mRNA_C-australica_Contig_988.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A6H5KT38_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT38_9PHAE) HSP 1 Score: 173 bits (439), Expect = 1.180e-40 Identity = 94/212 (44.34%), Postives = 128/212 (60.38%), Query Frame = 3 Query: 1137 EEAAAKKKTYDETPRVHAGFRGAMCGIQETTAAAVMFATGGVPEGWHIYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISF-LEYSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDIDTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSYYAAL 1769
EEAAA K + PR+HAGFR A + T +A + A G PE WH+Y+TGHSLGGALATL +D R+ +K+TMYNFGSPRVGN AFA LY+ +FR+VN++D++AR+P L+Y H GRTV+V E E W++GE G CPL++ D + + E+D ++AL+ G I HH+E +Y+AAL
Sbjct: 936 EEAAAAK----DPPRIHAGFRRAYVSVNGTLSAVLGSAMEGKPEDWHVYITGHSLGGALATLATLDHCRRYPEAKVTMYNFGSPRVGNKAFAELYDSFVGDSFRVVNNLDIVARMPRATMGGISLDYQHCGRTVMVAEDPEEPP-----------WIQGESGGECPLEETDPVMLLTQGKTDFFSAEIDFMKALLSGKGIDHHMEYNYFAAL 1132
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A7S0LWE7_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LWE7_9CRYP) HSP 1 Score: 144 bits (362), Expect = 3.500e-36 Identity = 84/168 (50.00%), Postives = 107/168 (63.69%), Query Frame = 3 Query: 1278 IYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLEYSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDIDTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSYYAALVPAL 1781
+ VTGHSLG ALATLCA D A F +++TMYN+GSPRVGN AFARL++ AFRIVND D++AR+P + L Y HVGRTVLV ++GK ++WVEGE G+ PLK+ T + + EL +Q LV G SIA H+ED+Y+ ALV AL
Sbjct: 2 VLVTGHSLGAALATLCAADIAPLFPGARVTMYNYGSPRVGNRAFARLFDTLVPDAFRIVNDADLVARVPRTR---LLNYRHVGRTVLV--SAQQGK---------RIWVEGESEGSDPLKE------RWTELSELLEAELSLMQGLVGGGSIADHMEDAYFRALVQAL 149
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: D8LR60_ECTSI (Lipase domain protein, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR60_ECTSI) HSP 1 Score: 143 bits (361), Expect = 1.910e-35 Identity = 73/168 (43.45%), Postives = 102/168 (60.71%), Query Frame = 3 Query: 1257 GVPEGWHIYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISF-LEYSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDIDTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSY 1757
G PE WH+Y+TGHSLGGALATL +D R+ +K+TMYNFGSPRVGN AFA LY+ +FR+VN++D++AR+P L+Y H GRTV+V E E W++GE G CPL++ D + + + E+D ++AL G I HH+E ++
Sbjct: 3 GKPEDWHVYITGHSLGGALATLATLDHRRRYPEAKVTMYNFGSPRVGNKAFAELYDSFVGDSFRVVNNLDVVARMPRATMGGISLDYQHSGRTVMVAEDPEEPP-----------WIQGESGGECPLEETDPVMLLTQGNTDFFSAEIDFMKALFSGKGIDHHMEHNW 159
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: L1J5S5_GUITC (Lipase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J5S5_GUITC) HSP 1 Score: 155 bits (392), Expect = 4.080e-35 Identity = 130/445 (29.21%), Postives = 197/445 (44.27%), Query Frame = 3 Query: 549 IAFIDNRSSDTQCLMWRDKANKRLIASFRGTESV--KDMITDLYGIQEPYDSKQSQ---------LERSYSNMVAQFDEELKKGRNE------------GLAWLRELWKQ-RPGSGRKDIK--RLGSGATGEGKACEESRLEEVKEAALAVSTKEGRSVIESWYDEALVALSDPGKHVPPLPKISSLRGFDMKGAEAKGKSLIGKVRNSFSATRKWIARDLKEEAAAKKKTYDETPRVHAGFRGAMCGIQETTAAA--VMFATGGVPEG-WHIYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLEYSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDIDTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSYYAALVPALKLQVV 1796
+ FIDN+ +DTQ +WRD+ KR++ +FRGTE KD +TD Q+ +D L + +++ + + +++GR E L L + KQ + +G D K + A E E + E+ E+ L ++ K K +G M G + ++ T +E P VH GF ++ V+ + G G W I+VTGHSLGGAL+TLCA D A F S + MYNFGSPRVGN F +++N+ AFR+VND D++AR+P + + Y HVGRT LV +WVEGE +G+ PLK+ T + + E+ LQ +V GNS+ H+ED+Y+ +L AL+ + +
Sbjct: 493 LCFIDNQETDTQVTLWRDQKGKRVVLAFRGTEQTRWKDFLTDALITQQRFDPGSDPEEDIELPPLLASATASVAKKAEGTIEEGRGELIAVGSLGMLSQNLLSLESISKQVQQLTGSDDYKFGEMSRRALREVTGKEFKDMSEMAESTLNMAQKXXXXXXXXXXXXXXXXXXTLWKKAEGXXXXXITKGI-MDGISSXXXXXXXXXXXXXXXX-------TGQQNLPSSDTEEELPAVHVGFLRGYSSVRRRILQVLQVLLESEGAGGGEWKIFVTGHSLGGALSTLCAADVAALFPQSAVVMYNFGSPRVGNLKFVQMFNQLVPEAFRVVNDADVVARVPRSR---LMNYHHVGRTALVSSSSS-------------VWVEGESAGSDPLKE------RWTELSQLVDAEISLLQGIVNGNSLEDHMEDAYFLSLTRALEARAL 907
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A7S1H6Z8_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H6Z8_HEMAN) HSP 1 Score: 140 bits (352), Expect = 1.310e-34 Identity = 78/174 (44.83%), Postives = 104/174 (59.77%), Query Frame = 3 Query: 1269 GWHIYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLEYSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDIDTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSYYAALVPALKLQ 1790
GW IYVTGHSLGGAL+T+CA D A+++ K+ YN+GSPRVGN+ F + +N+ AFR+VND D++AR+P + +Y HVGRT LV G+ LWVEGE GT PL+D + + + E+ LQ LV G S+ H+ED+YY AL AL Q
Sbjct: 1 GWTIYVTGHSLGGALSTICAADMAEKYPGCKVVNYNYGSPRVGNAPFVQGFNQAVPEAFRVVNDADVVARVPRSRGF---DYYHVGRTALVSRSGGGGRGS--------LWVEGESEGTDPLRD------RWSNLSELLDAEVAFLQGLVKGESLGDHMEDAYYEALQQALSAQ 157
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A0G4EHV0_VITBC (C2 domain-containing protein n=4 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EHV0_VITBC) HSP 1 Score: 145 bits (366), Expect = 7.650e-32 Identity = 93/225 (41.33%), Postives = 118/225 (52.44%), Query Frame = 3 Query: 1176 PRVHAGFRGAMCGIQETTAAAVMFATGGVPEGWHIYVTGHSLGGALATLCAVDFADRFKAS---------KLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLEYSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPL-------KDIDTLEVFKTRD-------DKAIRNELDKLQALVMGNSIAHHLEDSYYAALVPAL 1781
PRVHAGF A I+ + ATGG W + VTGHSLGGALATLCA D A S K+ +YN+G+PRVGN AF +N K AFR+VN D+IARLP L+Y HVGRTVLV E G+ + LW+EGE G PL KD + VF R ++ I E+ L + G +++HH ED Y+AA+ A+
Sbjct: 836 PRVHAGFHQAYLSIRSRLHELIHEATGGQAGEWEVLVTGHSLGGALATLCAYDMATHGPVSRGEARGPPGKVLLYNYGAPRVGNGAFVEKFNAKIGDAFRVVNSRDVIARLPRGATAWILDYEHVGRTVLVDEA---GQTN--------LWIEGETEGPNPLQEANPWGKDENGTLVFLGRSVELPRLTEEFIDREVAMLNTITNGEALSHHFEDQYHAAMTVAV 1049
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A7S0YX09_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YX09_9CRYP) HSP 1 Score: 124 bits (311), Expect = 1.070e-28 Identity = 81/204 (39.71%), Postives = 107/204 (52.45%), Query Frame = 3 Query: 1176 PRVHAGFRGAMCGIQETTAAAVMFATGGVPEGWHIYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLE----YSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDI--DTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSYYAAL 1769
P H GF A ++E+ + EG+ +++TGHSLGGALATLCAVD R +TMYNFGSP+VG+ AF YN +FR+VND D+ ARLP + I + Y HVGRTVL ER K WVEGE +G PLKD D E+ E+ +Q ++ G H+E+ Y+AA+
Sbjct: 4 PHAHFGFASAYDSVRESIFRVLGAIIPPDEEGFEVFLTGHSLGGALATLCAVDVRTRMPHVSVTMYNFGSPKVGDEAFVLRYNSLVKNSFRVVNDADVFARLPRNKGIGSVPGLPYYYHVGRTVLTST-ERP-----------KAWVEGESAGEDPLKDRWGDISELLDA--------EVSLMQTVLDGRGWKSHVENGYHAAM 187
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A7S0TMB5_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TMB5_HEMAN) HSP 1 Score: 118 bits (296), Expect = 1.090e-26 Identity = 74/204 (36.27%), Postives = 105/204 (51.47%), Query Frame = 3 Query: 1176 PRVHAGFRGAMCGIQETTAAAVMFATGGVPEGWHIYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLE----YSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKD--IDTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSYYAAL 1769
P H GF A ++E+ + + + +++TGHSLGGALATLCAVD R +TMYNFGSP+VG+ +F YNE +FR+VND D+ ARLP + + + + HVGRTVL + W+EGE +G PLKD D E+ E+ +Q L+ G H+E+ Y+AA+
Sbjct: 8 PHAHFGFASAYYSVRESIFRVLTSLIPPHEDDYEVFLTGHSLGGALATLCAVDVRVRMPHVGVTMYNFGSPKVGDESFVLRYNEIVPNSFRVVNDADVFARLPRNRGLGSVPGLPYFYHVGRTVLTS------------TEKPSAWIEGESAGEDPLKDRWADLSELLDA--------EVSLMQKLLDGRGWKEHVENGYHAAM 191
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A7J7IL64_9RHOD (Lipase_3 domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IL64_9RHOD) HSP 1 Score: 126 bits (317), Expect = 4.180e-26 Identity = 87/219 (39.73%), Postives = 117/219 (53.42%), Query Frame = 3 Query: 1170 ETPRVHAGFRGAMCGIQETTAAAVMFATGGVPE-------GWHIYVTGHSLGGALATLCAVDFADRF------------KASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLEYSHVGRTVLVKEGEREGKADGKKDKVFKLWVEGEDSGTCPLKDIDTLEVFKTRDDKAIRNELDKLQALVMGNSIAHHLEDSYYAAL 1769
E RVHAGF A I++T + E G ++ TGHSLG ALATL A+D K ++ MYNFGSPRVGN+ FAR +NE A+R+VND D++ARLP + +SF +Y H+G TVLV ADGK LW+EG+ SG PLK E + + +D IR E +++ ++ HHLED+Y+ AL
Sbjct: 623 EGARVHAGFAEAFRSIRDTVRRVALHFVEKCREEGTLSMEGLELFFTGHSLGAALATLAALDITRVLEERGIRTSQGTGKGVRIRMYNFGSPRVGNAVFARTFNELVPDAYRVVNDADVVARLP--RTLSF-DYHHIGSTVLVN-------ADGK------LWIEGQSSGKDPLK-----ERWSSLED-LIRLEQRAFESIFNNEALLHHLEDAYFVAL 819
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Match: A0A7S0UFC6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UFC6_HEMAN) HSP 1 Score: 109 bits (272), Expect = 1.020e-24 Identity = 51/95 (53.68%), Postives = 68/95 (71.58%), Query Frame = 3 Query: 1257 GVPEGWHIYVTGHSLGGALATLCAVDFADRFKASKLTMYNFGSPRVGNSAFARLYNEKHAGAFRIVNDMDMIARLPPEQPISFLEYSHVGRTVLV 1541
G EGW IYVTGHSLGGAL+T+CA D A+++ K+ YN+GSPRVGN+ F + +N+ AFR+VND D++AR+P + +Y HVGRT LV
Sbjct: 1 GPEEGWTIYVTGHSLGGALSTICAADMAEKYPGCKVVNYNYGSPRVGNAPFVQGFNQAVPEAFRVVNDADVVARVPRSRGF---DYYHVGRTALV 92 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_988.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_988.1.1 >prot_C-australica_Contig_988.1.1 ID=prot_C-australica_Contig_988.1.1|Name=mRNA_C-australica_Contig_988.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=447bp MDINWGSSYALSTSPKLDPSKFTTIAFIDNRSSDTQCLMWRDKANKRLIAback to top mRNA from alignment at C-australica_Contig_988:846..5398+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_988.1.1 ID=mRNA_C-australica_Contig_988.1.1|Name=mRNA_C-australica_Contig_988.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4553bp|location=Sequence derived from alignment at C-australica_Contig_988:846..5398+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_988:846..5398+ >mRNA_C-australica_Contig_988.1.1 ID=mRNA_C-australica_Contig_988.1.1|Name=mRNA_C-australica_Contig_988.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1341bp|location=Sequence derived from alignment at C-australica_Contig_988:846..5398+ (Chrysoparadoxa australica CS_1217)back to top |