Homology
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match:
UPI000399FF7F (OmpA family protein n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI000399FF7F)
HSP 1 Score: 120 bits (300), Expect = 9.370e-31
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1
Query: 1 YNMQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVELTLSYN 180
YNMQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVELTLSYN
Sbjct: 388 YNMQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVELTLSYN 447
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match:
A0A2D4ZRJ8_9BACT (Cell envelope biogenesis protein OmpA n=3 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A2D4ZRJ8_9BACT)
HSP 1 Score: 98.2 bits (243), Expect = 1.290e-22
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 1
Query: 1 YNMQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVELTLSYN 180
YNM+LS +RA +VK YLV KGI SSRI TEGYGETKPIASN SKDGKTRNRRVEL LSYN
Sbjct: 405 YNMKLSKERAQSVKSYLVHKGISSSRITTEGYGETKPIASNASKDGKTRNRRVELKLSYN 464
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match:
UPI0003048956 (OmpA family protein n=1 Tax=Pedobacter arcticus TaxID=752140 RepID=UPI0003048956)
HSP 1 Score: 83.2 bits (204), Expect = 3.300e-17
Identity = 37/55 (67.27%), Postives = 48/55 (87.27%), Query Frame = 1
Query: 1 YNMQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVEL 165
YNMQLS+DRANAVK YLV+ G+D+ +I T+GYGET+PIASNT+++G+ NRRVE
Sbjct: 426 YNMQLSLDRANAVKTYLVNSGVDAKKIATKGYGETRPIASNTTEEGRVANRRVEF 480
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match:
A0A0B8YFD2_9SPHI (Outer membrane porin F n=5 Tax=Pedobacter TaxID=84567 RepID=A0A0B8YFD2_9SPHI)
HSP 1 Score: 82.8 bits (203), Expect = 4.520e-17
Identity = 36/55 (65.45%), Postives = 48/55 (87.27%), Query Frame = 1
Query: 1 YNMQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVEL 165
YNMQLS+DRANAVK YLV+ G+D+ RI T+GYGE++PIASN +++G+ +NRRVE
Sbjct: 426 YNMQLSVDRANAVKTYLVNSGVDAKRISTKGYGESRPIASNATEEGRVKNRRVEF 480
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match:
A0A4U1C5L7_9SPHI (OmpA family protein n=1 Tax=Pedobacter cryophilus TaxID=2571271 RepID=A0A4U1C5L7_9SPHI)
HSP 1 Score: 82.4 bits (202), Expect = 6.180e-17
Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 1
Query: 1 YNMQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVEL 165
YNMQLSIDRANAVK YLV+ G+D+ R+ T+GYGET+PIASN +++G+ NRRVE
Sbjct: 424 YNMQLSIDRANAVKTYLVNSGVDAKRVMTKGYGETRPIASNATEEGRVANRRVEF 478
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match:
UPI00190CCFB5 (OmpA family protein n=1 Tax=Pedobacter segetis TaxID=2793069 RepID=UPI00190CCFB5)
HSP 1 Score: 82.4 bits (202), Expect = 6.190e-17
Identity = 38/55 (69.09%), Postives = 47/55 (85.45%), Query Frame = 1
Query: 1 YNMQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVEL 165
YNMQLSIDRANAVK YLV+ G+D+ RI T+GYGET+PIASN +++G+ NRRVE
Sbjct: 425 YNMQLSIDRANAVKTYLVNSGVDAKRIATKGYGETRPIASNATEEGRELNRRVEF 479
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match:
A0A419S8H7_9SPHI (Flagellar motor protein MotB n=1 Tax=Pelobium manganitolerans TaxID=1842495 RepID=A0A419S8H7_9SPHI)
HSP 1 Score: 82.0 bits (201), Expect = 8.500e-17
Identity = 36/55 (65.45%), Postives = 47/55 (85.45%), Query Frame = 1
Query: 1 YNMQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVEL 165
YNMQLSIDRANAVK YLV+ G+D+ ++ T+GYGET+PIASN +++G+ NRRVE
Sbjct: 427 YNMQLSIDRANAVKTYLVNSGVDAKKVSTKGYGETRPIASNATEEGRVANRRVEF 481
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match:
UPI0019ADF8E2 (OmpA family protein n=1 Tax=Pseudopedobacter sp. TaxID=1936787 RepID=UPI0019ADF8E2)
HSP 1 Score: 81.6 bits (200), Expect = 1.170e-16
Identity = 37/55 (67.27%), Postives = 47/55 (85.45%), Query Frame = 1
Query: 1 YNMQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVEL 165
YNMQLSIDRANAVK YLV+ G+D+ +I T+GYGET+PIASN +++G+ NRRVE
Sbjct: 429 YNMQLSIDRANAVKTYLVNSGVDAKKIATKGYGETRPIASNATEEGRIANRRVEF 483
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match:
UPI001991B4E1 (OmpA family protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=UPI001991B4E1)
HSP 1 Score: 75.1 bits (183), Expect = 1.410e-16
Identity = 33/59 (55.93%), Postives = 47/59 (79.66%), Query Frame = 1
Query: 4 NMQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVELTLSYN 180
N++LS DRA+AVK YL+SKG+ SR+ +GYGE+KP++SN +++GK NRRVE T+ N
Sbjct: 10 NLKLSSDRADAVKAYLISKGVSDSRVTAKGYGESKPLSSNDTEEGKQNNRRVEFTILKN 68
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match:
A0A1F4C4V5_9PROT (OmpA-like domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_64_23 TaxID=1797499 RepID=A0A1F4C4V5_9PROT)
HSP 1 Score: 78.6 bits (192), Expect = 2.120e-16
Identity = 35/57 (61.40%), Postives = 49/57 (85.96%), Query Frame = 1
Query: 1 YNMQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVELTL 171
YN +LS+ RAN+VK YLVSKGI+++RI TEG GET+P++SN +KDG+ +NRRVE+ +
Sbjct: 159 YNQKLSVRRANSVKNYLVSKGIEANRIYTEGKGETQPVSSNKTKDGRAKNRRVEIEV 215
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 9.37e-31 / Id = 100.00 Expect = 1.29e-22 / Id = 81.67 Expect = 3.30e-17 / Id = 67.27 Expect = 4.52e-17 / Id = 65.45 Expect = 6.18e-17 / Id = 67.27 Expect = 6.19e-17 / Id = 69.09 Expect = 8.50e-17 / Id = 65.45 Expect = 1.17e-16 / Id = 67.27 Expect = 1.41e-16 / Id = 55.93 Expect = 2.12e-16 / Id = 61.40 Sequence UPI000399FF7F A0A2D4ZRJ8_9BACT UPI0003048956 A0A0B8YFD2_9SPHI A0A4U1C5L7_9SPHI UPI00190CCFB5 A0A419S8H7_9SPHI UPI0019ADF8E2 UPI001991B4E1 A0A1F4C4V5_9PROT
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10341.2.1
>prot_C-australica_Contig_10341.2.1 ID=prot_C-australica_Contig_10341.2.1|Name=mRNA_C-australica_Contig_10341.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=59bp
MQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRR VELTLSYN* back to top mRNA from alignment at C-australica_Contig_10341:643..825-
Legend: UTR CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10341.2.1 ID=mRNA_C-australica_Contig_10341.2.1|Name=mRNA_C-australica_Contig_10341.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=183bp|location=Sequence derived from alignment at C-australica_Contig_10341:643..825- (Chrysoparadoxa australica CS_1217)TATAAC ATGCAACTGTCTATTGATAGAGCTAATGCGGTAAAGCAATACCT
TGTATCAAAAGGAATTGATTCTTCGCGCATTGAAACTGAAGGATATGGCG
AAACGAAGCCTATTGCCTCTAATACCTCAAAAGATGGTAAAACGAGGAAC
CGTAGAGTTGAATTAACTTTGAGTTATAATTAA back to top Coding sequence (CDS) from alignment at C-australica_Contig_10341:643..825-
>mRNA_C-australica_Contig_10341.2.1 ID=mRNA_C-australica_Contig_10341.2.1|Name=mRNA_C-australica_Contig_10341.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=177bp|location=Sequence derived from alignment at C-australica_Contig_10341:643..825- (Chrysoparadoxa australica CS_1217) ATGCAACTGTCTATTGATAGAGCTAATGCGGTAAAGCAATACCTTGTATC AAAAGGAATTGATTCTTCGCGCATTGAAACTGAAGGATATGGCGAAACGA AGCCTATTGCCTCTAATACCTCAAAAGATGGTAAAACGAGGAACCGTAGA GTTGAATTAACTTTGAGTTATAATTAA back to top