mRNA_C-australica_Contig_988.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_988.1.1
Unique NamemRNA_C-australica_Contig_988.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
[Close]
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A6H5KT38_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT38_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 1.180e-40
Identity = 94/212 (44.34%), Postives = 128/212 (60.38%), Query Frame = 3 
Query: 1137 EEAAAKKKTYDETPRVHAGFRGAMCGIQETTAAAVMFATGGVPEGWHIYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISF-LEYSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDIDTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSYYAAL 1769
            EEAAA K    + PR+HAGFR A   +  T +A +  A  G PE WH+Y+TGHSLGGALATL  +D   R+  +K+TMYNFGSPRVGN AFA LY+     +FR+VN++D++AR+P        L+Y H GRTV+V E   E             W++GE  G CPL++ D + +           E+D ++AL+ G  I HH+E +Y+AAL
Sbjct:  936 EEAAAAK----DPPRIHAGFRRAYVSVNGTLSAVLGSAMEGKPEDWHVYITGHSLGGALATLATLDHCRRYPEAKVTMYNFGSPRVGNKAFAELYDSFVGDSFRVVNNLDIVARMPRATMGGISLDYQHCGRTVMVAEDPEEPP-----------WIQGESGGECPLEETDPVMLLTQGKTDFFSAEIDFMKALLSGKGIDHHMEYNYFAAL 1132
[Close]
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A7S0LWE7_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LWE7_9CRYP)

HSP 1 Score: 144 bits (362), Expect = 3.500e-36
Identity = 84/168 (50.00%), Postives = 107/168 (63.69%), Query Frame = 3 
Query: 1278 IYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLEYSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDIDTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSYYAALVPAL 1781
            + VTGHSLG ALATLCA D A  F  +++TMYN+GSPRVGN AFARL++     AFRIVND D++AR+P  +    L Y HVGRTVLV    ++GK         ++WVEGE  G+ PLK+        T   + +  EL  +Q LV G SIA H+ED+Y+ ALV AL
Sbjct:    2 VLVTGHSLGAALATLCAADIAPLFPGARVTMYNYGSPRVGNRAFARLFDTLVPDAFRIVNDADLVARVPRTR---LLNYRHVGRTVLV--SAQQGK---------RIWVEGESEGSDPLKE------RWTELSELLEAELSLMQGLVGGGSIADHMEDAYFRALVQAL 149
[Close]
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: D8LR60_ECTSI (Lipase domain protein, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR60_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.910e-35
Identity = 73/168 (43.45%), Postives = 102/168 (60.71%), Query Frame = 3 
Query: 1257 GVPEGWHIYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISF-LEYSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDIDTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSY 1757
            G PE WH+Y+TGHSLGGALATL  +D   R+  +K+TMYNFGSPRVGN AFA LY+     +FR+VN++D++AR+P        L+Y H GRTV+V E   E             W++GE  G CPL++ D + +    +      E+D ++AL  G  I HH+E ++
Sbjct:    3 GKPEDWHVYITGHSLGGALATLATLDHRRRYPEAKVTMYNFGSPRVGNKAFAELYDSFVGDSFRVVNNLDVVARMPRATMGGISLDYQHSGRTVMVAEDPEEPP-----------WIQGESGGECPLEETDPVMLLTQGNTDFFSAEIDFMKALFSGKGIDHHMEHNW 159
[Close]
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: L1J5S5_GUITC (Lipase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J5S5_GUITC)

HSP 1 Score: 155 bits (392), Expect = 4.080e-35
Identity = 130/445 (29.21%), Postives = 197/445 (44.27%), Query Frame = 3 
Query:  549 IAFIDNRSSDTQCLMWRDKANKRLIASFRGTESV--KDMITDLYGIQEPYDSKQSQ---------LERSYSNMVAQFDEELKKGRNE------------GLAWLRELWKQ-RPGSGRKDIK--RLGSGATGEGKACEESRLEEVKEAALAVSTKEGRSVIESWYDEALVALSDPGKHVPPLPKISSLRGFDMKGAEAKGKSLIGKVRNSFSATRKWIARDLKEEAAAKKKTYDETPRVHAGFRGAMCGIQETTAAA--VMFATGGVPEG-WHIYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLEYSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDIDTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSYYAALVPALKLQVV 1796
            + FIDN+ +DTQ  +WRD+  KR++ +FRGTE    KD +TD    Q+ +D              L  + +++  + +  +++GR E             L  L  + KQ +  +G  D K   +   A  E    E   + E+ E+ L ++ K                     K           +G  M G  +                         ++      T +E P VH GF      ++        V+  + G   G W I+VTGHSLGGAL+TLCA D A  F  S + MYNFGSPRVGN  F +++N+    AFR+VND D++AR+P  +    + Y HVGRT LV                  +WVEGE +G+ PLK+        T   + +  E+  LQ +V GNS+  H+ED+Y+ +L  AL+ + +
Sbjct:  493 LCFIDNQETDTQVTLWRDQKGKRVVLAFRGTEQTRWKDFLTDALITQQRFDPGSDPEEDIELPPLLASATASVAKKAEGTIEEGRGELIAVGSLGMLSQNLLSLESISKQVQQLTGSDDYKFGEMSRRALREVTGKEFKDMSEMAESTLNMAQKXXXXXXXXXXXXXXXXXXTLWKKAEGXXXXXITKGI-MDGISSXXXXXXXXXXXXXXXX-------TGQQNLPSSDTEEELPAVHVGFLRGYSSVRRRILQVLQVLLESEGAGGGEWKIFVTGHSLGGALSTLCAADVAALFPQSAVVMYNFGSPRVGNLKFVQMFNQLVPEAFRVVNDADVVARVPRSR---LMNYHHVGRTALVSSSSS-------------VWVEGESAGSDPLKE------RWTELSQLVDAEISLLQGIVNGNSLEDHMEDAYFLSLTRALEARAL 907
[Close]
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A7S1H6Z8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H6Z8_HEMAN)

HSP 1 Score: 140 bits (352), Expect = 1.310e-34
Identity = 78/174 (44.83%), Postives = 104/174 (59.77%), Query Frame = 3 
Query: 1269 GWHIYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLEYSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDIDTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSYYAALVPALKLQ 1790
            GW IYVTGHSLGGAL+T+CA D A+++   K+  YN+GSPRVGN+ F + +N+    AFR+VND D++AR+P  +     +Y HVGRT LV      G+          LWVEGE  GT PL+D        +   + +  E+  LQ LV G S+  H+ED+YY AL  AL  Q
Sbjct:    1 GWTIYVTGHSLGGALSTICAADMAEKYPGCKVVNYNYGSPRVGNAPFVQGFNQAVPEAFRVVNDADVVARVPRSRGF---DYYHVGRTALVSRSGGGGRGS--------LWVEGESEGTDPLRD------RWSNLSELLDAEVAFLQGLVKGESLGDHMEDAYYEALQQALSAQ 157
[Close]
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A0G4EHV0_VITBC (C2 domain-containing protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EHV0_VITBC)

HSP 1 Score: 145 bits (366), Expect = 7.650e-32
Identity = 93/225 (41.33%), Postives = 118/225 (52.44%), Query Frame = 3 
Query: 1176 PRVHAGFRGAMCGIQETTAAAVMFATGGVPEGWHIYVTGHSLGGALATLCAVDFADRFKAS---------KLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLEYSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPL-------KDIDTLEVFKTRD-------DKAIRNELDKLQALVMGNSIAHHLEDSYYAALVPAL 1781
            PRVHAGF  A   I+      +  ATGG    W + VTGHSLGGALATLCA D A     S         K+ +YN+G+PRVGN AF   +N K   AFR+VN  D+IARLP       L+Y HVGRTVLV E    G+ +        LW+EGE  G  PL       KD +   VF  R        ++ I  E+  L  +  G +++HH ED Y+AA+  A+
Sbjct:  836 PRVHAGFHQAYLSIRSRLHELIHEATGGQAGEWEVLVTGHSLGGALATLCAYDMATHGPVSRGEARGPPGKVLLYNYGAPRVGNGAFVEKFNAKIGDAFRVVNSRDVIARLPRGATAWILDYEHVGRTVLVDEA---GQTN--------LWIEGETEGPNPLQEANPWGKDENGTLVFLGRSVELPRLTEEFIDREVAMLNTITNGEALSHHFEDQYHAAMTVAV 1049
[Close]
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A7S0YX09_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YX09_9CRYP)

HSP 1 Score: 124 bits (311), Expect = 1.070e-28
Identity = 81/204 (39.71%), Postives = 107/204 (52.45%), Query Frame = 3 
Query: 1176 PRVHAGFRGAMCGIQETTAAAVMFATGGVPEGWHIYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLE----YSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDI--DTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSYYAAL 1769
            P  H GF  A   ++E+    +        EG+ +++TGHSLGGALATLCAVD   R     +TMYNFGSP+VG+ AF   YN     +FR+VND D+ ARLP  + I  +     Y HVGRTVL    ER            K WVEGE +G  PLKD   D  E+           E+  +Q ++ G     H+E+ Y+AA+
Sbjct:    4 PHAHFGFASAYDSVRESIFRVLGAIIPPDEEGFEVFLTGHSLGGALATLCAVDVRTRMPHVSVTMYNFGSPKVGDEAFVLRYNSLVKNSFRVVNDADVFARLPRNKGIGSVPGLPYYYHVGRTVLTST-ERP-----------KAWVEGESAGEDPLKDRWGDISELLDA--------EVSLMQTVLDGRGWKSHVENGYHAAM 187
[Close]
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A7S0TMB5_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TMB5_HEMAN)

HSP 1 Score: 118 bits (296), Expect = 1.090e-26
Identity = 74/204 (36.27%), Postives = 105/204 (51.47%), Query Frame = 3 
Query: 1176 PRVHAGFRGAMCGIQETTAAAVMFATGGVPEGWHIYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLE----YSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKD--IDTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSYYAAL 1769
            P  H GF  A   ++E+    +        + + +++TGHSLGGALATLCAVD   R     +TMYNFGSP+VG+ +F   YNE    +FR+VND D+ ARLP  + +  +     + HVGRTVL               +    W+EGE +G  PLKD   D  E+           E+  +Q L+ G     H+E+ Y+AA+
Sbjct:    8 PHAHFGFASAYYSVRESIFRVLTSLIPPHEDDYEVFLTGHSLGGALATLCAVDVRVRMPHVGVTMYNFGSPKVGDESFVLRYNEIVPNSFRVVNDADVFARLPRNRGLGSVPGLPYFYHVGRTVLTS------------TEKPSAWIEGESAGEDPLKDRWADLSELLDA--------EVSLMQKLLDGRGWKEHVENGYHAAM 191
[Close]
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A7J7IL64_9RHOD (Lipase_3 domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IL64_9RHOD)

HSP 1 Score: 126 bits (317), Expect = 4.180e-26
Identity = 87/219 (39.73%), Postives = 117/219 (53.42%), Query Frame = 3 
Query: 1170 ETPRVHAGFRGAMCGIQETTAAAVMFATGGVPE-------GWHIYVTGHSLGGALATLCAVDFADRF------------KASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLEYSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDIDTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSYYAAL 1769
            E  RVHAGF  A   I++T     +       E       G  ++ TGHSLG ALATL A+D                 K  ++ MYNFGSPRVGN+ FAR +NE    A+R+VND D++ARLP  + +SF +Y H+G TVLV        ADGK      LW+EG+ SG  PLK     E + + +D  IR E    +++    ++ HHLED+Y+ AL
Sbjct:  623 EGARVHAGFAEAFRSIRDTVRRVALHFVEKCREEGTLSMEGLELFFTGHSLGAALATLAALDITRVLEERGIRTSQGTGKGVRIRMYNFGSPRVGNAVFARTFNELVPDAYRVVNDADVVARLP--RTLSF-DYHHIGSTVLVN-------ADGK------LWIEGQSSGKDPLK-----ERWSSLED-LIRLEQRAFESIFNNEALLHHLEDAYFVAL 819
[Close]
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A7S0UFC6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UFC6_HEMAN)

HSP 1 Score: 109 bits (272), Expect = 1.020e-24
Identity = 51/95 (53.68%), Postives = 68/95 (71.58%), Query Frame = 3 
Query: 1257 GVPEGWHIYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLEYSHVGRTVLV 1541
            G  EGW IYVTGHSLGGAL+T+CA D A+++   K+  YN+GSPRVGN+ F + +N+    AFR+VND D++AR+P  +     +Y HVGRT LV
Sbjct:    1 GPEEGWTIYVTGHSLGGALSTICAADMAEKYPGCKVVNYNYGSPRVGNAPFVQGFNQAVPEAFRVVNDADVVARVPRSRGF---DYYHVGRTALV 92
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT38_9PHAE1.180e-4044.34C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A7S0LWE7_9CRYP3.500e-3650.00Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
D8LR60_ECTSI1.910e-3543.45Lipase domain protein, partial n=1 Tax=Ectocarpus ... [more]
L1J5S5_GUITC4.080e-3529.21Lipase n=1 Tax=Guillardia theta (strain CCMP2712) ... [more]
A0A7S1H6Z8_HEMAN1.310e-3444.83Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A0G4EHV0_VITBC7.650e-3241.33C2 domain-containing protein n=4 Tax=Vitrella bras... [more]
A0A7S0YX09_9CRYP1.070e-2839.71Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S0TMB5_HEMAN1.090e-2636.27Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]
A0A7J7IL64_9RHOD4.180e-2639.73Lipase_3 domain-containing protein n=1 Tax=Cyanidi... [more]
A0A7S0UFC6_HEMAN1.020e-2453.68Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_988contigC-australica_Contig_988:846..5398 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog55529.EKX43883
PFAMsC2,Lipase_3
Model size2702
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons18
Evalue3.63e-38
EggNOG OGsKOG4569@1|root,KOG4569@2759|Eukaryota
Descriptionphospholipase A1 activity
Cds size1341
COG categoryG
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_988.1.1prot_C-australica_Contig_988.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_988 1832..4442 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588854.2122965-UTR-C-australica_Contig_988:845..10851682588854.2122965-UTR-C-australica_Contig_988:845..1085Chrysoparadoxa australica CS_1217UTRC-australica_Contig_988 846..1085 +
1682588854.2214103-UTR-C-australica_Contig_988:1247..13521682588854.2214103-UTR-C-australica_Contig_988:1247..1352Chrysoparadoxa australica CS_1217UTRC-australica_Contig_988 1248..1352 +
1682588854.229274-UTR-C-australica_Contig_988:1437..15381682588854.229274-UTR-C-australica_Contig_988:1437..1538Chrysoparadoxa australica CS_1217UTRC-australica_Contig_988 1438..1538 +
1682588854.2376878-UTR-C-australica_Contig_988:1801..18311682588854.2376878-UTR-C-australica_Contig_988:1801..1831Chrysoparadoxa australica CS_1217UTRC-australica_Contig_988 1802..1831 +
1682588854.391447-UTR-C-australica_Contig_988:4442..52601682588854.391447-UTR-C-australica_Contig_988:4442..5260Chrysoparadoxa australica CS_1217UTRC-australica_Contig_988 4443..5260 +
1682588854.4011304-UTR-C-australica_Contig_988:5331..53981682588854.4011304-UTR-C-australica_Contig_988:5331..5398Chrysoparadoxa australica CS_1217UTRC-australica_Contig_988 5332..5398 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588854.2455997-CDS-C-australica_Contig_988:1831..18481682588854.2455997-CDS-C-australica_Contig_988:1831..1848Chrysoparadoxa australica CS_1217CDSC-australica_Contig_988 1832..1848 +
1682588854.2533207-CDS-C-australica_Contig_988:1978..21561682588854.2533207-CDS-C-australica_Contig_988:1978..2156Chrysoparadoxa australica CS_1217CDSC-australica_Contig_988 1979..2156 +
1682588854.2667193-CDS-C-australica_Contig_988:2383..24881682588854.2667193-CDS-C-australica_Contig_988:2383..2488Chrysoparadoxa australica CS_1217CDSC-australica_Contig_988 2384..2488 +
1682588854.2748418-CDS-C-australica_Contig_988:2575..27351682588854.2748418-CDS-C-australica_Contig_988:2575..2735Chrysoparadoxa australica CS_1217CDSC-australica_Contig_988 2576..2735 +
1682588854.2833188-CDS-C-australica_Contig_988:2839..29611682588854.2833188-CDS-C-australica_Contig_988:2839..2961Chrysoparadoxa australica CS_1217CDSC-australica_Contig_988 2840..2961 +
1682588854.2930994-CDS-C-australica_Contig_988:3062..31311682588854.2930994-CDS-C-australica_Contig_988:3062..3131Chrysoparadoxa australica CS_1217CDSC-australica_Contig_988 3063..3131 +
1682588854.3026304-CDS-C-australica_Contig_988:3225..32891682588854.3026304-CDS-C-australica_Contig_988:3225..3289Chrysoparadoxa australica CS_1217CDSC-australica_Contig_988 3226..3289 +
1682588854.3138053-CDS-C-australica_Contig_988:3365..34761682588854.3138053-CDS-C-australica_Contig_988:3365..3476Chrysoparadoxa australica CS_1217CDSC-australica_Contig_988 3366..3476 +
1682588854.333536-CDS-C-australica_Contig_988:3536..35771682588854.333536-CDS-C-australica_Contig_988:3536..3577Chrysoparadoxa australica CS_1217CDSC-australica_Contig_988 3537..3577 +
1682588854.3458247-CDS-C-australica_Contig_988:3654..37581682588854.3458247-CDS-C-australica_Contig_988:3654..3758Chrysoparadoxa australica CS_1217CDSC-australica_Contig_988 3655..3758 +
1682588854.354278-CDS-C-australica_Contig_988:3823..38961682588854.354278-CDS-C-australica_Contig_988:3823..3896Chrysoparadoxa australica CS_1217CDSC-australica_Contig_988 3824..3896 +
1682588854.3633616-CDS-C-australica_Contig_988:3988..40881682588854.3633616-CDS-C-australica_Contig_988:3988..4088Chrysoparadoxa australica CS_1217CDSC-australica_Contig_988 3989..4088 +
1682588854.372757-CDS-C-australica_Contig_988:4173..42221682588854.372757-CDS-C-australica_Contig_988:4173..4222Chrysoparadoxa australica CS_1217CDSC-australica_Contig_988 4174..4222 +
1682588854.3822532-CDS-C-australica_Contig_988:4294..44421682588854.3822532-CDS-C-australica_Contig_988:4294..4442Chrysoparadoxa australica CS_1217CDSC-australica_Contig_988 4295..4442 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_988.1.1

>prot_C-australica_Contig_988.1.1 ID=prot_C-australica_Contig_988.1.1|Name=mRNA_C-australica_Contig_988.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=447bp
MDINWGSSYALSTSPKLDPSKFTTIAFIDNRSSDTQCLMWRDKANKRLIA
SFRGTESVKDMITDLYGIQEPYDSKQSQLERSYSNMVAQFDEELKKGRNE
GLAWLRELWKQRPGSGRKDIKRLGSGATGEGKACEESRLEEVKEAALAVS
TKEGRSVIESWYDEALVALSDPGKHVPPLPKISSLRGFDMKGAEAKGKSL
IGKVRNSFSATRKWIARDLKEEAAAKKKTYDETPRVHAGFRGAMCGIQET
TAAAVMFATGGVPEGWHIYVTGHSLGGALATLCAVDFADRFKASKLTMYN
FGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLEYSHVG
RTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDIDTLEVFKTRDD
KAIRNELDKLQALVMGNSIAHHLEDSYYAALVPALKLQVVGKEKQP*
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mRNA from alignment at C-australica_Contig_988:846..5398+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_988.1.1 ID=mRNA_C-australica_Contig_988.1.1|Name=mRNA_C-australica_Contig_988.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4553bp|location=Sequence derived from alignment at C-australica_Contig_988:846..5398+ (Chrysoparadoxa australica CS_1217)
TATATGGGGAGAAACGGTCAGCTTGGATGTACAAGATATTGCTACTACTA
AACTGTTTTTAAGTGTAAGTTGAGGCTTAACTCAGTCACTTGCGGCACTA
CGTCAGCTTCAGCAGCTGGTTAGGTTGGCCCACACTTTTCTCTTCTCAGC
TAAAAGATCAGGATCAACCTGGTGTCATAGCTAGTGCCCAAGTGAACATT
GGCGACTATGTAAATATAAAATCTGCTTCTATACCTCAAGGTATTGCTTC
CCCTCATCGCTAACCTACGCAACATAAAGTAAATGGCCATATTTCTTGGT
TCTGTGAAGACAAAATGTGATTACATGGCAATGAACCAAAGTGGAGCTTG
TAACATGACACAACCTGGCGCGCCTTACTTCCTTCCTTCCTTCTTTTTTT
AGCCTTGAGCACTCTTTGTGGCAATCACGATAAAGCACCTGGTGACAAGT
GGGTTGGATGGATCAGTCTTGAACCTCAGCTAACATTAACTCAGGATCCA
CCAAAAGGTAAAAGAGGCCCATGAATATGCCCGATAGCTCACCACTACTT
CTCTTACGCCTTACTTCTCTGACTCAATAATAATATCAACAGGGATTCTG
CCAGCTAGTCTAGAGGCTACAGTTCAAGTTGAAGTTAGGTTTATAGATAT
CCAAGAAATCACCGATGTGGCTCCGCCGAAACCTGACTATACGGTAACAA
CTTTGGCACGCTCCGTTGGTATAGCTCCTTTTCCTGAAGCCAGTCATGTT
GGCTGTGAGTAGTAGGTCCTTGTGAGGCAAAGCGCGTGAAAGTCTTAGTC
ATATCTGATGTCCCCCCCTCTCTTTCTTCCTTTTTAACACTCCCTCTCAT
GCCTCATAGACACTCGACCCATTTACTCATTCTTGTTCTAATTACTAATG
CATTTGGTCCCTTATTGTACTGACTAGTTAGTGCCTTGGCCTTGCCTATC
ACCCAGGAGGTTGGTGGTCCATCAGGAGGGAAAGGAATGGATATCAACTG
GGGGTAGGTCATAGCTATCATTTTATTTATACTATATGTCATTTTTTATT
TATATCCAACCCAACCAAGCTTCAGCTCTCGTTTATGCTTACCCTCACCT
TTTACTACCCACATTCCGCTGTTGTATTTTCAGGTCCAGCTATGCCCTCT
CAACTTCTCCTAAACTTGATCCTTCAAAGTTTACCACCATTGCTTTTATT
GACAACCGGAGCTCTGACACGCAATGCCTGATGTGGAGAGACAAAGCCAA
TAAGAGGTTGATTGCCAGCTTCCGGGGCACAGAGAGTGTGAAAGATATGA
TAACCGACCTGGTGAGTAGCTGTTGCAGGTGTTATAGCTGTTGGAATTCC
ATGACGGAATCGTCTCATGGGTGAAAGTGATTGATTGCAAGTTAGGGGTG
GTGAAGGCAATTATTAGTGCTGGATGACGGCAGGTTGCAACCTAATTCCA
TAATGTAGGCAGTAATTTATGCGTTGTCAATATTTAGAGGGTTCTCTAAT
CGCTGTTAATTGCAACTCTTTGGACCTTCCCCTGTCAGTATGGCATCCAA
GAACCATATGACTCGAAACAATCGCAGTTGGAGCGTAGCTACTCTAATAT
GGTGGCTCAATTTGATGAGGAGCTCAAGAAGGGCCGGAATGAGGTAGCTC
AGTTTGCCTTCTATTCTGTGGGCTGCTGCATTTGTACACTCAATGTCTCA
ATGATATCTCAATGATGTCTCACTACACAGGGTCTGGCTTGGCTTAGGGA
GCTGTGGAAGCAGAGACCAGGAAGTGGTAGGAAAGATATCAAACGGCTTG
GTTCGGGCGCTACAGGTGAAGGGAAGGCATGTGAGGAGAGCAGGTTGGAG
GAAGTGAAAGAAGCAGCTTTAGCTGTCAGCACCAAAGAAGGTACAATATC
ATGACATGCAATTGTCCTCTCCTACTGCTGGCCTACTACTGGTGACTTAA
TCTTGCTTGCTCAACTGTTAATCGTTATTGACGGCTCTAAACAGGCCGCT
CCGTGATTGAGTCTTGGTATGATGAAGCCCTAGTTGCGTTGAGTGATCCC
GGCAAGCACGTCCCACCGTTACCAAAGATCAGCAGCCTGAGAGGCTTTGA
TATGAAGGGAGCTGAGGTGGTGTTAACAGACAGCTATCCTCTTGTGCCCC
TTTCTTGTTTGAATTATTACACTAATCACACTATTTAGAGCACTAAGGGA
CTTGTGTGATGCCTCAGGCTAAGGGAAAATCACTGATAGGCAAAGTCCGC
AACTCGTTTAGTGCTACCAGAAAATGGATCGCTAGGGTAAGTGCATGGGA
TAAGAGGATCACCAATAGCTTCCAATAGCTTGCCTAACTGTAACATCCCT
GACTATATCTGATACGATATGACATGGCAGGATTTAAAGGAAGAGGCTGC
AGCCAAGAAGAAAACTTATGATGAAACACCTAGGGTTCATGCAGGTAAAG
GTAGCAAGTGATCACAGATGAGACGCGGAGCCGTTTCTTATTTCTTCTTC
CAACGGCAACTAAATCCCAGGGTTTCGTGGTGCAATGTGTGGCATTCAAG
AGACAACCGCAGCAGCTGTTATGTTTGCTACCGGTGGGGTCCCAGAAGGC
TGGCATATTTATGTCACAGGACACTCTCTAGGTAATGTGTGTTTGACGTC
AATGCTGGATTAAAAAAAACCTTGACCTTGAAGTCTTTTAGGTGGGGCTC
TTGCAACGCTTTGCGCAGTGGACTTTGCAGATGTGAGTTAGAATAGCCCT
CATAATGTTGCCAAGGGACCCAAGCTCTCACTCATCAAAGCTCTCTCACA
TCTTTCCAGCGGTTCAAGGCCTCCAAGCTTACCATGTACAATTTTGGCAG
TCCACGAGTGGGCAACAGTGCTTTTGCCCGGTTGTATAACGAAAAGCATG
CTGGTGCATTCAGGTGCCCTCGCCCTAGCAATTTTTTTAATCCTTAATCT
TCACACCTTCACCTTCACCTGCCATCAGAATTGTAAATGATATGGATATG
ATTGCGAGACTCCCGCCAGAGCAGCCCATAAGTTTCTTAGAATATTCCCA
TGTGAGTTATCGGCCAAGTCTTTGGTTTTGGCTTTGGCTTGAAGCCGTTA
CCTTTTACTATCCTAAATTGCACTTTTACATGATATATTAAAGGTGGGCC
GCACCGTCCTAGTAAAAGAAGGGGAGAGAGAAGGAAAGGCTGATGGGAAG
AAGGACAAAGTGTTCAAGTTGTGGGTTGAAGGAGAGGACTCAGGTCTACT
CACAAGTGATATATTTGCCTGCGTCCAAGTGAGTTACTTCTGGTTCCATA
ATGGTTAATTCATCTCTCCTCACTCCAGGGACTTGCCCATTGAAGGATAT
AGACACTCTGGAGGTTTTCAAGACCAGGTGAGTATGCCATTATATGACAA
GGTGTTGCCATATATGCAAATCTGACCTTCCCGACTTTACTTCCCGCAGG
GACGATAAGGCTATCCGCAATGAGCTTGACAAGCTTCAAGCTCTGGTAAT
GGGGAACAGTATAGCACATCACTTGGAGGACTCTTACTATGCAGCGTTAG
TCCCAGCCTTGAAGTTGCAAGTGGTGGGCAAGGAGAAGCAACCTTAGAGA
AAAGAAAGGGGAAACAGAAAGAGCCTCTGTATTTATCGAATGGCTGAGGA
ATTTTAAAAAATTACAAAAGTACTCCACCCTCCGCCTGTTCCCCTGCTTT
GGTCTCTGCTACCCCACCACCACCACCACCACTACCAACGTTTTCCTCCT
CGTGTAATGGGGCTCCTCCAAGGTAAGCCTCAGGTTCACAGAGAATCAGA
TACTGAGACATGCTTTGACATGCTCTGGTGCAAAATAGGAGATTGGTGAC
CCTTCCCAATGATGAGCAATGTTCCGACTTGTTATGCCATGCACAGGAGA
CCTTTGTTGCTGTTATATTCGGGCTGCAATAGTTGGCTAATCCGGTGAAC
GGGTGAGCAAAACAAAACAAAAGCAAAAGTAACACCCTGCTCTGTCTCTC
AGGAAGGAAGTGAATGCTTCAAAGCAGCTAGGATAACGGATCAAACAGCT
TAAATAACTATAAAAAATATGTAACAAAAATCCTACCTCCTGGCCTGAGC
CCACATCAGAAAGGCTAGGAGGTAGTACCCTTGCTCTCTCCCTTCCTTTT
CTTTTTCATATCTTCCATCCTCTTCATCTTCGTCTCAAGAGCAACCTTGT
TCTCCTCCAGTGCCTGAACATACTCAGGATCTGGCTCCTCCCCTGCCGGT
GTGCCTGTCAGAGTGAAAGAACCAAAGTCAGTAATTTGGTCAAGTTTAGG
CGAATCCGGTTTCCATTTCCTTCAATTATCGACTCCAGTTGTAAGTTAGA
TTCAACCAAGCGCCTTATGCTGTTCTGAAGCTCATGCAGGTCGGCTTCAA
GCACCAGCAGCTGGTCTGCAACGGGGTGGTTGGGGTGATGATTAGCAGAG
TGATGATTAGCAGGTGGGAAGAGCATGTCACTCTACCTGCCATCACAAAT
CACTCCCCTCCTCTTGGCCTTCGAGTACTTAACGGTGAGCTTCAAGTTCA
AGC
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Coding sequence (CDS) from alignment at C-australica_Contig_988:846..5398+

>mRNA_C-australica_Contig_988.1.1 ID=mRNA_C-australica_Contig_988.1.1|Name=mRNA_C-australica_Contig_988.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1341bp|location=Sequence derived from alignment at C-australica_Contig_988:846..5398+ (Chrysoparadoxa australica CS_1217)
ATGGATATCAACTGGGGGTCCAGCTATGCCCTCTCAACTTCTCCTAAACT
TGATCCTTCAAAGTTTACCACCATTGCTTTTATTGACAACCGGAGCTCTG
ACACGCAATGCCTGATGTGGAGAGACAAAGCCAATAAGAGGTTGATTGCC
AGCTTCCGGGGCACAGAGAGTGTGAAAGATATGATAACCGACCTGTATGG
CATCCAAGAACCATATGACTCGAAACAATCGCAGTTGGAGCGTAGCTACT
CTAATATGGTGGCTCAATTTGATGAGGAGCTCAAGAAGGGCCGGAATGAG
GGTCTGGCTTGGCTTAGGGAGCTGTGGAAGCAGAGACCAGGAAGTGGTAG
GAAAGATATCAAACGGCTTGGTTCGGGCGCTACAGGTGAAGGGAAGGCAT
GTGAGGAGAGCAGGTTGGAGGAAGTGAAAGAAGCAGCTTTAGCTGTCAGC
ACCAAAGAAGGCCGCTCCGTGATTGAGTCTTGGTATGATGAAGCCCTAGT
TGCGTTGAGTGATCCCGGCAAGCACGTCCCACCGTTACCAAAGATCAGCA
GCCTGAGAGGCTTTGATATGAAGGGAGCTGAGGCTAAGGGAAAATCACTG
ATAGGCAAAGTCCGCAACTCGTTTAGTGCTACCAGAAAATGGATCGCTAG
GGATTTAAAGGAAGAGGCTGCAGCCAAGAAGAAAACTTATGATGAAACAC
CTAGGGTTCATGCAGGGTTTCGTGGTGCAATGTGTGGCATTCAAGAGACA
ACCGCAGCAGCTGTTATGTTTGCTACCGGTGGGGTCCCAGAAGGCTGGCA
TATTTATGTCACAGGACACTCTCTAGGTGGGGCTCTTGCAACGCTTTGCG
CAGTGGACTTTGCAGATCGGTTCAAGGCCTCCAAGCTTACCATGTACAAT
TTTGGCAGTCCACGAGTGGGCAACAGTGCTTTTGCCCGGTTGTATAACGA
AAAGCATGCTGGTGCATTCAGAATTGTAAATGATATGGATATGATTGCGA
GACTCCCGCCAGAGCAGCCCATAAGTTTCTTAGAATATTCCCATGTGGGC
CGCACCGTCCTAGTAAAAGAAGGGGAGAGAGAAGGAAAGGCTGATGGGAA
GAAGGACAAAGTGTTCAAGTTGTGGGTTGAAGGAGAGGACTCAGGGACTT
GCCCATTGAAGGATATAGACACTCTGGAGGTTTTCAAGACCAGGGACGAT
AAGGCTATCCGCAATGAGCTTGACAAGCTTCAAGCTCTGGTAATGGGGAA
CAGTATAGCACATCACTTGGAGGACTCTTACTATGCAGCGTTAGTCCCAG
CCTTGAAGTTGCAAGTGGTGGGCAAGGAGAAGCAACCTTAG
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