mRNA_C-australica_Contig_996.5.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_996.5.1 vs. uniprot
Match: A0A0C2M242_9CYAN (Ankyrin n=2 Tax=Scytonemataceae TaxID=1182 RepID=A0A0C2M242_9CYAN) HSP 1 Score: 63.9 bits (154), Expect = 1.240e-7 Identity = 37/100 (37.00%), Postives = 59/100 (59.00%), Query Frame = 2 Query: 458 MMREAAECGDVERLSELIKVGLPINAPDGIGFTPLLYACGSGRVEAARLLLDSGSDCNYGAGT--VTGLGLASKRGALDVVKLMLQRGARVAATDETGKT 751
++ A + GD++++ L+ G ++ D G TPL++A G E AR LLD+G+D + +T L LA+ LD+VKL++ +GA V AT+E G T
Sbjct: 8 LLLSAVKNGDIKQVQALLNDGANVDTGDRDGTTPLMFAAHFGYTEIARSLLDAGADLDLKRKRYKLTALMLAASANQLDIVKLLVSKGADVNATNEDGST 107
BLAST of mRNA_C-australica_Contig_996.5.1 vs. uniprot
Match: A0A856M954_9CYAN (Ankyrin repeat domain-containing protein n=3 Tax=Brasilonema TaxID=383614 RepID=A0A856M954_9CYAN) HSP 1 Score: 62.4 bits (150), Expect = 3.940e-7 Identity = 36/100 (36.00%), Postives = 58/100 (58.00%), Query Frame = 2 Query: 458 MMREAAECGDVERLSELIKVGLPINAPDGIGFTPLLYACGSGRVEAARLLLDSGSDCNYGAGT--VTGLGLASKRGALDVVKLMLQRGARVAATDETGKT 751
++ A + GD++++ L+ G ++ D G TPL++A G E R LLD+G+D + +T L LA+ LD+VKL++ +GA V AT+E G T
Sbjct: 8 LLLSAVKNGDIKQVQALLNDGANVDTGDRDGTTPLMFAAHFGYTEIGRSLLDAGADFDLKRKRYRLTALMLAASANQLDIVKLLISKGADVNATNEDGST 107
BLAST of mRNA_C-australica_Contig_996.5.1 vs. uniprot
Match: UPI00145CE4EE (ankyrin repeat domain-containing protein n=1 Tax=Brasilonema sp. UFV-L1 TaxID=2234130 RepID=UPI00145CE4EE) HSP 1 Score: 61.6 bits (148), Expect = 7.010e-7 Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = 2 Query: 458 MMREAAECGDVERLSELIKVGLPINAPDGIGFTPLLYACGSGRVEAARLLLDSGSDCN-----YGAGTVTGLGLASKRGALDVVKLMLQRGARVAATDETG 745
++ A + GD++++ ++ G ++ D G TPL++A G E AR LLD+G+ N YG +T L LA+ LD+VKL++ RGA V AT+E G
Sbjct: 8 LLLSAVKNGDLKQVQAVLNDGATVDTGDRDGTTPLMFAAHFGYTEIARSLLDAGATLNLKRKRYG---LTALMLAASAKQLDIVKLLVSRGADVNATNEDG 105
BLAST of mRNA_C-australica_Contig_996.5.1 vs. uniprot
Match: R7V436_CAPTE (Uncharacterized protein (Fragment) n=1 Tax=Capitella teleta TaxID=283909 RepID=R7V436_CAPTE) HSP 1 Score: 56.2 bits (134), Expect = 2.300e-6 Identity = 41/104 (39.42%), Postives = 55/104 (52.88%), Query Frame = 2 Query: 470 AAECGDVERLSELIKVGLPINAPDGIGFTPLLYACGSGRVEAARLLL--DSGSDCNY--GAGTVTG---LGLASKRGALDVVKLMLQRGARVAATDETGKTALH 760
A E G + +SELI +G +N G+TPL +A + +LLL +GS N G G TG L LAS G + ++++L GA V ATD G TALH
Sbjct: 11 ACEAGHEKTVSELISLGADVNVRKSNGWTPLHWAAQNDFPVIVKLLLLLSAGSKVNATKGQGVTTGITSLHLASALGHAETLRILLNAGADVEATDHFGFTALH 114
BLAST of mRNA_C-australica_Contig_996.5.1 vs. uniprot
Match: UPI000552EF3F (ankyrin repeat domain-containing protein n=1 Tax=Cohnella thermotolerans TaxID=329858 RepID=UPI000552EF3F) HSP 1 Score: 57.0 bits (136), Expect = 3.630e-6 Identity = 43/106 (40.57%), Postives = 55/106 (51.89%), Query Frame = 2 Query: 467 EAAECGDVERLSELIKV--GLPINAPDGIGFTPLLYACGSGRVEAARLLLDSGSDCN---------YGAGTVTGLGLASKRGALDVVKLMLQRGARVAATDETGKT 751
+AA+ GD ERL L+K GL NA + G T L YA G +A LLDSG+D N + T LA +R A DV++L+L+RGAR D G T
Sbjct: 9 QAAQAGDAERLKALLKADPGLA-NAENSDGLTLLGYAAHFGHRDAVLALLDSGADVNAISHSKIAYIPSNTALHAALAGERNA-DVIRLLLERGARTDLLDSNGHT 112
BLAST of mRNA_C-australica_Contig_996.5.1 vs. uniprot
Match: UPI001478F2D4 (transient receptor potential channel pyrexia-like isoform X1 n=2 Tax=Osmia TaxID=124287 RepID=UPI001478F2D4) HSP 1 Score: 59.7 bits (143), Expect = 4.390e-6 Identity = 39/101 (38.61%), Postives = 59/101 (58.42%), Query Frame = 2 Query: 470 AAECGDVERLSELIKVGLPINAPDGIG-FTPLLYACGSGRVEAARLLLDSG---SDCNYGAGTVTGLGLASKRGALDVVKLMLQRGARVAATDETGKTALH 760
A+ G+V + LI+ G+ IN + I +TPL +A V+AAR+LLD+G S C Y L A + A+++V+L+L+RGA V + TG+T LH
Sbjct: 275 ASLSGNVACIEHLIEKGVDINCRNPINHYTPLHFAVLGNSVDAARVLLDNGAKPSTCLYQEMVEPVLHCAIRAAAVEIVELLLERGASVVEKNHTGETPLH 375
BLAST of mRNA_C-australica_Contig_996.5.1 vs. uniprot
Match: A0A2K0T609_9HYPO (Uncharacterized protein n=1 Tax=Trichoderma gamsii TaxID=398673 RepID=A0A2K0T609_9HYPO) HSP 1 Score: 58.2 bits (139), Expect = 1.440e-5 Identity = 35/97 (36.08%), Postives = 53/97 (54.64%), Query Frame = 2 Query: 470 AAECGDVERLSELIKVGLPINA--PDGIGFTPLLYACGSGRVEAARLLLDSGSDCNYGAGTVTGLGLASKRGALDVVKLMLQRGARVAATDETGKTA 754
AA D +++ +L+ ++A PDG G TPL+ AC +G V R LL+ G + N A T L A + +VVKL++ RGA+ + + G TA
Sbjct: 1098 AASAKDHKKIVQLLIEEHKVDAEIPDGNGITPLIAACQAGHVRTTRYLLEKGVNVNRAAKDTTPLQAARSKDHEEVVKLLVDRGAKESVVEPNGVTA 1194
BLAST of mRNA_C-australica_Contig_996.5.1 vs. uniprot
Match: R7V911_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7V911_CAPTE) HSP 1 Score: 55.1 bits (131), Expect = 1.920e-5 Identity = 37/99 (37.37%), Postives = 54/99 (54.55%), Query Frame = 2 Query: 470 AAECGDVERLSELIKVGLPINAPDGIGFTPLLYACGSGRVEAARLLLDSGSDCNYGA--GTVTGLGLASKRGALDVVKLMLQRGARVAATDETGKTALH 760
AA + +RL +L+K P N+ D G++ L YA +G + A +LL G+ N G T L A+ G ++VVKL+L +GA D G+TALH
Sbjct: 32 AALSNETDRLQDLLKHTDP-NSLDSSGYSALHYAARNGHLNACVMLLKHGAKVNIKTRTGKATPLMRAAYCGHVEVVKLLLSKGANPLTQDSDGRTALH 129
BLAST of mRNA_C-australica_Contig_996.5.1 vs. uniprot
Match: UPI0014432715 (uncharacterized protein LOC117229631 n=1 Tax=Megalopta genalis TaxID=115081 RepID=UPI0014432715) HSP 1 Score: 57.8 bits (138), Expect = 2.080e-5 Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 2 Query: 470 AAECGDVERLSELIKVGLPINAPDGIGF-TPLLYACGSGRVEAARLLLDSGSD---CNYGAGTVTGLGLASKRGALDVVKLMLQRGARVAATDETGKTALH 760
A+ G+V + LIK G +N + I + TPL +A +AAR+LLD+G+ C Y L A + GA+++VKL+L RGA V + G+T LH
Sbjct: 1546 ASLSGNVTCIEHLIKQGADVNCRNPINYYTPLHFAIHRNSADAARVLLDNGAKPTTCLYQEIVEPVLHSAIRAGAVEIVKLLLDRGASVVEKNHMGETPLH 1646
BLAST of mRNA_C-australica_Contig_996.5.1 vs. uniprot
Match: UPI0013040C25 (uncharacterized protein LOC116427990 n=1 Tax=Nomia melanderi TaxID=2448451 RepID=UPI0013040C25) HSP 1 Score: 56.6 bits (135), Expect = 4.800e-5 Identity = 37/101 (36.63%), Postives = 58/101 (57.43%), Query Frame = 2 Query: 470 AAECGDVERLSELIKVGLPINAPDGIG-FTPLLYACGSGRVEAARLLLDSGSDCN---YGAGTVTGLGLASKRGALDVVKLMLQRGARVAATDETGKTALH 760
A+ G+V + LIK+G +N + I +TPL +A V+AAR+LLD+G+ Y L A + A+++VKL+L+RGA + + G+TALH
Sbjct: 1262 ASLSGNVACVEHLIKIGADVNCRNPINHYTPLHFAIYRNSVDAARVLLDNGAKPTTYLYQEIVEPVLHSAIRSDAVEIVKLLLERGASIVEKNHMGETALH 1362 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_996.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_996.5.1 >prot_C-australica_Contig_996.5.1 ID=prot_C-australica_Contig_996.5.1|Name=mRNA_C-australica_Contig_996.5.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=265bp MEQAATLAKLKVQCEQTGNELADAEAMLRERHTDTTLGSSTAKMRALHRLback to top mRNA from alignment at C-australica_Contig_996:11562..13243- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_996.5.1 ID=mRNA_C-australica_Contig_996.5.1|Name=mRNA_C-australica_Contig_996.5.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1682bp|location=Sequence derived from alignment at C-australica_Contig_996:11562..13243- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_996:11562..13243- >mRNA_C-australica_Contig_996.5.1 ID=mRNA_C-australica_Contig_996.5.1|Name=mRNA_C-australica_Contig_996.5.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=795bp|location=Sequence derived from alignment at C-australica_Contig_996:11562..13243- (Chrysoparadoxa australica CS_1217)back to top |