Homology
BLAST of mRNA_C-australica_Contig_977.4.1 vs. uniprot
Match:
A0A836CN64_9STRA (KRR1 small subunit processome component n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN64_9STRA)
HSP 1 Score: 444 bits (1143), Expect = 1.800e-146
Identity = 217/282 (76.95%), Postives = 248/282 (87.94%), Query Frame = 1
Query: 28 KNHNKYRRAKPWDHAGINHWEQEKWTGDEMCGTLLEESSFATLFPKYREKYLREVWPIVTRALEKVGISCELDLVEGSMSVCTTRKTRDPYIIVKARDLIKLLARSIPAAQALRILEDDIQCDIIKIGGMVRSKERFVKRRQRLLGPDGATLKALELLSGCYILVQGNTVACMGSYAGLKSARKVVVECMQNVHPVYNIKTLMIKKELEKDPALAGEDWSRFLPHFKKKNVARKKPHKVNKKKEYTPFPPPQSESKVDKQLESGEYFLNDKQRKVKAQAQRR 873
KN+ KYRR KPWD+ I+HW Q +W ++M G LLEESSFATLFPKYREKYLREVWP+VT+ALEK GI CELDLVEGSM+V T+R+TRDPY +VKARD++KLLARSIPAAQALR LED + DIIKIGGMVR+KERFVKRRQRL+GPDGATLKALELL+GCYILVQGNTVACMGSYAGLK ARKV+V+CM N+HPVYNIKTLMI++EL KDPALAGEDWSRFLP F K+NV RKKP V +K+ YTPFPP Q SKVD QLESGEYFLN+ QRK +A+A++R
Sbjct: 17 KNNRKYRRDKPWDNESIDHWAQPEWKDEDMPGPLLEESSFATLFPKYREKYLREVWPMVTKALEKRGIGCELDLVEGSMTVRTSRRTRDPYAVVKARDVVKLLARSIPAAQALRALEDGVNADIIKIGGMVRNKERFVKRRQRLVGPDGATLKALELLTGCYILVQGNTVACMGSYAGLKQARKVIVDCMNNIHPVYNIKTLMIRRELAKDPALAGEDWSRFLPSFNKRNVPRKKPRSVREKRAYTPFPPAQLPSKVDLQLESGEYFLNEAQRKGRARAEKR 298
BLAST of mRNA_C-australica_Contig_977.4.1 vs. uniprot
Match:
A0A7S2DCQ6_9STRA (KRR-R motif-containing protein 1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DCQ6_9STRA)
HSP 1 Score: 414 bits (1065), Expect = 2.210e-134
Identity = 206/288 (71.53%), Postives = 242/288 (84.03%), Query Frame = 1
Query: 28 KNHNKYRRAKPWDHAGINHWEQEKWTGDEMCGTLLEESSFATLFPKYREKYLREVWPIVTRALEKVGISCELDLVEGSMSVCTTRKTRDPYIIVKARDLIKLLARSIPAAQALRILEDDIQCDIIKIGGMVRSKERFVKRRQRLLGPDGATLKALELLSGCYILVQGNTVACMGSYAGLKSARKVVVECMQNVHPVYNIKTLMIKKELEKDPALAGEDWSRFLPHFKKKNVARKKPHKVNK--KKEYTPFPPPQSESKVDKQLESGEYFLNDKQRKVKAQAQRRAAAA 885
KNHNKYRR KPWD+ I+HW+ E W +M G+LLEESSFATLFPKYREKYLREVWP+VTR L+K I+CELDL+EGSM+V TTRKT DPYII+KARDLIKLLARSIP QAL+ILEDD+ CD+IKIGGMV +KERFV+RRQR+LGPDGATLKALELL+ CY+LVQGNTV+ MG+ G+K RKVV +CM N+HPVYNIK LMIK+EL KDPALAGE+W RFLP F KK V RKKP KV K+ YTPFPP Q+ SKVD QLESGEYFL++ QRK + +++++A AA
Sbjct: 4 KNHNKYRRDKPWDNDEIDHWKLEDWNEGDMHGSLLEESSFATLFPKYREKYLREVWPLVTRTLDKQKIACELDLIEGSMTVKTTRKTNDPYIILKARDLIKLLARSIPVLQALKILEDDMHCDVIKIGGMVGNKERFVRRRQRILGPDGATLKALELLTECYVLVQGNTVSTMGTIKGIKQVRKVVEDCMNNIHPVYNIKILMIKRELAKDPALAGENWDRFLPKFAKKTVDRKKPFKVRDTAKRTYTPFPPAQTPSKVDLQLESGEYFLSETQRKARRRSEKQADAA 291
BLAST of mRNA_C-australica_Contig_977.4.1 vs. uniprot
Match:
A0A7S1UII9_9STRA (KRR1 small subunit processome component n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UII9_9STRA)
HSP 1 Score: 409 bits (1051), Expect = 2.700e-133
Identity = 200/288 (69.44%), Postives = 241/288 (83.68%), Query Frame = 1
Query: 37 NKYRRAKPWDHAGINHWEQEKWT-GDEMCGTLLEESSFATLFPKYREKYLREVWPIVTRALEKVGISCELDLVEGSMSVCTTRKTRDPYIIVKARDLIKLLARSIPAAQALRILEDDIQCDIIKIGGMVRSKERFVKRRQRLLGPDGATLKALELLSGCYILVQGNTVACMGSYAGLKSARKVVVECMQNVHPVYNIKTLMIKKELEKDPALAGEDWSRFLPHFKKKNVARKKPHKVNKK--KEYTPFPPPQSESKVDKQLESGEYFLNDKQRKVKAQAQRRAAAAEK 891
NKYRRAKPWDH GI+HW+QE+W GD G LLEESSFATLFPKYREKYLREVWP+VTRAL+K GI CEL+L+EGSM+V TTRKT DPY I+KARD+IKLLARS+PA QAL+ LED++ CDIIKIGG+VR+K+RFVKRRQRL+GPDG+TLKALELL+GCY+LVQGNTV+ MG + G+K RKVV++CM+N+HP+YNIKTLMIK+EL KDP LA + W RFLP F+K+NV R+KP KV + YTPFPP Q SKVD QLESGEYFL+ +Q++ Q ++ AA K
Sbjct: 16 NKYRRAKPWDHDGIDHWKQEEWNEGDMAGGPLLEESSFATLFPKYREKYLREVWPMVTRALQKAGIGCELNLIEGSMTVKTTRKTWDPYSILKARDVIKLLARSVPAPQALKALEDNVACDIIKIGGLVRNKDRFVKRRQRLVGPDGSTLKALELLTGCYVLVQGNTVSAMGPHKGIKQVRKVVIDCMENIHPIYNIKTLMIKRELAKDPTLANQSWDRFLPRFQKRNVKRRKPQKVRDTAARTYTPFPPAQQPSKVDMQLESGEYFLSAEQKESLKQLEKTQTAARK 303
BLAST of mRNA_C-australica_Contig_977.4.1 vs. uniprot
Match:
A0A7S3PWU0_9STRA (KRR1 small subunit processome component n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PWU0_9STRA)
HSP 1 Score: 406 bits (1043), Expect = 2.550e-131
Identity = 203/280 (72.50%), Postives = 233/280 (83.21%), Query Frame = 1
Query: 28 KNHNKYRRAKPWDHAGINHWEQEKWTGDE----MCGTLLEESSFATLFPKYREKYLREVWPIVTRALEKVGISCELDLVEGSMSVCTTRKTRDPYIIVKARDLIKLLARSIPAAQALRILEDDIQCDIIKIGGMVRSKERFVKRRQRLLGPDGATLKALELLSGCYILVQGNTVACMGSYAGLKSARKVVVECMQNVHPVYNIKTLMIKKELEKDPALAGEDWSRFLPHFKKKNVARKKPHKVNKKKEYTPFPPPQSESKVDKQLESGEYFLNDKQRKVK 855
KNHNK+RR KPWD+ INHWE + W +E G+LLEESSFATLFPKYREKYLREVWPIVTRAL+K I CEL+LVEGSM+V T++KT DPYII+KARDLIKLLARSIP QAL++L DD +IIKIGG+VR+KERFVKRRQRL+GPDGATLKALELL+ CYILVQGNTVA MGS G+K AR+VV++CM N+HPVYNIK LMI KEL KDP LA EDWSRFLP FKKKNV RKKP K YTPFPP Q +SKVD+QL+SGEYFL+++QRK +
Sbjct: 13 KNHNKHRRDKPWDNDSINHWEIKSWKAEEGDALPGGSLLEESSFATLFPKYREKYLREVWPIVTRALDKYSIKCELNLVEGSMTVFTSKKTSDPYIILKARDLIKLLARSIPCQQALKVLNDDSHSEIIKIGGLVRNKERFVKRRQRLIGPDGATLKALELLTECYILVQGNTVAVMGSVKGIKRAREVVIDCMNNIHPVYNIKRLMIMKELAKDPKLATEDWSRFLPSFKKKNVQRKKPKNKRIKGSYTPFPPAQIQSKVDQQLDSGEYFLSERQRKAR 292
BLAST of mRNA_C-australica_Contig_977.4.1 vs. uniprot
Match:
A0A7R9YG52_9STRA (KRR1 small subunit processome component n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YG52_9STRA)
HSP 1 Score: 404 bits (1037), Expect = 5.060e-131
Identity = 196/273 (71.79%), Postives = 234/273 (85.71%), Query Frame = 1
Query: 40 KYRRAKPWDHAGINHWEQEKWT-GDEMCGTLLEESSFATLFPKYREKYLREVWPIVTRALEKVGISCELDLVEGSMSVCTTRKTRDPYIIVKARDLIKLLARSIPAAQALRILEDDIQCDIIKIGGMVRSKERFVKRRQRLLGPDGATLKALELLSGCYILVQGNTVACMGSYAGLKSARKVVVECMQNVHPVYNIKTLMIKKELEKDPALAGEDWSRFLPHFKKKNVARKKPHKVNK--KKEYTPFPPPQSESKVDKQLESGEYFLNDKQRK 849
+YRR KPWDH G++HW QE++ GD + G+LLEESSFATLFPKYREKYLREVWP+VTR L+K G+ CEL+L+EGSM+V TTRKT DPYII+KARD+IKLLARS+PAAQAL+ LEDD+ DI+KIGG+VR+KERFVKRRQRLLGPDG+TLKALELL+GCY+LVQGNTV+ MG Y GLK RKVV++CMQN+HP+YNIKTLMIK+EL KDP LA + W RFLP FKK+NV RKKP + +++YTPFPP SKVD QLESGEYFL+ +QRK
Sbjct: 12 QYRREKPWDHDGVDHWAQEEFKEGDMVGGSLLEESSFATLFPKYREKYLREVWPLVTRTLKKYGVGCELNLIEGSMTVKTTRKTWDPYIILKARDVIKLLARSVPAAQALKALEDDVASDIMKIGGLVRNKERFVKRRQRLLGPDGSTLKALELLTGCYVLVQGNTVSAMGPYKGLKQVRKVVMDCMQNIHPIYNIKTLMIKRELAKDPTLADQPWDRFLPKFKKRNVKRKKPKTIRDTTERKYTPFPPAPQPSKVDLQLESGEYFLSQEQRK 284
BLAST of mRNA_C-australica_Contig_977.4.1 vs. uniprot
Match:
B8C0X8_THAPS (KRR1 small subunit processome component n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0X8_THAPS)
HSP 1 Score: 405 bits (1041), Expect = 1.220e-130
Identity = 200/293 (68.26%), Postives = 241/293 (82.25%), Query Frame = 1
Query: 28 KNHNKYRRAKPWDHAGINHWEQEKW---TGDEMC--GTLLEESSFATLFPKYREKYLREVWPIVTRALEKVGISCELDLVEGSMSVCTTRKTRDPYIIVKARDLIKLLARSIPAAQALRILEDDIQCDIIKIGGMVRSKERFVKRRQRLLGPDGATLKALELLSGCYILVQGNTVACMGSYAGLKSARKVVVECMQNVHPVYNIKTLMIKKELEKDPALAGEDWSRFLPHFKKKNVARKKPHKVNKKKEYTPFPPPQSESKVDKQLESGEYFLNDKQRKVKAQAQRRAAAAEK 891
KNHNKYRR KPWD+ I+HW W T ++ G LLEESSFATLFPKYREKYLREVWP+VT++L+K ++CEL+LVEGSM+V TT+KT DPYII+KARDLIKLLARSIPA QAL+IL DD C+IIKIGG+VR+KERFVKRRQRL+GPDGATLKALELL+ CYILVQGNTV+ MG+Y G+K R V+++CM N+HPVYNIK LMI +ELE+DP L E W RFLP FKKKNV R+KPH++ KKK YTPFPP Q SK+D QLESGEYFL++++RK K +++ A+ EK
Sbjct: 22 KNHNKYRRDKPWDNPSIDHWAITPWDEETNNDSLPGGRLLEESSFATLFPKYREKYLREVWPLVTKSLDKYKVACELNLVEGSMTVRTTKKTSDPYIILKARDLIKLLARSIPAPQALKILNDDHHCEIIKIGGLVRNKERFVKRRQRLIGPDGATLKALELLTQCYILVQGNTVSVMGTYKGIKQTRNVILDCMNNIHPVYNIKRLMIMRELERDPKLKEESWERFLPTFKKKNVKRRKPHQLKKKKSYTPFPPAQQPSKIDLQLESGEYFLSERERKAKKLGEKKIASMEK 314
BLAST of mRNA_C-australica_Contig_977.4.1 vs. uniprot
Match:
A0A024TMB1_9STRA (KRR1 small subunit processome component n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TMB1_9STRA)
HSP 1 Score: 403 bits (1035), Expect = 1.370e-130
Identity = 191/277 (68.95%), Postives = 233/277 (84.12%), Query Frame = 1
Query: 40 KYRRAKPWDHAGINHWEQEKWTGDEMCGTLLEESSFATLFPKYREKYLREVWPIVTRALEKVGISCELDLVEGSMSVCTTRKTRDPYIIVKARDLIKLLARSIPAAQALRILEDDIQCDIIKIGGMVRSKERFVKRRQRLLGPDGATLKALELLSGCYILVQGNTVACMGSYAGLKSARKVVVECMQNVHPVYNIKTLMIKKELEKDPALAGEDWSRFLPHFKKKNVARKKPHKVNKKKEYTPFPPPQSESKVDKQLESGEYFLNDKQRKVKAQAQR 870
K+R+ KPWD I HW+ E W ++ +LEESSFATLFPKYREKYLREVWPIVT+AL+ V I+CEL+L+EGSM+V TTRKT DPYI++KARDLIKLLARSIP QA++IL+D++QCDIIKIGG+VR+KERFVKRRQRL+GPDGATLKA+ELL+ CY+LVQGNTV+ MG Y GL+ RK+V +C QNVHP+YNIKTLMIK+EL KDP LAGE+W RFLP FKKKNV KKPH V +KK YTPFPP + SK+DK++ESGEYF+ + +RK QA++
Sbjct: 11 KHRKDKPWDSDDIAHWKVESWKDEDNKSGMLEESSFATLFPKYREKYLREVWPIVTKALDSVKIACELNLIEGSMTVRTTRKTTDPYIVLKARDLIKLLARSIPVNQAVKILDDEVQCDIIKIGGLVRNKERFVKRRQRLVGPDGATLKAIELLTNCYVLVQGNTVSAMGPYGGLRHVRKIVEDCFQNVHPIYNIKTLMIKRELSKDPKLAGENWDRFLPVFKKKNVQTKKPHVVREKKAYTPFPPAPTPSKIDKEIESGEYFMKEHERKAMKQAKK 287
BLAST of mRNA_C-australica_Contig_977.4.1 vs. uniprot
Match:
A0A2V0NQC2_9CHLO (KRR-R motif-containing protein 1 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NQC2_9CHLO)
HSP 1 Score: 405 bits (1041), Expect = 3.670e-130
Identity = 195/276 (70.65%), Postives = 236/276 (85.51%), Query Frame = 1
Query: 28 KNHNKYRRAKPWDHAGINHWEQEKWTGDEMCGTLLEESSFATLFPKYREKYLREVWPIVTRALEKVGISCELDLVEGSMSVCTTRKTRDPYIIVKARDLIKLLARSIPAAQALRILEDDIQCDIIKIGGMVRSKERFVKRRQRLLGPDGATLKALELLSGCYILVQGNTVACMGSYAGLKSARKVVVECMQNVHPVYNIKTLMIKKELEKDPALAGEDWSRFLPHFKKKNVARKKPHKVNKKKEYTPFPPPQSESKVDKQLESGEYFLNDKQRKVK 855
K K+++ KPWDH GI+HW E +T D+ G LLEESSFATLFPKYREKYLREVWP VTRAL++VG++CEL+LVEGSM+V TTRKT DPY I+KARDLIKLLARS+PA QAL+IL+DD+QCDI+K GMVRSKE+FVKRRQRL+GP+G+TLKALELL+GCYILVQGNTVA MG + GLK AR+V+ + M+N+HPVY++K LMIK+EL KDPA+A E+W RFLP FKK+NV R+KPH V +KK YTPFPPPQ SKVD QLESGEYFL++ R+ +
Sbjct: 23 KQKGKHKKDKPWDHEGIDHWSIEPFTKDDNPGGLLEESSFATLFPKYREKYLREVWPAVTRALKEVGVACELNLVEGSMTVRTTRKTWDPYAIIKARDLIKLLARSVPAPQALKILQDDMQCDIVKTAGMVRSKEKFVKRRQRLIGPNGSTLKALELLTGCYILVQGNTVAVMGPFKGLKVARRVIEDAMRNIHPVYHVKALMIKRELAKDPAMAEENWDRFLPKFKKRNVPRRKPHVVREKKAYTPFPPPQQPSKVDLQLESGEYFLSEAAREAR 298
BLAST of mRNA_C-australica_Contig_977.4.1 vs. uniprot
Match:
A0A7S0GJJ8_9STRA (KRR-R motif-containing protein 1 n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GJJ8_9STRA)
HSP 1 Score: 403 bits (1035), Expect = 1.530e-129
Identity = 209/304 (68.75%), Postives = 243/304 (79.93%), Query Frame = 1
Query: 28 KNHNKYRRAKPWDHAGINHWE--QEKWTG--DEMCGT-LLEESSFATLFPKYREKYLREVWPIVTRALEKVGISCELDLVEGSMSVCTTRKTRDPYIIVKARDLIKLLARSIPAAQALRILEDDIQCDIIKIGGMVRSKERFVKRRQRLLGPDGATLKALELLSGCYILVQGNTVACMGSYAGLKSARKVVVECMQNVHPVYNIKTLMIKKELEKDPALAGEDWSRFLPHFKKKNVARKKPHKV-------NKKKEYTPFPPPQSESKVDKQLESGEYFLNDKQRKVKAQAQRRAAAAEKQRMK 903
KNHNKYRR KPWD+ INHW+ W D + G LLEESSFATLFPKYRE YLRE+WPIVTR+LEK I+CEL+LVEGSM+V TTRKT DPYI++KARDLIKLLARSIPA QAL+IL D+I DIIKIGG+VRSKERFVKRRQRL+GPDGATLKALELL+GCYILVQGNTV+ MGSY G+K AR V++ECM+N+HPVYNIK LMI++EL KDP L EDWSRFLP F KKNV RKKP +V KK YTPFPP Q+ SK+DKQL+SGEYFL +++R+ K A++ + K R K
Sbjct: 25 KNHNKYRREKPWDNETINHWDPAHSVWNPETDVLPGAQLLEESSFATLFPKYRETYLREIWPIVTRSLEKHKIACELNLVEGSMTVLTTRKTSDPYIVLKARDLIKLLARSIPAGQALKILNDEINADIIKIGGIVRSKERFVKRRQRLIGPDGATLKALELLTGCYILVQGNTVSVMGSYKGIKQARSVILECMRNIHPVYNIKRLMIQRELAKDPKLQDEDWSRFLPTFGKKNVPRKKPRQVLQDAEKPKSKKSYTPFPPAQTPSKIDKQLDSGEYFLTERERQAKQLAEKATVSIVKSRAK 328
BLAST of mRNA_C-australica_Contig_977.4.1 vs. uniprot
Match:
A0A485KS03_9STRA (KRR1 small subunit processome component n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KS03_9STRA)
HSP 1 Score: 399 bits (1026), Expect = 4.420e-129
Identity = 190/287 (66.20%), Postives = 238/287 (82.93%), Query Frame = 1
Query: 28 KNHNKYRRAKPWDHAGINHWEQEKWTGDEMCGTLLEESSFATLFPKYREKYLREVWPIVTRALEKVGISCELDLVEGSMSVCTTRKTRDPYIIVKARDLIKLLARSIPAAQALRILEDDIQCDIIKIGGMVRSKERFVKRRQRLLGPDGATLKALELLSGCYILVQGNTVACMGSYAGLKSARKVVVECMQNVHPVYNIKTLMIKKELEKDPALAGEDWSRFLPHFKKKNVARKKPHKVNKKKEYTPFPPPQSESKVDKQLESGEYFLNDKQRKVKAQAQRRAAAAE 888
K ++R+ KPWD + HW+ E W D+ +LEESSFATLFPKYREKYLREVWPIVT+AL+ V + CEL+L+EGSM+V TTRKT DPY+I+KARDLIKLLARSIP QA+++L+DD+QCDIIKIGG+VR+KERFVKRRQRL+GPDGATLKA+ELL+ CY+LVQGNTV+ MG YAGL+ R +V +C +NVHP+YNIKTLMIK+EL+KDP L GE+W RFLP FKKKNVA KKPH V +K+ YTPFPP SK+DK++ESGEYF+ +++RK +A++ AA A+
Sbjct: 15 KGKKQHRKDKPWDTDDVAHWKIESWKDDDNKSGMLEESSFATLFPKYREKYLREVWPIVTKALDNVKLVCELNLIEGSMTVRTTRKTSDPYVILKARDLIKLLARSIPVNQAIKVLDDDVQCDIIKIGGLVRNKERFVKRRQRLVGPDGATLKAIELLTNCYVLVQGNTVSAMGPYAGLRHVRSIVEDCFKNVHPIYNIKTLMIKRELQKDPKLQGENWDRFLPVFKKKNVATKKPHVVREKRVYTPFPPAPVPSKIDKEIESGEYFMKEQERKAMKKAEKAAANAD 301
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_977.4.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.80e-146 / Id = 76.95 Expect = 2.21e-134 / Id = 71.53 Expect = 2.70e-133 / Id = 69.44 Expect = 2.55e-131 / Id = 72.50 Expect = 5.06e-131 / Id = 71.79 Expect = 1.22e-130 / Id = 68.26 Expect = 1.37e-130 / Id = 68.95 Expect = 3.67e-130 / Id = 70.65 Expect = 1.53e-129 / Id = 68.75 Expect = 4.42e-129 / Id = 66.20 Sequence A0A836CN64_9STRA A0A7S2DCQ6_9STRA A0A7S1UII9_9STRA A0A7S3PWU0_9STRA A0A7R9YG52_9STRA B8C0X8_THAPS A0A024TMB1_9STRA A0A2V0NQC2_9CHLO A0A7S0GJJ8_9STRA A0A485KS03_9STRA
Pages
back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_977.4.1
>prot_C-australica_Contig_977.4.1 ID=prot_C-australica_Contig_977.4.1|Name=mRNA_C-australica_Contig_977.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=368bp
MSGGGGGKNHNKYRRAKPWDHAGINHWEQEKWTGDEMCGTLLEESSFATL FPKYREKYLREVWPIVTRALEKVGISCELDLVEGSMSVCTTRKTRDPYII VKARDLIKLLARSIPAAQALRILEDDIQCDIIKIGGMVRSKERFVKRRQR LLGPDGATLKALELLSGCYILVQGNTVACMGSYAGLKSARKVVVECMQNV HPVYNIKTLMIKKELEKDPALAGEDWSRFLPHFKKKNVARKKPHKVNKKK EYTPFPPPQSESKVDKQLESGEYFLNDKQRKVKAQAQRRAAAAEKQRMKT VASAGDGALSEKSDPKTYSPARVREDASTHTTASVARKLAGRKAKRVAEE DLSMSQFVHSKRPKKAK* back to top mRNA from alignment at C-australica_Contig_977:7238..10910+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_977.4.1 ID=mRNA_C-australica_Contig_977.4.1|Name=mRNA_C-australica_Contig_977.4.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3673bp|location=Sequence derived from alignment at C-australica_Contig_977:7238..10910+ (Chrysoparadoxa australica CS_1217)GGTGCC ATGAGCGGAGGAGGCGGGGGCAAGAATCACAACAAGTACAGGCG
GGCGAAGCCCTGGGACCACGCAGGTATTAACCACTGGGAGCAAGAGAAAT
GGACTGGGGATGAAATGTGTGGGACACTATTGGAAGAGAGTAGCTTTGCG
ACACTCTTTCCCAAG GTGAGATGATGGCCTAATTACTATTGGTCCTTCCA
CTCACAAAACGCTCTCTTTTTGGGCCTAGTATCGAGAGAAGTATTTGAGG
GAGGTGTGGCCCATTGTGACAAGGGCATTAGAG GTGAGCAATGCCAACCA
CAGTGTGGTGGCTGGGCATGTACTCTAGCTTACGCCTCGCTTGCCAACAG
AAAGTGGGTATCTCCTGTGAGCTGGACTTGGTGGAAGGGTCCATGTCAGT
TTGCACGACTCGCAAAACTCGCGATCCATATATCATTGTCAAAGCTAGGG
ACCTTATCAAGCTTCTCGCACGAAGCATTCCGGCCGCGCAAGCACTGCGC
ATTCTGGAAGATGACATTCAG GTATTATTTGGTTTGTTGACTGGTGCACG
CCCTTTTCCGCTAAGCTTACGGTGGATCCAACATCATACATATCATTGAC
ACCTGTCCTGAATCTATGCTTGCAGTGTGACATAATAAACTAAGCTTACG
GTGGATCCAACATCATGTATATCATTGACACCCTCTCCTGAATCTATGCT
TGCAGTGTGACATAATAAACTGAGCTTACGGTGGATCCAACATCATACAT
ATCATTGACACCCTGTCCTGAATCTATGCTTGCAGTGTGACATAATAAAG
ATTGGCGGCATGGTGCGCAGCAAGGAGAGGTTTGTCAAGAGGCGGCAGCG
GTTGTTGGGGCCCGATGGTGCCACCCTTAAAGCCCTGGAGCTGCTCAGTG
GTTGCTACATCCTTGTACAAGGCAATACTGTGGCATGCATGGGAAGCTAT
GCAGGGCTTAAATCAGCTCGCAAG GTCTGAAGAATACCTGAGGTTTCCTT
GGGTGACTTGCCCTGGAGAAGGCGCCGTGCATGTTGGACTGACTATCCTG
GCCTTGCGTGACCTCCCTCTCCCTGCTCACGCTCATGATCCATAGGTGGT
AGTGGAATGCATGCAGAATGTTCACCCTGTGTACAACATTAAAACCTTGA
TGATAAAGAAGGAGCTTGAGAAGGACCCAGCTCTAGCAGGAGAGGACTGG
AGCAGGTTCCTGCCACACTTCAAGAAGAAGAATGTTGCACGAAAGAAACC
GCACAAG GTGAGCAATGGGGTCCACTTTTCCCTGCAAGCTCTCTTCTCCC
CTTGAGGCTTGCATATCGTTACTTGGCAGCCTATGGCTCGCACCTAGGGC
TATCTAAGCCGCACCTCCATGGACTACTGTTCTGTCACATCTGACAAGGG
CCAAGATGCTACTCATCTTGATGGATTCGTGCTTGTTTTCTAGATGCCTT
AAATTCATAATAACGGCCTTCTCTTATCCCCATTCAGGTGAACAAAAAGA
AGGAGTATACTCCCTTCCCCCCGCCACAGAGTGAGAGCAAAGTGGATAAG
CAACTGGAAAGTGGAGAGTACTTCCTGAACGATAAGCAGCGCAAG GTACA
CGCAGGCCCCGCCCCATTGCCCCACAGCCTTCATCAAAGCTTACCTGCGT
AGCGCCAACTATCATCTAATACCCTTGACGCAACTGCTTCCCTTGTGCTG
CGATTGACGTCCTTGTACGCTTAGGTGAAAGCTCAGGCTCAGAGGCGGGC
GGCGGCTGCTGAAAAGCAACGAATGAAGACAGTAGCAAGTGCTGGTGATG
GTGCCCTCAGTGAGAAGAGCGACCCGAAAACATACAGCCCGGCTAGAGTT
CGTGAGGATGCCAGCACCCATACCACTGCTTCCGTTGCTCGGAAGCTTGC
TGGCAGAAAAGCCAAGAGGGTAGCAGAGGAAGATCTCAGTATGAGCCAGT
TTGTGCACAGCAAGCGACCAAAGAAGGCAAAGTGA GAAAAAAAATCCAGT
GGTGGACTGCTCCGTCGCAATTCAGAATCATTTGGGCTGAAACCTTACAG
AAACTGCTTTGCACTACTTCTGTGGTTCTGGCGGCTATGCCCGCGCTCTC
CTATCAGCTAAGGGATTTTGCACGCCAATCAAGTCCCTCTAATGGGACGT
AACCTCCTTGGAAAGCACTGTCCTCCTCTTCCTGCCGCCGCCTCTTGCGA
CTCTGTAGCAAGTTTGTTATTTCGCCCACTGCACTATCTTTGGGCGCCTC
CCCAACAGCCACATGCCTAAGCTCCGCAGCAGCCGATGAGGCAGCAGCAG
GCTGTTGGATTGTTGCCAACTTCGCCTCTGCCGCTGCAGGCAATGTAGAA
ACAACAGCTGCAGGAGTAGCAGTGACAAAAAGAGTGACGGTGGCGTTTCA
GTGCACATTTGAGGCCTTGAGGCCAGCTTCTACTCTGGGCAGCCCCCCCT
GTTTGCACCTGGCAGTCATTCACCATATGCCTCCTCCCATACACCGACCA
CACTGAGAAAAGATAACTCGCTTGCTCTCATTTATCCTGGAGAGTCGTGC
TTGAAAGAGCGAAGGTAAATGGTCCATCTCACCTCTTGAGCCACCCTTGC
TAGCTTTCCTCCTCTCGGAATGTTGCACCAGTTCTGCAAAGCGGCCCATG
TACGTAAGCTGCTCCAACTGCTCTC GCTCCTCCTGAAACAAGCATTCAAG
GAGAACGTGGCATGAGCTTGTGGGGCTCACCACGCAATATATGGCATGTG
GGGCAAATGTCCCAAAAGCAGAGCAAACCCCCTTGTTCAATCTGATACTT
AAGAGACAACTAACTTGCAGCTTGGTGTCCATCTCTATTGCCTCGTCCCC
CACTTCCTCTTCAGCTTCGTCCTTATTAACTTTGGCAGCAAATGTTTGAA
ACTCCCCCCAATCA GCCTATACAAATTGAGGTGGAAGGCGTGAGATATGA
ATCAACTATGGCTTGCCAAGAGCCATAAAGGAGTGATGAGCTTCATCGAG
CCTCATGAGGGGAGTCGCACTGCAATCTAGCCAAGGCAATTGCTATTGAG
GATCTGTTCCGCACAAAAAAAAAAAAACAAGCACAAGGCGCAAAAGATGA
CCTGCTGCTCAGGAGTAAGCTTCTTTCGCTTCTCCTTGGGAGCCTGAGGG
GCTAAGCCAAGCAAGGTGTGCAGTGGAGTCAAGTTATGGCACAGTTGGTG
TGTGTTTGAGATGCTCAGTGAGATAGGTTGTTAAAGAGTAAATGGGCCAT
CAGGAGATGGGAAAGAAAGAAAGAGGAAAGATTAAACAGTGTTCAATTCA
AGGTCTTACTGCTGCTGCTAAGTCTCAGAGAATGAATCACTTCGGTAAGG
CATGGTTTTCAACGTATCCAGCAGTGGGTAGTGAGTGAGCAACAAAGGGT
GGTGATCCTAGTGGTAAGCAAGAGGTTATAGGAAAAGGCAAATTGCAGGG
AATTCAGCAGTTGGTCGGTGAACAGGAGTGATGATTCTGGGTTAATGATA
GATAGGAGGGTCCATGGTACGGGTGTTCTTCCAGTGTGAGGAAACAAAAA
AGAAATGATGAATGAGAGAATAGGGGGAGACCTGATTTTGTGGGCGCGTC
GAAGAAGTCAGCAGGAAGGGTGCCCTCTGCACTGATTGTACCACCTTCCT
GCTCAAGCCCTTGCTCCTGCCAT back to top Coding sequence (CDS) from alignment at C-australica_Contig_977:7238..10910+
>mRNA_C-australica_Contig_977.4.1 ID=mRNA_C-australica_Contig_977.4.1|Name=mRNA_C-australica_Contig_977.4.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1104bp|location=Sequence derived from alignment at C-australica_Contig_977:7238..10910+ (Chrysoparadoxa australica CS_1217) ATGAGCGGAGGAGGCGGGGGCAAGAATCACAACAAGTACAGGCGGGCGAA GCCCTGGGACCACGCAGGTATTAACCACTGGGAGCAAGAGAAATGGACTG GGGATGAAATGTGTGGGACACTATTGGAAGAGAGTAGCTTTGCGACACTC TTTCCCAAGTATCGAGAGAAGTATTTGAGGGAGGTGTGGCCCATTGTGAC AAGGGCATTAGAGAAAGTGGGTATCTCCTGTGAGCTGGACTTGGTGGAAG GGTCCATGTCAGTTTGCACGACTCGCAAAACTCGCGATCCATATATCATT GTCAAAGCTAGGGACCTTATCAAGCTTCTCGCACGAAGCATTCCGGCCGC GCAAGCACTGCGCATTCTGGAAGATGACATTCAGTGTGACATAATAAAGA TTGGCGGCATGGTGCGCAGCAAGGAGAGGTTTGTCAAGAGGCGGCAGCGG TTGTTGGGGCCCGATGGTGCCACCCTTAAAGCCCTGGAGCTGCTCAGTGG TTGCTACATCCTTGTACAAGGCAATACTGTGGCATGCATGGGAAGCTATG CAGGGCTTAAATCAGCTCGCAAGGTGGTAGTGGAATGCATGCAGAATGTT CACCCTGTGTACAACATTAAAACCTTGATGATAAAGAAGGAGCTTGAGAA GGACCCAGCTCTAGCAGGAGAGGACTGGAGCAGGTTCCTGCCACACTTCA AGAAGAAGAATGTTGCACGAAAGAAACCGCACAAGGTGAACAAAAAGAAG GAGTATACTCCCTTCCCCCCGCCACAGAGTGAGAGCAAAGTGGATAAGCA ACTGGAAAGTGGAGAGTACTTCCTGAACGATAAGCAGCGCAAGGTGAAAG CTCAGGCTCAGAGGCGGGCGGCGGCTGCTGAAAAGCAACGAATGAAGACA GTAGCAAGTGCTGGTGATGGTGCCCTCAGTGAGAAGAGCGACCCGAAAAC ATACAGCCCGGCTAGAGTTCGTGAGGATGCCAGCACCCATACCACTGCTT CCGTTGCTCGGAAGCTTGCTGGCAGAAAAGCCAAGAGGGTAGCAGAGGAA GATCTCAGTATGAGCCAGTTTGTGCACAGCAAGCGACCAAAGAAGGCAAA GTGA back to top