mRNA_C-australica_Contig_985.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_985.1.1 vs. uniprot
Match: A0A7S3L2Y7_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L2Y7_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.100e-30 Identity = 63/117 (53.85%), Postives = 81/117 (69.23%), Query Frame = 2 Query: 251 TVSKPLALDLGKMFEKMTDGRQARASHILIKG-PDGEAKLEVLKGKIGDNANKFMNTAQQFSECPSAKNGGQLGKFKRGMMVAEFDDCVFSEEVGKVHGPVKTQFGHHLILIEERDE 598 ++S L +G F++ T +A ASHILI+G + E KL+ LK KIGD+ KF A +FSECPS GG LG+F G MV EFD+ VF+E+VG+VHGPVKTQFG+HLI I +R E Sbjct: 58 SLSMGLLDGVGGFFKRFTT--KATASHILIRGGAEAEFKLQDLKKKIGDSPVKFAEAAAKFSECPSKAQGGSLGEFGPGAMVKEFDEVVFNEKVGQVHGPVKTQFGYHLIYIADRTE 172
BLAST of mRNA_C-australica_Contig_985.1.1 vs. uniprot
Match: A0A7S1Y1S1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y1S1_9STRA) HSP 1 Score: 119 bits (299), Expect = 3.530e-30 Identity = 57/109 (52.29%), Postives = 78/109 (71.56%), Query Frame = 2 Query: 275 DLGKMFEKMTDGRQARASHILIKG-PDGEAKLEVLKGKIGDNANKFMNTAQQFSECPSAKNGGQLGKFKRGMMVAEFDDCVFSEEVGKVHGPVKTQFGHHLILIEERDE 598 ++G F++ T ++A ASHILIKG P+ KLE LK +I ++ KF A +FS CPSA+ GG+LG+F G MV EFD VF+++VG VHGP+KTQFG+HLI + +R E Sbjct: 35 EVGTFFKRFT--QKASASHILIKGGPEAANKLEELKVEIDNSPVKFAEAASRFSSCPSARKGGELGEFGPGQMVKEFDQVVFNDDVGVVHGPIKTQFGYHLIYVTDRTE 141
BLAST of mRNA_C-australica_Contig_985.1.1 vs. uniprot
Match: A0A7S1BYF0_9STRA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYF0_9STRA) HSP 1 Score: 118 bits (295), Expect = 4.670e-29 Identity = 61/117 (52.14%), Postives = 80/117 (68.38%), Query Frame = 2 Query: 251 TVSKPLALDLGKMFEKMTDGRQARASHILIKG-PDGEAKLEVLKGKIGDNANKFMNTAQQFSECPSAKNGGQLGKFKRGMMVAEFDDCVFSEEVGKVHGPVKTQFGHHLILIEERDE 598 T+S D+ K+F+ +T +A ASHILIKG + E KL+ LK +I D+ KF A +S CPS K+GG LG+F G MV EFD+ VF+E VG VHGP++TQFG+HLILI ER + Sbjct: 70 TLSMGFFDDVQKIFKSLTV--RASASHILIKGGAEAENKLQDLKEEIEDSPVKFAEMAAMYSSCPSGKSGGNLGEFGPGQMVKEFDNVVFNEAVGVVHGPIQTQFGYHLILINERSD 184
BLAST of mRNA_C-australica_Contig_985.1.1 vs. uniprot
Match: A0A7S2HC75_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HC75_9STRA) HSP 1 Score: 115 bits (289), Expect = 5.080e-29 Identity = 54/97 (55.67%), Postives = 68/97 (70.10%), Query Frame = 2 Query: 314 QARASHILIKGPDGEA--KLEVLKGKIGDNANKFMNTAQQFSECPSAKNGGQLGKFKRGMMVAEFDDCVFSEEVGKVHGPVKTQFGHHLILIEERDE 598 +A ASHILIKG D EA K++ +K +IG++ KF A Q S+CPS + GG LG+F R MV EFD VF+EEVG VHGP++T FG HLI IE R + Sbjct: 17 RAEASHILIKGTDAEAEQKIKAIKEEIGNDVTKFAEAATQHSDCPSGRQGGSLGEFGRYSMVPEFDKVVFNEEVGVVHGPIRTSFGFHLIFIERRSD 113
BLAST of mRNA_C-australica_Contig_985.1.1 vs. uniprot
Match: A0A7S2B6V5_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B6V5_9STRA) HSP 1 Score: 115 bits (287), Expect = 3.890e-28 Identity = 68/162 (41.98%), Postives = 90/162 (55.56%), Query Frame = 2 Query: 170 MKLFFIACA---ALCIAISTAFAPLTPVGRTVSKPLALDLGKMFEKMTDGRQARASHILIKGPDGEAKLE---------VLKGKIGDNA-------NKFMNTAQQFSECPSAKNGGQLGKFKRGMMVAEFDDCVFSEEVGKVHGPVKTQFGHHLILIEERDE 598 M++F +A + A +AF P T + +PL + G G QA ASHILI G D ++KLE LKGK D + F A++FS CPS + GG LG F +G MV EFD+ VF+++VG VHGP++TQFG HLILI +RDE Sbjct: 3 MRIFILAFSPSIATSFVPQSAFKPHTACHQNNIQPLKM--GFFDNLFGGGVQAEASHILISGDDADSKLEDIKQNIYKTALKGKSADMGVDAEALMSSFAQQARKFSSCPSGQKGGSLGCFGKGQMVPEFDEVVFNDQVGVVHGPIQTQFGSHLILITDRDE 162
BLAST of mRNA_C-australica_Contig_985.1.1 vs. uniprot
Match: A0A448ZAE9_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZAE9_9STRA) HSP 1 Score: 115 bits (287), Expect = 9.050e-28 Identity = 59/109 (54.13%), Postives = 72/109 (66.06%), Query Frame = 2 Query: 275 DLGKMFEKMTDGRQARASHILIKG-PDGEAKLEVLKGKIGDNANKFMNTAQQFSECPSAKNGGQLGKFKRGMMVAEFDDCVFSEEVGKVHGPVKTQFGHHLILIEERDE 598 DL F++ T +A ASHILIKG + E KLE LK +IGD+ F A Q+S CPS +GG LG F G MV EFD VF+E +G VHGP+KTQFG+HLI I +R E Sbjct: 87 DLQGFFKRFTT--RASASHILIKGGAEAENKLEDLKVEIGDSPVAFAKAAAQYSACPSGSSGGDLGSFGPGAMVKEFDAVVFNEPIGVVHGPIKTQFGYHLIYIRDRTE 193
BLAST of mRNA_C-australica_Contig_985.1.1 vs. uniprot
Match: R1DQG9_EMIHU (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DQG9_EMIHU) HSP 1 Score: 112 bits (279), Expect = 7.010e-27 Identity = 55/114 (48.25%), Postives = 73/114 (64.04%), Query Frame = 2 Query: 278 LGKMFEKMTDGRQARASHILI----KGPDGEAKLEVLKGKIGDNANKFMNTAQQFSECPSAKNGGQLGKFKRGMMVAEFDDCVFS---EEVGKVHGPVKTQFGHHLILIEERDE 598 LG F +TD R+ARASHIL D EA+ +K K+ +F + A +S CPSA GG LG+FKRG MV EFD+ VFS E++G++ GP+KTQFG H+I ++ER E Sbjct: 53 LGTAFAALTDDRKARASHILFGFKENAEDAEARARDVKCKLDSGEIEFESAASTYSSCPSAARGGDLGEFKRGAMVPEFDEAVFSQTSEQLGQIIGPIKTQFGWHIIRVDERSE 166
BLAST of mRNA_C-australica_Contig_985.1.1 vs. uniprot
Match: A0A2E4JD33_9BACT (Peptidylprolyl isomerase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E4JD33_9BACT) HSP 1 Score: 107 bits (268), Expect = 3.530e-26 Identity = 52/92 (56.52%), Postives = 63/92 (68.48%), Query Frame = 2 Query: 317 ARASHILIKGPDGEAKLEVLKGKIGDNANKFMNTAQQFSECPSAKNGGQLGKFKRGMMVAEFDDCVFSEEVGKVHGPVKTQFGHHLILIEER 592 ARA HIL+K D LK +I D AN F A++ S+CPS + GG LG+FK G MV EFD VFSEE+GKVHGP+KTQFG+HL+ I R Sbjct: 4 ARARHILVKSEDS---CTALKQEIADGAN-FAAVAKEHSQCPSGQQGGDLGEFKPGQMVPEFDKVVFSEEIGKVHGPIKTQFGYHLVEITNR 91
BLAST of mRNA_C-australica_Contig_985.1.1 vs. uniprot
Match: A0A1Z5J767_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J767_FISSO) HSP 1 Score: 117 bits (294), Expect = 4.300e-26 Identity = 65/146 (44.52%), Postives = 86/146 (58.90%), Query Frame = 2 Query: 176 LFFIACAALCIAIS-TAFAPLTPVGRTVSKPLALDLGKMFEKMTDG--RQARASHILIKGPDGEA--KLEVLKGKIGDNANKFMNTAQQFSECPSAKNGGQLGKFKRGMMVAEFDDCVFSEEVGKVHGPVKTQFGHHLILIEERDE 598 +FF LC+A T+F P L ++ + + R+A ASHILIKG E KL+ LK +I ++ KF+ A Q+SECPSA+ GG LG F G MV EFD VF+E VG+VHGP++TQFG+HLI I ER + Sbjct: 850 IFFFLVTLLCVANRVTSFVSKAPQHERTCSSLNMNFLENAQNFLKSFSRRAEASHILIKGGGAETEFKLQDLKQEIDNSPVKFVAAAAQYSECPSAQRGGNLGSFGPGAMVKEFDQVVFNEAVGQVHGPIRTQFGYHLIYIHERSD 995
BLAST of mRNA_C-australica_Contig_985.1.1 vs. uniprot
Match: A0A7S3FK64_9EUKA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FK64_9EUKA) HSP 1 Score: 109 bits (273), Expect = 5.390e-26 Identity = 52/100 (52.00%), Postives = 67/100 (67.00%), Query Frame = 2 Query: 290 FEKMTDGRQARASHILIKGPDGEA--KLEVLKGKIGDNANKFMNTAQQFSECPSAKNGGQLGKFKRGMMVAEFDDCVFSEEVGKVHGPVKTQFGHHLILI 583 FE++TD R ARASHIL+KG D + ++ K ++GD+ F A+ S+CPS GG LG F RG MV EFD VFS+E G V+GPV+T FGHHLI + Sbjct: 61 FERLTDFRVARASHILLKGFDDDTVTRMAAWKAELGDDPEAFAELARASSQCPSRVKGGDLGFFTRGKMVKEFDRVVFSQEPGYVYGPVRTDFGHHLIYL 160 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_985.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_985.1.1 >prot_C-australica_Contig_985.1.1 ID=prot_C-australica_Contig_985.1.1|Name=mRNA_C-australica_Contig_985.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=145bp MKLFFIACAALCIAISTAFAPLTPVGRTVSKPLALDLGKMFEKMTDGRQAback to top mRNA from alignment at C-australica_Contig_985:2..1234+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_985.1.1 ID=mRNA_C-australica_Contig_985.1.1|Name=mRNA_C-australica_Contig_985.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1233bp|location=Sequence derived from alignment at C-australica_Contig_985:2..1234+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_985:2..1234+ >mRNA_C-australica_Contig_985.1.1 ID=mRNA_C-australica_Contig_985.1.1|Name=mRNA_C-australica_Contig_985.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=435bp|location=Sequence derived from alignment at C-australica_Contig_985:2..1234+ (Chrysoparadoxa australica CS_1217)back to top |