Homology
BLAST of mRNA_C-australica_Contig_995.5.1 vs. uniprot
Match:
A0A6G0XIB7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIB7_9STRA)
HSP 1 Score: 61.6 bits (148), Expect = 5.570e-7
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 3
Query: 270 PQRLTLGLIQSCLALSTPETDDDKENDDYTGLLNTTSLRLGWQKIEVIENLDMFTSLRELYLQHNNI 470
P ++ + LI+ C+ L+ TDD++ + LL T LRL WQ+I IENLD+F+ +RELYLQHN I
Sbjct: 22 PAKINMLLIRKCMNLTRDSTDDEEASQ----LLLKTVLRLDWQRIGKIENLDVFSHIRELYLQHNLI 84
BLAST of mRNA_C-australica_Contig_995.5.1 vs. uniprot
Match:
A0A485LBW6_9STRA (Aste57867_19032 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LBW6_9STRA)
HSP 1 Score: 60.5 bits (145), Expect = 1.400e-6
Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 3
Query: 270 PQRLTLGLIQSCLALST-PETDDDKENDDYTGLLNTTSLRLGWQKIEVIENLDMFTSLRELYLQHNNI 470
P ++ + LI+ C+ L P + DD + + LL T+LRL W I IENLD+F+ +RELYLQHN I
Sbjct: 17 PTKINMQLIRKCMNLPRGPTSADDDPDAEVDALLKKTTLRLDWLNIGKIENLDVFSHIRELYLQHNAI 84
BLAST of mRNA_C-australica_Contig_995.5.1 vs. uniprot
Match:
A0A024TZL3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZL3_9STRA)
HSP 1 Score: 59.7 bits (143), Expect = 2.690e-6
Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 3
Query: 270 PQRLTLGLIQSCLAL--STPETDDDKENDDYTGLLNTTSLRLGWQKIEVIENLDMFTSLRELYLQHNNI 470
P R+ + LI+ C++L S T D ++ + LL T LRL WQ I IENLD+F+ +R+LYLQHN I
Sbjct: 26 PVRINMQLIRKCMSLPPSAHATAVDDDDAEVESLLAKTVLRLDWQGISKIENLDVFSHIRDLYLQHNAI 94
BLAST of mRNA_C-australica_Contig_995.5.1 vs. uniprot
Match:
A0A1W0ACD8_9STRA (Leucine-rich repeat-containing protein 46 isoform X1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ACD8_9STRA)
HSP 1 Score: 55.5 bits (132), Expect = 5.210e-5
Identity = 95/202 (47.03%), Postives = 121/202 (59.90%), Query Frame = 3
Query: 291 LIQSCLALSTPETDDDKENDDYT-GLLNTTSLRLGWQKIEVIENLDMFTSLRELYLQHNNITHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVEELRCLQGLRSLEIRHNSVCEADNFHSRLLHDLLPNLLELNCRQTAPVAVDITVHEEDGTSKVVPLEVSAFDCMCDLARELCDEHGLIGQE 893
+I+ ++++ E D++NDD LL + LRL W + IENLD FT +RELYLQHN I +XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D++EL Q L L + N ++ + ++++ D LPNLL+ DG + P +S D EL +EH L QE
Sbjct: 3 VIRKAMSMAKDEALIDQDNDDEVENLLKRSVLRLDWLNVSKIENLDAFTHIRELYLQHNLIA-VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEELDLDELP--QSLLVLRVTGNPWADSRDNYAQICFDHLPNLLQC-----------------DGYRRNDPARLSPTHLHSDRHAELMEEHKLEEQE 184
BLAST of mRNA_C-australica_Contig_995.5.1 vs. uniprot
Match:
T0R6H2_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0R6H2_SAPDV)
HSP 1 Score: 55.5 bits (132), Expect = 5.660e-5
Identity = 35/71 (49.30%), Postives = 41/71 (57.75%), Query Frame = 3
Query: 270 PQRLTLGLIQSCLALSTPETDDDK----ENDDYTGLLNTTSLRLGWQKIEVIENLDMFTSLRELYLQHNNI 470
P +LT+ LI+ + L PET D E D+ LL LRL W I IENLD FT +RELYLQHN I
Sbjct: 5 PVKLTMQLIRKSMQLR-PETAIDDGLAVEGDEVEHLLTRNVLRLDWLGIGKIENLDAFTHVRELYLQHNAI 74
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_995.5.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 5
0 1 Expect = 5.57e-7 / Id = 47.76 Expect = 1.40e-6 / Id = 45.59 Expect = 2.69e-6 / Id = 46.38 Expect = 5.21e-5 / Id = 47.03 Expect = 5.66e-5 / Id = 49.30 Sequence A0A6G0XIB7_9STRA A0A485LBW6_9STRA A0A024TZL3_9STRA A0A1W0ACD8_9STRA T0R6H2_SAPDV back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 1 Seed ortholog 157072.XP_008871979.1 PFAMs LRR_4,LRR_9 Model size 1218 Max annot lvl 2759|Eukaryota KEGG ko ko:K10411 KEGG Pathway ko05016,map05016 Hectar predicted targeting category signal peptide Exons 10 Evalue 1.46e-07 EggNOG OGs COG4886@1|root,KOG0531@2759|Eukaryota Ec32 ortholog description Hypothetical leucine rich repeat protein Ec32 ortholog Ec-00_000990.1 Description axoneme assembly Cds size 957 COG category L BRITE ko00000,ko00001,ko04812
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682588862.7443492-CDS-C-australica_Contig_995:15263..15305 1682588862.7443492-CDS-C-australica_Contig_995:15263..15305 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_995 15264..15305 - 1682588862.755875-CDS-C-australica_Contig_995:15379..15430 1682588862.755875-CDS-C-australica_Contig_995:15379..15430 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_995 15380..15430 - 1682588862.7653463-CDS-C-australica_Contig_995:15624..15744 1682588862.7653463-CDS-C-australica_Contig_995:15624..15744 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_995 15625..15744 - 1682588862.7751484-CDS-C-australica_Contig_995:15823..15922 1682588862.7751484-CDS-C-australica_Contig_995:15823..15922 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_995 15824..15922 - 1682588862.7848995-CDS-C-australica_Contig_995:16058..16157 1682588862.7848995-CDS-C-australica_Contig_995:16058..16157 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_995 16059..16157 - 1682588862.796805-CDS-C-australica_Contig_995:16244..16313 1682588862.796805-CDS-C-australica_Contig_995:16244..16313 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_995 16245..16313 - 1682588862.8101382-CDS-C-australica_Contig_995:16491..16597 1682588862.8101382-CDS-C-australica_Contig_995:16491..16597 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_995 16492..16597 - 1682588862.8202672-CDS-C-australica_Contig_995:16731..16820 1682588862.8202672-CDS-C-australica_Contig_995:16731..16820 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_995 16732..16820 - 1682588862.829316-CDS-C-australica_Contig_995:16895..17046 1682588862.829316-CDS-C-australica_Contig_995:16895..17046 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_995 16896..17046 - 1682588862.8379574-CDS-C-australica_Contig_995:17122..17253 1682588862.8379574-CDS-C-australica_Contig_995:17122..17253 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_995 17123..17253 -
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682588862.846985-UTR-C-australica_Contig_995:17253..17513 1682588862.846985-UTR-C-australica_Contig_995:17253..17513 Chrysoparadoxa australica CS_1217 UTR C-australica_Contig_995 17254..17513 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_995.5.1
>prot_C-australica_Contig_995.5.1 ID=prot_C-australica_Contig_995.5.1|Name=mRNA_C-australica_Contig_995.5.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=319bp
MSHPQRLTLGLIQSCLALSTPETDDDKENDDYTGLLNTTSLRLGWQKIEV back to top mRNA from alignment at C-australica_Contig_995:15264..17513-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_995.5.1 ID=mRNA_C-australica_Contig_995.5.1|Name=mRNA_C-australica_Contig_995.5.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2250bp|location=Sequence derived from alignment at C-australica_Contig_995:15264..17513- (Chrysoparadoxa australica CS_1217)GGCCTAACTTGAAGTGCTTCGTGAGATATGTCGGTTTTTGTGACTTCCGA
CAGCTGATCGTTTATCGAGCCCCTTTTGAAAAAATTGGAGTAAGAGCTCC
TCGACGGGTCCTCGCGCCTAGGGATGTGTCCAACCTCAAGGCAGAGCATC
TCCCTCCACTCTCCAGCCTCCCTCAGTAGATTCACTGCTTCTGCTTCTCC
CCATTGCTCCTTGCATGCCAGCCTCCTAACGCACGCACCTTGCAACGGTT
TGGCCCAGCG ATGAGTCACCCTCAGAGACTCACGCTGGGATTGATTCAGT
CATGCTTAGCGCTGAGCACCCCCGAGACTGACGACGACAAGGAGAACGAT
GATTATACTGGGCTCCTCAACACGACATCACTTAGGCTGGG GTATGCTTC
TCTCTCTTCCTTCGCTCTCTCTTCCTCCCTGGCATGACTACCTCTCCCCA
CCCCCGTACTACACAAGGTGGCAAAAAATAGAGGTGATTGAGAACCTGGA
CATGTTCACTTCACTGCGGGAGTTATACCTTCAACACAACAACATAACAC
ATATTACGGGATTAGATACTCTCCTCAACCTCAAGCTTCTTTCATTGGGG
CATAATAGAATAGCCAAG GTAATCAATCTCCTGTAACCTGCGTGCACCCA
CGCTGCTACTGTGACACAAACACACCACTCCGTTCTTGGGCAGGTCTCAG
GACTGAAGCCACTGAAGAAGCTCGTACTGCTTGATTTGTCACACAATCAG
CTCTCAAACGAGTCAGACGTGGAAGAGCTCAG GTATGTCCTCCAGTGACA
GAACGATGCTGAGTGGGACCAAAACGAGACCGCTATATACTAACCTTACC
AGACTAATCATCTTTGACAGCACCTGCTCTCTATCTCTCACTAGTCATCT
CTGATCATCTGACCAGGTGCCTGCAAGGCCTCCGCTCGTTAGAGATACGT
CACAACTCGGTGTGCGAGGCTGACAATTTCCACAGCAGGCTACTGCATGA
CCTCCTGCCCAACCTGCTAGAG GTACGCCTTGCCCTGGGAGTCTTGGAAC
CGTCTCTTGGGACTTGACCGTGTACTATATAGATCCAACACAGCGCTTTC
CATCTGTCCAGCTCAGCCTCAAGTGACTACTGGACTGTCTTGTCTTAATC
TAATTGACTGCTGAGTTAGCTAAACCATGGATGGATTTGCCCTCCTTCAG
CTCAATTGTCGGCAAACGGCTCCGGTGGCAGTGGACATCACCGTGCATGA
AGAAGATGGCACCTCTAAG GTACGTACGGCTCTTCCCCCTCTCACAGCGT
CTGCATTATCGACACATGCCTCAAGTAGAGCACCTCAAACGCCCCCATCA
CAACAGGTTGTGCCACTGGAGGTGTCCGCCTTTGACTGCATGTGTGACTT
GGCGAGGGAGCTCTGTGATGAGCATGGGCTAATCGGGCAGGAGGATGCAC
TGCAA GTGAGCAACTTTGGCTTTCATCTCTAAAGCTGACCCTTGGAGACA
TCTAACATTTAACTTGAATATAGTCGTGTGGCTGACTGACGCCTGTATCT
CTGACTTTACCTTATTATTAATCCTTCTTTTTAACCACTAGGCGGAGCTA
GAAGGTGCTTTGCGAAAGGAAAACAGGCGGAACCGGGTGCTGGGAGTGGG
AGAAGCAAAGAAAGAGCTGGGAGAGGGACAGGACAGGGAG GTGATGCTTG
GCCTCATCCCAACTCTTGCAGCTGACAACTGAGATCATGCCTCACCGGTT
GACCTTGCAACTTTATCAGGTTACGGCGCTGCAAGACATTGAGCGTGCCC
AGGAGGCCTTCAGGACAGAGACGGAGCGGATGTTTGGGGAGGTGAAGGAG
GGCATCCTGAGGGAGGCTCGTGCAAAGGCTCAGACCAAG GTAGCAGGCTG
AACCTGAAGCAAACACAAGCTCTCACATATCGTTTAGCATTGACTGAGGC
CTTGTTGCGACTAGCAACACAGTGTGGCCTTGATACCCCATTCCCGCTGC
ATAGCTAACCGAATCTAAAATATATAATATACCTCTGATGACACCTGCCA
TGACCTTTCCTGTTTTGCATCTGCTCTATCAAGGTGGCTGCTGCAAGAGC
AAGAGGGGAGGAGCATTCGGAGGAGGTTGCCAAG GTAGCATAAGCTCTGT
CTTTCTTTTATTCACTTGGTCACTGCCATTCACTCTGCTGACATTGCCAA
CTTTTTAGATAATCCAACAAGCGAGGGACCAATTTAAACACCACAGAGAG
back to top Coding sequence (CDS) from alignment at C-australica_Contig_995:15264..17513-
>mRNA_C-australica_Contig_995.5.1 ID=mRNA_C-australica_Contig_995.5.1|Name=mRNA_C-australica_Contig_995.5.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=957bp|location=Sequence derived from alignment at C-australica_Contig_995:15264..17513- (Chrysoparadoxa australica CS_1217) back to top