Homology
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match:
A0A2D6TWY9_9PROT (CopG family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D6TWY9_9PROT)
HSP 1 Score: 107 bits (266), Expect = 7.320e-29
Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLK 216
MKA DLDKKFD KED+LD FD +ATR N E KRVNVDFP WMV+SL++E+ RLG+TRQSLIK+W+ADRL+
Sbjct: 1 MKAHDLDKKFDNNKEDVLDHFDLDTATRPNREAKRVNVDFPSWMVESLDKEAQRLGVTRQSLIKLWLADRLE 72
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match:
UPI001BC0EF17 (Antitoxin n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=UPI001BC0EF17)
HSP 1 Score: 105 bits (262), Expect = 2.820e-28
Identity = 49/75 (65.33%), Postives = 64/75 (85.33%), Query Frame = 1
Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLKVLG 225
MKA++LDKKFD G ED++D FD +A R N EQKRVNVDFP WMV+SL++E++RLG+TRQS+IK+WIA+RL+ G
Sbjct: 1 MKASELDKKFDEGVEDVIDEFDLSTAMRPNREQKRVNVDFPLWMVESLDREASRLGVTRQSIIKVWIAERLEKAG 75
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match:
A0A0M2VHV5_9GAMM (CopG family transcriptional regulator n=1 Tax=Arsukibacterium sp. MJ3 TaxID=1632859 RepID=A0A0M2VHV5_9GAMM)
HSP 1 Score: 103 bits (256), Expect = 3.340e-27
Identity = 43/72 (59.72%), Postives = 65/72 (90.28%), Query Frame = 1
Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLK 216
MKA++LD+KFD ++D+L+ FD +ATRINH+QKR+NVDFP+W+V SL++E++R+G+TRQS+IKMW+ +RL+
Sbjct: 1 MKASELDRKFDENQQDVLEHFDLSTATRINHKQKRINVDFPEWVVSSLDREASRIGVTRQSIIKMWLVERLE 72
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match:
A0A2N3G9C1_9ACTN (CopG family transcriptional regulator n=1 Tax=Actinobacteria bacterium HGW-Actinobacteria-10 TaxID=2013645 RepID=A0A2N3G9C1_9ACTN)
HSP 1 Score: 102 bits (253), Expect = 6.650e-27
Identity = 47/75 (62.67%), Postives = 62/75 (82.67%), Query Frame = 1
Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLKVLG 225
MK +D+DK+FD G ED++D FD ATR N E KRVNVDFP WMV+SL++E++RLG+TRQS+IK+WIA+RL+ G
Sbjct: 1 MKTSDMDKRFDEGIEDVIDDFDLSKATRPNREPKRVNVDFPVWMVESLDREAHRLGVTRQSIIKVWIAERLERAG 75
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match:
A0A2G2LNF0_9GAMM (CopG family transcriptional regulator n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2G2LNF0_9GAMM)
HSP 1 Score: 102 bits (253), Expect = 7.230e-27
Identity = 48/75 (64.00%), Postives = 60/75 (80.00%), Query Frame = 1
Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLKVLG 225
MKA ++DKKFD KEDILDAFD A R N EQKRVNVDFP WMV SL++E+ LG+TRQS+IK+W+A+RL+ +
Sbjct: 1 MKAKEIDKKFDDNKEDILDAFDLSKARRPNQEQKRVNVDFPTWMVTSLDKEARHLGVTRQSIIKVWLAERLEKIA 75
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match:
A0A2N1XLI1_9GAMM (CopG family transcriptional regulator n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-3 TaxID=2013799 RepID=A0A2N1XLI1_9GAMM)
HSP 1 Score: 100 bits (250), Expect = 2.450e-26
Identity = 45/72 (62.50%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLK 216
MKA D DKKFDLG DI+D D +A RIN EQKR+NVDFP W+V+SL++E+ R+G+TRQS+IK+W+ +RLK
Sbjct: 1 MKAKDFDKKFDLGNRDIIDDLDLSTARRINQEQKRINVDFPAWVVESLDREAARIGVTRQSIIKVWLVERLK 72
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match:
UPI000586DC7A (hypothetical protein n=1 Tax=Paraglaciecola arctica TaxID=1128911 RepID=UPI000586DC7A)
HSP 1 Score: 100 bits (249), Expect = 3.780e-26
Identity = 43/71 (60.56%), Postives = 63/71 (88.73%), Query Frame = 1
Query: 4 KATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLK 216
KAT+ D+KFD +EDIL+ FD +ATRIN++QKR+NVDFP+W+V SL++E++R+G+TRQS+IKMW+ +RL+
Sbjct: 4 KATEFDRKFDENQEDILEHFDLSTATRINYKQKRINVDFPEWVVNSLDREASRIGVTRQSIIKMWLVERLE 74
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match:
UPI001906D134 (CopG family transcriptional regulator n=1 Tax=Thiohalocapsa halophila TaxID=69359 RepID=UPI001906D134)
HSP 1 Score: 99.8 bits (247), Expect = 5.940e-26
Identity = 47/72 (65.28%), Postives = 61/72 (84.72%), Query Frame = 1
Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLK 216
MKA +LDK+FD GKE+ILDAFD +A R N KRVNVDFP WMV SL++E++RLG+TRQS+IK+W+A+RL+
Sbjct: 1 MKAHELDKRFDEGKEEILDAFDLATAHRPNQASKRVNVDFPAWMVDSLDREASRLGVTRQSIIKIWLAERLE 72
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match:
A0A557RKI4_9GAMM (CopG family transcriptional regulator n=2 Tax=Spiribacter TaxID=1335745 RepID=A0A557RKI4_9GAMM)
HSP 1 Score: 99.8 bits (247), Expect = 8.540e-26
Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLK 216
MKA D DKKFD G EDI+D D K+A R N E KRVNVDFP W+V+SL+QES R+G+TRQS+IK+W+ +RL+
Sbjct: 1 MKAEDFDKKFDEGAEDIIDDLDLKTARRANQESKRVNVDFPAWVVESLDQESARIGVTRQSIIKVWLVERLR 72
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match:
UPI0004704C05 (hypothetical protein n=1 Tax=Salinivibrio socompensis TaxID=1510206 RepID=UPI0004704C05)
HSP 1 Score: 99.0 bits (245), Expect = 1.630e-25
Identity = 44/72 (61.11%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLK 216
MKA D DKKFD GK+DI+D D +A R N EQKR+NVDFP W+V+SL++E+ R+G+TRQS+IK+W+ +RLK
Sbjct: 1 MKAKDFDKKFDEGKQDIIDDLDLSTARRANQEQKRINVDFPSWVVESLDREAARVGVTRQSIIKVWLVERLK 72
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 7.32e-29 / Id = 70.83 Expect = 2.82e-28 / Id = 65.33 Expect = 3.34e-27 / Id = 59.72 Expect = 6.65e-27 / Id = 62.67 Expect = 7.23e-27 / Id = 64.00 Expect = 2.45e-26 / Id = 62.50 Expect = 3.78e-26 / Id = 60.56 Expect = 5.94e-26 / Id = 65.28 Expect = 8.54e-26 / Id = 63.89 Expect = 1.63e-25 / Id = 61.11 Sequence A0A2D6TWY9_9PROT UPI001BC0EF17 A0A0M2VHV5_9GAMM A0A2N3G9C1_9ACTN A0A2G2LNF0_9GAMM A0A2N1XLI1_9GAMM UPI000586DC7A UPI001906D134 A0A557RKI4_9GAMM UPI0004704C05
Pages
back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_9874.1.1
>prot_C-australica_Contig_9874.1.1 ID=prot_C-australica_Contig_9874.1.1|Name=mRNA_C-australica_Contig_9874.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=76bp
MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQ ESNRLGITRQSLIKMWIADRLKVLG* back to top mRNA from alignment at C-australica_Contig_9874:204..431-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9874.1.1 ID=mRNA_C-australica_Contig_9874.1.1|Name=mRNA_C-australica_Contig_9874.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=228bp|location=Sequence derived from alignment at C-australica_Contig_9874:204..431- (Chrysoparadoxa australica CS_1217)ATGAAAGCTACTGATTTAGATAAGAAATTTGACCTTGGTAAGGAGGATAT
TCTGGATGCGTTTGATCCTAAGAGTGCTACAAGGATTAATCACGAACAAA
AAAGAGTTAATGTCGATTTTCCAAAGTGGATGGTCAAATCACTTAATCAG
GAATCCAATCGATTGGGAATCACAAGACAATCCTTAATCAAGATGTGGAT
TGCTGATCGATTGAAGGTTTTAGGATAA back to top Coding sequence (CDS) from alignment at C-australica_Contig_9874:204..431-
>mRNA_C-australica_Contig_9874.1.1 ID=mRNA_C-australica_Contig_9874.1.1|Name=mRNA_C-australica_Contig_9874.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=228bp|location=Sequence derived from alignment at C-australica_Contig_9874:204..431- (Chrysoparadoxa australica CS_1217) ATGAAAGCTACTGATTTAGATAAGAAATTTGACCTTGGTAAGGAGGATAT TCTGGATGCGTTTGATCCTAAGAGTGCTACAAGGATTAATCACGAACAAA AAAGAGTTAATGTCGATTTTCCAAAGTGGATGGTCAAATCACTTAATCAG GAATCCAATCGATTGGGAATCACAAGACAATCCTTAATCAAGATGTGGAT TGCTGATCGATTGAAGGTTTTAGGATAA back to top