A+  +NG   EGG   L VK AE+H  QKA    GW A
Sbjct:   19 RTNLIVNYLPQNMTEKELYSMFVTIGPVESCRVMKDFKTGYSYGFGFVNYSKAEDAAHAISTLNGLQVQNKRLKV-SFARPSGEDIKETNLYVTNLPKNVTEGQLEVLFGKFGTIVQKNLLKDKITGLPRGVAFVRFDRKEEAMDAIQQMNGVIPEGGTEPLQVKIAEEHGKQKAAYYAGWQA 200
[Close]
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A0B6Y8U1_9EUPU (Uncharacterized protein n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6Y8U1_9EUPU)

HSP 1 Score: 149 bits (376), Expect = 3.280e-36
Identity = 87/211 (41.23%), Postives = 129/211 (61.14%), Query Frame = 2 
Query:  533 NLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRAL-VLNGATLEGGRRSLLVKFAEQHQKAPGR------GGWDAPVAERDFLDR----NAMMSREVGGGV 1132
            NLI+NYLP  +T  + R +F   GP+ S K+V +++TG S G+GFV F +++DA  A+E +SG+QI NKRIKV ++ARPS   IKG+ +YV ++P  + + ++  LF PYG II+ R LVD  TG+S+   FV +D R EA+ A+  L+G T EG    +++KFA+ + K  G        G+ AP   R+ ++R    N M     G G 
Sbjct:   12 NLIINYLPQTLTDEEFRSMFLSVGPVKSSKIVRDKSTGYSYGFGFVDFQHATDAHRAIETLSGLQIQNKRIKV-ALARPSGDQIKGANIYVRNIPVHWKEIELNRLFDPYGKIIQSRVLVDLSTGVSKRVGFVLYDTRDEAETAIKCLSGKTPEGCTEPIMIKFADDNSKKKGPVQYVPVPGFAAPGPMRNQMNRFQRFNPMAGNFSGQGA 221
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVL9_ECTSI4.550e-4859.88Xel-1 protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A7S3HB55_9STRA1.830e-4051.76Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7R9UBS9_9STRA1.390e-3949.70Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A1S3D973_DIACI1.050e-3743.78sex-lethal homolog isoform X4 n=1 Tax=Diaphorina c... [more]
A0A6J1S7V2_FRAOC1.610e-3742.65sex-lethal homolog isoform X1 n=3 Tax=Thripinae Ta... [more]
A0A1B6GYV4_9HEMI2.190e-3744.62Uncharacterized protein n=3 Tax=Proconiini TaxID=5... [more]
A0A1S3D7X3_DIACI6.910e-3743.78sex-lethal homolog isoform X1 n=2 Tax=Diaphorina c... [more]
UPI0018C1E71E2.500e-3645.95sex-lethal isoform X2 n=1 Tax=Bombyx mori TaxID=70... [more]
A0A6P8ZJM4_THRPL3.020e-3645.36sex-lethal homolog isoform X2 n=3 Tax=Thripinae Ta... [more]
A0A0B6Y8U1_9EUPU3.280e-3641.23Uncharacterized protein n=1 Tax=Arion vulgaris Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_996contigC-australica_Contig_996:13513..17503 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FVL9
PFAMsRRM_1
Model size2379
Max annot lvl2759|Eukaryota
KEGG koko:K13208
Hectar predicted targeting categoryother localisation
Exons14
Evalue4.23e-51
EggNOG OGsKOG0145@1|root,KOG0145@2759|Eukaryota
DescriptionRNA binding
Cds size1419
COG categoryDU
BRITEko00000,ko03019,ko03041
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_996.7.1prot_C-australica_Contig_996.7.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_996 14190..17220 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588864.2526884-UTR-C-australica_Contig_996:13512..141891682588864.2526884-UTR-C-australica_Contig_996:13512..14189Chrysoparadoxa australica CS_1217UTRC-australica_Contig_996 13513..14189 -
1682588864.41403-UTR-C-australica_Contig_996:17220..175031682588864.41403-UTR-C-australica_Contig_996:17220..17503Chrysoparadoxa australica CS_1217UTRC-australica_Contig_996 17221..17503 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588864.2709696-CDS-C-australica_Contig_996:14189..142061682588864.2709696-CDS-C-australica_Contig_996:14189..14206Chrysoparadoxa australica CS_1217CDSC-australica_Contig_996 14190..14206 -
1682588864.2793741-CDS-C-australica_Contig_996:14335..144961682588864.2793741-CDS-C-australica_Contig_996:14335..14496Chrysoparadoxa australica CS_1217CDSC-australica_Contig_996 14336..14496 -
1682588864.2872992-CDS-C-australica_Contig_996:14607..147361682588864.2872992-CDS-C-australica_Contig_996:14607..14736Chrysoparadoxa australica CS_1217CDSC-australica_Contig_996 14608..14736 -
1682588864.2965982-CDS-C-australica_Contig_996:14884..151081682588864.2965982-CDS-C-australica_Contig_996:14884..15108Chrysoparadoxa australica CS_1217CDSC-australica_Contig_996 14885..15108 -
1682588864.3070583-CDS-C-australica_Contig_996:15201..152971682588864.3070583-CDS-C-australica_Contig_996:15201..15297Chrysoparadoxa australica CS_1217CDSC-australica_Contig_996 15202..15297 -
1682588864.3174114-CDS-C-australica_Contig_996:15445..155521682588864.3174114-CDS-C-australica_Contig_996:15445..15552Chrysoparadoxa australica CS_1217CDSC-australica_Contig_996 15446..15552 -
1682588864.3288236-CDS-C-australica_Contig_996:15701..157871682588864.3288236-CDS-C-australica_Contig_996:15701..15787Chrysoparadoxa australica CS_1217CDSC-australica_Contig_996 15702..15787 -
1682588864.341717-CDS-C-australica_Contig_996:15893..159371682588864.341717-CDS-C-australica_Contig_996:15893..15937Chrysoparadoxa australica CS_1217CDSC-australica_Contig_996 15894..15937 -
1682588864.351973-CDS-C-australica_Contig_996:16047..161341682588864.351973-CDS-C-australica_Contig_996:16047..16134Chrysoparadoxa australica CS_1217CDSC-australica_Contig_996 16048..16134 -
1682588864.3616078-CDS-C-australica_Contig_996:16292..164211682588864.3616078-CDS-C-australica_Contig_996:16292..16421Chrysoparadoxa australica CS_1217CDSC-australica_Contig_996 16293..16421 -
1682588864.3721669-CDS-C-australica_Contig_996:16551..166801682588864.3721669-CDS-C-australica_Contig_996:16551..16680Chrysoparadoxa australica CS_1217CDSC-australica_Contig_996 16552..16680 -
1682588864.38233-CDS-C-australica_Contig_996:16789..168581682588864.38233-CDS-C-australica_Contig_996:16789..16858Chrysoparadoxa australica CS_1217CDSC-australica_Contig_996 16790..16858 -
1682588864.393127-CDS-C-australica_Contig_996:16933..169901682588864.393127-CDS-C-australica_Contig_996:16933..16990Chrysoparadoxa australica CS_1217CDSC-australica_Contig_996 16934..16990 -
1682588864.4039795-CDS-C-australica_Contig_996:17136..172201682588864.4039795-CDS-C-australica_Contig_996:17136..17220Chrysoparadoxa australica CS_1217CDSC-australica_Contig_996 17137..17220 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_996.7.1

>prot_C-australica_Contig_996.7.1 ID=prot_C-australica_Contig_996.7.1|Name=mRNA_C-australica_Contig_996.7.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=473bp
MLKLLDIEEDPMDHSHSSRHSQATLVEEYTPPEHSASRPPLEGASMMAPP
APQPPYAPVNVLAYVNDNSMYQQINPVRVTPQNNLIVNYLPPDVTSSDLR
RVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIG
NKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECR
SLVDRRTGLSRCTAFVQFDKRSEAKRALVLNGATLEGGRRSLLVKFAEQH
QKAPGRGGWDAPVAERDFLDRNAMMSREVGGGVHRHLKQQHEDLSQLHAS
AFSGYTSYASNNSLRLSSYGSDSSGLDGASRYYGDSSRGSHSNGHVGLSI
GMQSTAGVPVDNAGYQTMLNRSSQQHRDGHGRVTGPACSNVVSPSGAGLP
MYPQYIPQQPEYDSSGPLGGCNIVFDNPVGRPATSATIKAPRSERDRLPS
HINHAGDNAELTLPDLAGLSLS*
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mRNA from alignment at C-australica_Contig_996:13513..17503-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_996.7.1 ID=mRNA_C-australica_Contig_996.7.1|Name=mRNA_C-australica_Contig_996.7.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3991bp|location=Sequence derived from alignment at C-australica_Contig_996:13513..17503- (Chrysoparadoxa australica CS_1217)
GGGGGAGGAACAGGCAATGAACGAAGAGACTTAATTTCATTAGTTCTACA
TACCACCCTTTGGTACATGTGGGTAAAGTGCAAACTGACTCACGCTACCC
AGGCCGGCTTAGGAAGCGTCTTTAGGCTGTTATTTATTTGCGTGGAAGGG
TATGCTGGCATGCTAATGCTTAGCGTATCCAGCAACTGATTTTGTTCCGC
CACCACCGTCATAGTTCCCGTAGGATCGACAACAGCCAACGTGCTAGGCC
CAGATAGGCCCATAGGCACCACCAGTGCATATAATGCTCAAGCTTTTGGA
CATCGAAGAAGACCCCATGGATCACAGCCATTCTTCGAGGCATTCCCAGG
CTACCCTTGTGGAGGAGGTAAGCACAGTGGCATAGCCCCCCACCTCCCTT
TCACAGCCAAGCGCTAGTTCTAAATGCGCCGCCTATCTTCCATTCCCCCG
TTATCTTCTTCTCATCTTCTTCTCAGTGTACCCTCTCTGAACTGCTGCCC
ATTTTCTCTTCAGTACACGCCGCCGGAGCATTCCGCTAGTCGTCCACCGC
TAGAGGGCGCCTCTATGATGGTGAGTTTGCCGGTTTTAGTCCATACGGTT
CGCGGCGGGGTACACTGATGTCGTTCCACCACGCTTTGGTTTCAGGCACC
ACCGGCACCGCAACCACCATACGCCCCAGTCAACGTGTTGGCCTATGTCA
ATGACAACAGCATGGTAAGCACCACCCCCATGGGGCATACGCTGAGCCTG
CCTGTATTGGTTCGGTTTGACACCTGGAGGGTCTCTTACAACGAACGCCC
TTGCCCTGTGCTCCTCCCCTCAGTACCAGCAGATAAATCCAGTGCGTGTC
ACTCCGCAGAACAATCTCATAGTTAACTATCTGCCGCCTGATGTCACTAG
CTCTGACTTACGGCGTGTTTTTGAGGTACACGGCCCGCTGGTGAGCGTCA
AGGTAAGGAAGCAGGTTGCAAGCAAGCTGCTGCCTATACCTCCTTTGGTG
GCAGGTTGATTCTGAGGCCCCTACTGCGTGTGATTTTCCTCACGGAAATT
TTCCTGATACACGACTCTTCTCATCTTGGAAGGTTGTTTCAGAGCGCGCA
ACAGGAAAGTCAATGGGATACGGGTTTGTGAGATTTCACAACTCCTCGGA
TGCCGCTGCTGCCCTTGAGGCCATGTCTGGCATGCAGATTGGAAACAAGC
GAATTAAGGTAGTGATGGCTACGTGCGGAGTCGGCTGCCACTGCCGCTGG
ACTTCGGAAGGGTGTGGTGGTCTGTCTCACCAGCCTGCCAGAGGCTGTTG
CCATGAGCGCGCCGCACCCACTTTTGACTTGTAACGGCCGGAATCTCCTC
TCCTTTGTGATACCCAAAGGTCAGCATTGCTCGCCCAAGCAGCAAAGACA
TCAAGGGAAGCAAGCTGTATGTTACCCACTTGCCTGAGTTCTATGGCCAA
GAGCAGGTAATGTATTGTGGTGCTGAACTCACTCAGCTCTAGGTGTTCCA
TCCACCCCCTACCATTGAGCTGAACTGAACTGAGCTTGCTTGTATTGCAT
TGCATTGTATTGCCAGGTCTTGCATCTTTTCTCGCCATACGGTGCTATCA
TCGAGTGCAGGTGAGAGTGGCATGCATGCGTAACTCCTCGAACTTCCACC
TGCTTCCCACTGCAAGCAAGCCCCTTACAGTACATGCTCTCTCGCCTTTC
GCTTTGCTTTATACAGGTCATTAGTGGACAGGAGGACTGGGCTGAGCAGA
TGCACTGCGTTTGTTCAGTTTGATAAGAGATCAGAGGCAAAGAGGGCTTT
AGGTATTGTATTGCCTTCTCCCACCCTCCTTTAATTTTGGTTAGGGTTAT
AGATGATTTTTGGTTCGTTTTGATGGGGCTGCTGCTGCTGGCTGGAACCT
TGATACATTCGCTCTGCTCGCCTTTAACCTTATGCTCACTAATAATCACA
GTGCTCAATGGTGCAACGCTTGAGGGGGGGAGGAGGTCCCTGCTGGTAAA
GTTTGCAGAGCAGCATCAAAAGGCTCCTGGCCGTGGTGGCTGGGATGCGC
CTGTTGCGGTGCGTTAGCTTCACACTGGCGTGACTCACAACTCATCTGTT
AAAGTGTTGAGTGGTCATTGATTGACTGGTGGGCAAGCTTGGAGTCTAAT
AAGGATGCAAAGCTCGTGGCACCTAACCTTGGATCCATTGCTACGCCTGT
TAGCAGGAGAGAGACTTCCTAGATCGCAATGCGATGATGTCACGTGAAGT
GGGGGGAGGAGTACACAGGCACTTGAAGCAGCAACATGAGGACCTGTCGC
AGGTAGTAATCAATAGCACGCTTCACTAGGCATTAAGGCTATCTTGACCA
CCTAACCACTCTTGCTCTCTTGTTCTCTTGCTCTTATCCCTTTAGCTTCA
CGCGTCGGCTTTTTCGGGGTACACCTCATATGCCAGCAACAACAGCTTAC
GGCTCAGTTCATACGGGAGCGACAGCAGTGGGCTAGATGGTGCGTCTCGG
TATTACGGTGACAGCAGCAGAGGCAGCCACAGTAACGGTCACGTGGGACT
AAGCATCGGGATGCAGTCTACGGCGGGTGTCCCTGTGGACAATGCAGGGT
ACCAGACCATGCTCAATAGGTTGGTATTTGCGTGAAAGGGATGGGACGTG
ACGCGAACGTGAGCTCACAATAGCCGAATGCTTTCATTTCACTGTTCACG
CACATCGAACATACATAATTTTACTTTGTGCGTCCTTACTCACTTCTTGA
TGTTCTTTGCATTGCAGGAGCTCTCAGCAGCACCGTGATGGACACGGCCG
AGTCACAGGTCCTGCCTGCAGCAACGTGGTATCACCCTCTGGCGCTGGGC
TTCCCATGTACCCCCAATATATCCCACAACAACCTGAATACGACAGGTAG
GCACCCCACCCCCTCTCCTCAGCTCAGCAAAGTTTAGGTTAGGTTCGTCC
CAGCCCCGGCCCTGCTAACTAAACTAAAACCCATGCCTTCTCCGCTCCGT
TGAGTAGCAGTGGGCCACTTGGGGGCTGTAATATTGTATTTGACAATCCA
GTAGGGCGCCCTGCCACTAGCGCAACCATCAAAGCTCCTCGCTCCGAGCG
GGATCGCCTTCCTTCACACATAAACCACGCAGGAGACAACGCTGAGCTGA
CACTGCCAGATTTGGCAGGTGAGAGCAGCAACTTTTATTGAAGTCTAGTC
ACCTCGATTGTACCCATTATTCATTTACCCGTCATTTCTTGAACTAGCTC
TTAATAGGTGTACTTGACTCACTTGTCTGTCCTAATCTGCTTCTCAGGCC
TGAGCCTATCTTGATACAGCCTCGCCTTGACTGGTATGATCAAGAGCGTG
CACGTTTTCACCTTTTTAAAGACATCCATCGCACTGGTGGCACTGGTGGC
AAAGTTTCAACCCATCAACTGCCACTTGACTTTCAGCGGTCCAGCAGCCG
CCAGCCTTTTTTCGTTACCCTTGTAAGCTCTCTTCACTTCCACGTCAATC
ACCACCCTTTCATCAGTTCCACGCTCACCTTTGTTCATCTGCTTATCCCA
CAGGAGCGTTTTTTTTGTCTCTGCTCGATGAAGCGCCTGCAGCTTGAGAA
AATATTTGTTGTGCTGCATTAGGCCTTCGTGAGCCAGTTTAGATAAGCAA
GTTTCATTCAGTAGATCAGCCGTGTTTTAAGGAGACCATGCTTTGCATTT
GTCCTCCAGCCTGTGATACGCACATGAGGTAGTAGTCCTTACACCATCCA
AGGGTCTTTTTTTAAGGTGCTATTTCATTTCTTCATTTCGCTCACTTTTT
GCATTTTTTTTGTCTCTGCTCGATGAAGCGCCTGCAGCTCAAGAAATATT
TGTAGTGTTGCATAGGCCTACGCGAGCCAGTTTAGATAAGCAAGTTTCAT
TCAGTAGATCAGCCATGTTTAAGGAGACTGTGCTTGCATTGTCCCTTAGT
CTGTGTATATAGATGAGGTAGTAGTCCTTACACCATCCAAG
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Coding sequence (CDS) from alignment at C-australica_Contig_996:13513..17503-

>mRNA_C-australica_Contig_996.7.1 ID=mRNA_C-australica_Contig_996.7.1|Name=mRNA_C-australica_Contig_996.7.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1419bp|location=Sequence derived from alignment at C-australica_Contig_996:13513..17503- (Chrysoparadoxa australica CS_1217)
ATGCTCAAGCTTTTGGACATCGAAGAAGACCCCATGGATCACAGCCATTC
TTCGAGGCATTCCCAGGCTACCCTTGTGGAGGAGTACACGCCGCCGGAGC
ATTCCGCTAGTCGTCCACCGCTAGAGGGCGCCTCTATGATGGCACCACCG
GCACCGCAACCACCATACGCCCCAGTCAACGTGTTGGCCTATGTCAATGA
CAACAGCATGTACCAGCAGATAAATCCAGTGCGTGTCACTCCGCAGAACA
ATCTCATAGTTAACTATCTGCCGCCTGATGTCACTAGCTCTGACTTACGG
CGTGTTTTTGAGGTACACGGCCCGCTGGTGAGCGTCAAGGTTGTTTCAGA
GCGCGCAACAGGAAAGTCAATGGGATACGGGTTTGTGAGATTTCACAACT
CCTCGGATGCCGCTGCTGCCCTTGAGGCCATGTCTGGCATGCAGATTGGA
AACAAGCGAATTAAGGTAGTCAGCATTGCTCGCCCAAGCAGCAAAGACAT
CAAGGGAAGCAAGCTGTATGTTACCCACTTGCCTGAGTTCTATGGCCAAG
AGCAGGTCTTGCATCTTTTCTCGCCATACGGTGCTATCATCGAGTGCAGG
TCATTAGTGGACAGGAGGACTGGGCTGAGCAGATGCACTGCGTTTGTTCA
GTTTGATAAGAGATCAGAGGCAAAGAGGGCTTTAGTGCTCAATGGTGCAA
CGCTTGAGGGGGGGAGGAGGTCCCTGCTGGTAAAGTTTGCAGAGCAGCAT
CAAAAGGCTCCTGGCCGTGGTGGCTGGGATGCGCCTGTTGCGGAGAGAGA
CTTCCTAGATCGCAATGCGATGATGTCACGTGAAGTGGGGGGAGGAGTAC
ACAGGCACTTGAAGCAGCAACATGAGGACCTGTCGCAGCTTCACGCGTCG
GCTTTTTCGGGGTACACCTCATATGCCAGCAACAACAGCTTACGGCTCAG
TTCATACGGGAGCGACAGCAGTGGGCTAGATGGTGCGTCTCGGTATTACG
GTGACAGCAGCAGAGGCAGCCACAGTAACGGTCACGTGGGACTAAGCATC
GGGATGCAGTCTACGGCGGGTGTCCCTGTGGACAATGCAGGGTACCAGAC
CATGCTCAATAGGAGCTCTCAGCAGCACCGTGATGGACACGGCCGAGTCA
CAGGTCCTGCCTGCAGCAACGTGGTATCACCCTCTGGCGCTGGGCTTCCC
ATGTACCCCCAATATATCCCACAACAACCTGAATACGACAGCAGTGGGCC
ACTTGGGGGCTGTAATATTGTATTTGACAATCCAGTAGGGCGCCCTGCCA
CTAGCGCAACCATCAAAGCTCCTCGCTCCGAGCGGGATCGCCTTCCTTCA
CACATAAACCACGCAGGAGACAACGCTGAGCTGACACTGCCAGATTTGGC
AGGCCTGAGCCTATCTTGA
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