mRNA_C-australica_Contig_9794.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: A0A840UB29_9GAMM (Shikimate kinase n=1 Tax=Marinobacter oulmenensis TaxID=643747 RepID=A0A840UB29_9GAMM) HSP 1 Score: 181 bits (459), Expect = 2.650e-56 Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 1 Query: 1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 291
MSLPKRVVLVGPMGAGKSTIGRMLA+ELGYRFLDSDRIIEERCGANIPWIFDVEGE+GFRLRETAMLDELS ED+TVLATGGGAV R ENH +L+RD
Sbjct: 1 MSLPKRVVLVGPMGAGKSTIGRMLARELGYRFLDSDRIIEERCGANIPWIFDVEGEEGFRLRETAMLDELSGEDKTVLATGGGAVTRPENHELLRRD 97
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: A0A366GNR5_9GAMM (Shikimate kinase n=6 Tax=Marinobacter TaxID=2742 RepID=A0A366GNR5_9GAMM) HSP 1 Score: 179 bits (455), Expect = 8.360e-56 Identity = 86/97 (88.66%), Postives = 93/97 (95.88%), Query Frame = 1 Query: 1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 291
MSLPKR+VLVGPMGAGKSTIGRMLA+ELGYRFLD+DRIIEERCGANIPWIFDVEGEDGFR RETAML++LS E +TVLATGGGAVMR ENHP+LKRD
Sbjct: 1 MSLPKRIVLVGPMGAGKSTIGRMLARELGYRFLDTDRIIEERCGANIPWIFDVEGEDGFRQRETAMLEQLSAEPQTVLATGGGAVMRPENHPLLKRD 97
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: UPI001245398F (shikimate kinase AroK n=1 Tax=Marinobacter halotolerans TaxID=1569211 RepID=UPI001245398F) HSP 1 Score: 178 bits (452), Expect = 2.390e-55 Identity = 88/97 (90.72%), Postives = 91/97 (93.81%), Query Frame = 1 Query: 1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 291
MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFR RETAML ELS + +TVLATGGGAVMR+ENH LKRD
Sbjct: 1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRQRETAMLSELSEQPQTVLATGGGAVMREENHAHLKRD 97
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: A0A4Z1C5K2_9GAMM (Shikimate kinase n=1 Tax=Marinobacter confluentis TaxID=1697557 RepID=A0A4Z1C5K2_9GAMM) HSP 1 Score: 177 bits (450), Expect = 4.810e-55 Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 1 Query: 1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 291
MSLPKRVVLVGPMGAGKSTIGRMLA+ELGYRF+DSDRIIEERCGANIPWIFDVEGEDGFR RETAML+EL+ E +VLATGGGAVMR+ENHP LKRD
Sbjct: 1 MSLPKRVVLVGPMGAGKSTIGRMLARELGYRFMDSDRIIEERCGANIPWIFDVEGEDGFRQRETAMLNELADEPESVLATGGGAVMREENHPHLKRD 97
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: A0A285Q9B9_9GAMM (Shikimate kinase n=1 Tax=Marinobacter sp. LV10R510-11A TaxID=1415568 RepID=A0A285Q9B9_9GAMM) HSP 1 Score: 177 bits (450), Expect = 4.810e-55 Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 1 Query: 1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 291
MSLPKRVVL+GPMGAGKSTIGRMLA+ELGYRFLDSDRIIE RCGANIPWIFDVEGE GFRLRETAMLDELS E +VLATGGGAVMR ENHP+LK+D
Sbjct: 1 MSLPKRVVLIGPMGAGKSTIGRMLARELGYRFLDSDRIIEARCGANIPWIFDVEGEGGFRLRETAMLDELSAEPESVLATGGGAVMRAENHPLLKKD 97
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: A0A072MWD0_9GAMM (Shikimate kinase n=2 Tax=Marinobacter TaxID=2742 RepID=A0A072MWD0_9GAMM) HSP 1 Score: 177 bits (449), Expect = 6.830e-55 Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 1 Query: 1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 291
M LPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIE+RCGANIPWIFDVEGE+GFR RETAMLDELS E+RTVLATGGGAVM+ ENH +LK+D
Sbjct: 1 MPLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEDRCGANIPWIFDVEGEEGFRQRETAMLDELSLEERTVLATGGGAVMKPENHSLLKKD 97
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: A0A1V2DVG2_9GAMM (Shikimate kinase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1V2DVG2_9GAMM) HSP 1 Score: 177 bits (448), Expect = 9.700e-55 Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 1 Query: 1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 291
MSLPKR+VLVGPMGAGKSTIGRMLA+ELGYRFLD+DRIIEERCGANIPWIFDVEGEDGFR RETAML ELS E RTVLATGGGAVMR+EN P+LK+D
Sbjct: 1 MSLPKRIVLVGPMGAGKSTIGRMLARELGYRFLDTDRIIEERCGANIPWIFDVEGEDGFRQRETAMLRELSQEPRTVLATGGGAVMREENLPLLKQD 97
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: A0A1D9GMF6_9GAMM (Shikimate kinase n=3 Tax=Marinobacter TaxID=2742 RepID=A0A1D9GMF6_9GAMM) HSP 1 Score: 177 bits (448), Expect = 9.700e-55 Identity = 87/97 (89.69%), Postives = 91/97 (93.81%), Query Frame = 1 Query: 1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 291
MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIE+RCGANIPWIFDVEGE+GFR RETAML ELS E TVLATGGGAVMRQENH +LK+D
Sbjct: 1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEDRCGANIPWIFDVEGEEGFRQRETAMLKELSSEPNTVLATGGGAVMRQENHLLLKKD 97
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: W5YJ93_9GAMM (Shikimate kinase n=32 Tax=Gammaproteobacteria TaxID=1236 RepID=W5YJ93_9GAMM) HSP 1 Score: 176 bits (445), Expect = 2.770e-54 Identity = 88/97 (90.72%), Postives = 90/97 (92.78%), Query Frame = 1 Query: 1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 291
MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAML+ELS TVLATGGGAVMR EN P LK+D
Sbjct: 1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLEELSLLPDTVLATGGGAVMRPENRPFLKQD 97
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Match: UPI00193A89B0 (shikimate kinase AroK n=1 Tax=Marinobacter sediminum TaxID=256323 RepID=UPI00193A89B0) HSP 1 Score: 176 bits (445), Expect = 2.770e-54 Identity = 88/97 (90.72%), Postives = 90/97 (92.78%), Query Frame = 1 Query: 1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLDELSHEDRTVLATGGGAVMRQENHPILKRD 291
MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAML+ELS TVLATGGGAVMR EN P LK+D
Sbjct: 1 MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIFDVEGEDGFRLRETAMLEELSLLPDTVLATGGGAVMRPENRPFLKQD 97 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9794.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_9794.1.1 >prot_C-australica_Contig_9794.1.1 ID=prot_C-australica_Contig_9794.1.1|Name=mRNA_C-australica_Contig_9794.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=97bp MSLPKRVVLVGPMGAGKSTIGRMLAKELGYRFLDSDRIIEERCGANIPWIback to top mRNA from alignment at C-australica_Contig_9794:1..291- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_9794.1.1 ID=mRNA_C-australica_Contig_9794.1.1|Name=mRNA_C-australica_Contig_9794.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=291bp|location=Sequence derived from alignment at C-australica_Contig_9794:1..291- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_9794:1..291- >mRNA_C-australica_Contig_9794.1.1 ID=mRNA_C-australica_Contig_9794.1.1|Name=mRNA_C-australica_Contig_9794.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=291bp|location=Sequence derived from alignment at C-australica_Contig_9794:1..291- (Chrysoparadoxa australica CS_1217)back to top |