Homology
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match:
A0A2D4SCM8_9GAMM (Fatty acid oxidation complex subunit alpha FadJ n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4SCM8_9GAMM)
HSP 1 Score: 71.6 bits (174), Expect = 3.020e-13
Identity = 34/54 (62.96%), Postives = 43/54 (79.63%), Query Frame = 1
Query: 1 MASKQSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 162
M KQ+ F++E RDD VAVVRM+VPGEAHNVLKAEF DEFE LF +L+ + ++
Sbjct: 1 MPKKQTAFELEIRDDNVAVVRMNVPGEAHNVLKAEFTDEFEDLFRQLKGNGQLQ 54
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match:
A0A258C3A2_9ALTE (Fatty acid oxidation complex subunit alpha FadJ (Fragment) n=1 Tax=Alishewanella sp. 32-51-5 TaxID=1970315 RepID=A0A258C3A2_9ALTE)
HSP 1 Score: 60.5 bits (145), Expect = 7.020e-10
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 1
Query: 1 MASKQSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 162
M S+F + RDD VAV+ MD+PGE+ NVLKA FADE +A+ ++L D+T+K
Sbjct: 1 MTETVSSFSLNIRDDKVAVITMDIPGESMNVLKASFADEIDAMLKQLANDSTLK 54
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match:
A0A3L8Q213_9GAMM (Fatty acid oxidation complex subunit alpha FadJ n=2 Tax=Parashewanella TaxID=2547964 RepID=A0A3L8Q213_9GAMM)
HSP 1 Score: 61.6 bits (148), Expect = 1.020e-9
Identity = 27/50 (54.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 13 QSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 162
+ TF++E+RDDG+AVV MDVPG+ N L+AEFA+E L ++ DN+IK
Sbjct: 2 ERTFNLERRDDGIAVVTMDVPGDTMNTLRAEFANEISELLSEIKRDNSIK 51
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match:
UPI00109F6413 (fatty acid oxidation complex subunit alpha FadJ n=1 Tax=Ningiella ruwaisensis TaxID=2364274 RepID=UPI00109F6413)
HSP 1 Score: 61.2 bits (147), Expect = 1.390e-9
Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 1
Query: 16 STFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 162
S F +E+RDDG+A++ MDVPGE+ N LKA+F DE A+ + ++ DN IK
Sbjct: 2 SAFKLEKRDDGIAILTMDVPGESMNTLKADFGDEISAILDDIQADNAIK 50
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match:
A0A516HDE4_9GAMM (Fatty acid oxidation complex subunit alpha FadJ n=2 Tax=Thalassotalea TaxID=1518149 RepID=A0A516HDE4_9GAMM)
HSP 1 Score: 61.2 bits (147), Expect = 1.390e-9
Identity = 26/49 (53.06%), Postives = 40/49 (81.63%), Query Frame = 1
Query: 16 STFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 162
STF +E++D+G+A ++MDV GE N L+AEFADEF + E++++DN+IK
Sbjct: 5 STFTLERQDNGIAFLKMDVVGETMNTLRAEFADEFSTVLEKIKSDNSIK 53
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match:
A0A3M1TPM8_9BACT (Fatty acid oxidation complex subunit alpha FadJ n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1TPM8_9BACT)
HSP 1 Score: 61.2 bits (147), Expect = 1.390e-9
Identity = 32/52 (61.54%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 7 SKQSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 162
S TF +E RDDGVAVV MDVPGE N LKA FADEFE LF L D ++
Sbjct: 2 SDSKTFRVETRDDGVAVVWMDVPGEPVNTLKASFADEFEELFAGLAGDANLR 53
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match:
I8UEH0_9ALTE (Fatty acid oxidation complex subunit alpha n=5 Tax=Alishewanella TaxID=111142 RepID=I8UEH0_9ALTE)
HSP 1 Score: 60.5 bits (145), Expect = 2.600e-9
Identity = 28/54 (51.85%), Postives = 39/54 (72.22%), Query Frame = 1
Query: 1 MASKQSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 162
M S+F + RDD VAV+ MD+PGE+ NVLKA FADE +A+ ++L D+T+K
Sbjct: 1 MTDTVSSFSLSIRDDKVAVITMDIPGESMNVLKASFADEIDAMLKQLANDSTLK 54
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match:
A0A1S2TY10_9GAMM (Fatty acid oxidation complex subunit alpha n=69 Tax=Shewanella TaxID=22 RepID=A0A1S2TY10_9GAMM)
HSP 1 Score: 60.5 bits (145), Expect = 2.600e-9
Identity = 26/54 (48.15%), Postives = 38/54 (70.37%), Query Frame = 1
Query: 1 MASKQSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 162
M + +F + +RDDG+A++ MDVPGE+ N LKAEF E AL ++TD++IK
Sbjct: 1 MENSNKSFSLSRRDDGIAILSMDVPGESMNTLKAEFGPEISALLSEIKTDSSIK 54
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match:
UPI000E2064FA (fatty acid oxidation complex subunit alpha FadJ n=1 Tax=Gallaecimonas mangrovi TaxID=2291597 RepID=UPI000E2064FA)
HSP 1 Score: 60.5 bits (145), Expect = 2.600e-9
Identity = 27/48 (56.25%), Postives = 35/48 (72.92%), Query Frame = 1
Query: 19 TFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 162
TF +E+R+DG+ ++RMDVPGE N LKA FADE A+ E +R D IK
Sbjct: 5 TFSLERREDGIGIIRMDVPGETMNTLKAAFADEIRAILEDVRHDPAIK 52
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Match:
A0A350QKX3_9BACT (3-hydroxyacyl-CoA dehydrogenase (Fragment) n=1 Tax=Candidatus Azambacteria bacterium TaxID=2053511 RepID=A0A350QKX3_9BACT)
HSP 1 Score: 60.1 bits (144), Expect = 3.510e-9
Identity = 26/51 (50.98%), Postives = 41/51 (80.39%), Query Frame = 1
Query: 10 KQSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTDNTIK 162
+Q++F + RDD VAV+ MD+PGE+ NVLKA FADE +A+ + L++D+++K
Sbjct: 5 QQNSFSLALRDDHVAVITMDIPGESMNVLKASFADEIDAILKTLQSDSSVK 55
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9792.2.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.02e-13 / Id = 62.96 Expect = 7.02e-10 / Id = 51.85 Expect = 1.02e-9 / Id = 54.00 Expect = 1.39e-9 / Id = 53.06 Expect = 1.39e-9 / Id = 53.06 Expect = 1.39e-9 / Id = 61.54 Expect = 2.60e-9 / Id = 51.85 Expect = 2.60e-9 / Id = 48.15 Expect = 2.60e-9 / Id = 56.25 Expect = 3.51e-9 / Id = 50.98 Sequence A0A2D4SCM8_9GAMM A0A258C3A2_9ALTE A0A3L8Q213_9GAMM UPI00109F6413 A0A516HDE4_9GAMM A0A3M1TPM8_9BACT I8UEH0_9ALTE A0A1S2TY10_9GAMM UPI000E2064FA A0A350QKX3_9BACT Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 1 Seed ortholog 1129374.AJE_02761 Preferred name fadJ PFAMs 3HCDH,3HCDH_N,ECH_1 Model size 162 Max annot lvl 1236|Gammaproteobacteria KEGG rclass RC00029,RC00099,RC00117,RC00241,RC00525,RC00831,RC00834,RC00896,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115 KEGG ko ko:K01782 KEGG Reaction R01975,R03026,R03045,R03276,R04137,R04170,R04203,R04204,R04224,R04737,R04738,R04739,R04740,R04741,R04744,R04745,R04746,R04748,R04749,R05066,R05305,R06411,R06412,R06941,R06942,R07935,R07951,R08093,R08094 KEGG Pathway ko00071,ko00280,ko00281,ko00310,ko00362,ko00380,ko00410,ko00640,ko00650,ko00903,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00362,map00380,map00410,map00640,map00650,map00903,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212 KEGG Module M00032,M00087 Hectar predicted targeting category no signal peptide or anchor GOs GO:0003674,GO:0003824,GO:0003857,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 Exons 1 Evalue 4.26e-10 EggNOG OGs COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,1RMZ8@1236|Gammaproteobacteria,465IT@72275|Alteromonadaceae EC 1.1.1.35,4.2.1.17,5.1.2.3 Description Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities Cds size 162 COG category I BiGG Reaction iECABU_c1320.ECABU_c26730,iETEC_1333.ETEC_2476,iEcE24377_1341.EcE24377A_2637,ic_1306.c2886 BRITE ko00000,ko00001,ko00002,ko01000
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682588845.3747118-CDS-C-australica_Contig_9792:690..852 1682588845.3747118-CDS-C-australica_Contig_9792:690..852 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_9792 691..852 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_9792.2.1
>prot_C-australica_Contig_9792.2.1 ID=prot_C-australica_Contig_9792.2.1|Name=mRNA_C-australica_Contig_9792.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=54bp
MASKQSTFDIEQRDDGVAVVRMDVPGEAHNVLKAEFADEFEALFERLRTD back to top mRNA from alignment at C-australica_Contig_9792:691..852+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9792.2.1 ID=mRNA_C-australica_Contig_9792.2.1|Name=mRNA_C-australica_Contig_9792.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=162bp|location=Sequence derived from alignment at C-australica_Contig_9792:691..852+ (Chrysoparadoxa australica CS_1217)ATGGCAAGCAAACAATCGACGTTCGACATCGAGCAGCGCGACGACGGCGT
GGCCGTGGTGCGCATGGACGTGCCCGGCGAGGCGCACAACGTGCTCAAGG
CGGAATTCGCCGACGAGTTCGAGGCGCTGTTCGAACGGCTGCGCACGGAC
AACACGATCAAG back to top Coding sequence (CDS) from alignment at C-australica_Contig_9792:691..852+
>mRNA_C-australica_Contig_9792.2.1 ID=mRNA_C-australica_Contig_9792.2.1|Name=mRNA_C-australica_Contig_9792.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=162bp|location=Sequence derived from alignment at C-australica_Contig_9792:691..852+ (Chrysoparadoxa australica CS_1217) back to top