prot_C-australica_Contig_10341.2.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_10341.2.1
Unique Nameprot_C-australica_Contig_10341.2.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length59
Homology
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match: UPI000399FF7F (OmpA family protein n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI000399FF7F)

HSP 1 Score: 114 bits (286), Expect = 8.740e-29
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0
Query:    1 MQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVELTLSYN 58
            MQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVELTLSYN
Sbjct:  390 MQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVELTLSYN 447          
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match: A0A2D4ZRJ8_9BACT (Cell envelope biogenesis protein OmpA n=3 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A2D4ZRJ8_9BACT)

HSP 1 Score: 92.8 bits (229), Expect = 1.050e-20
Identity = 47/58 (81.03%), Postives = 50/58 (86.21%), Query Frame = 0
Query:    1 MQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVELTLSYN 58
            M+LS +RA +VK YLV KGI SSRI TEGYGETKPIASN SKDGKTRNRRVEL LSYN
Sbjct:  407 MKLSKERAQSVKSYLVHKGISSSRITTEGYGETKPIASNASKDGKTRNRRVELKLSYN 464          
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match: UPI001991B4E1 (OmpA family protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=UPI001991B4E1)

HSP 1 Score: 72.4 bits (176), Expect = 1.510e-15
Identity = 32/58 (55.17%), Postives = 46/58 (79.31%), Query Frame = 0
Query:    1 MQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVELTLSYN 58
            ++LS DRA+AVK YL+SKG+  SR+  +GYGE+KP++SN +++GK  NRRVE T+  N
Sbjct:   11 LKLSSDRADAVKAYLISKGVSDSRVTAKGYGESKPLSSNDTEEGKQNNRRVEFTILKN 68          
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match: UPI0003048956 (OmpA family protein n=1 Tax=Pedobacter arcticus TaxID=752140 RepID=UPI0003048956)

HSP 1 Score: 77.8 bits (190), Expect = 2.460e-15
Identity = 35/53 (66.04%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 MQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVEL 53
            MQLS+DRANAVK YLV+ G+D+ +I T+GYGET+PIASNT+++G+  NRRVE 
Sbjct:  428 MQLSLDRANAVKTYLVNSGVDAKKIATKGYGETRPIASNTTEEGRVANRRVEF 480          
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match: A0A258JT54_9FLAO (Cell envelope biogenesis protein OmpA (Fragment) n=1 Tax=Flavobacteriales bacterium 32-34-25 TaxID=1970508 RepID=A0A258JT54_9FLAO)

HSP 1 Score: 72.8 bits (177), Expect = 2.630e-15
Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 MQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVELTL 55
            +QLS DRA AVK YL+SKGI +SR+ +EGYG TKPIASN + +G+ +NRRVE+ L
Sbjct:   47 LQLSKDRAAAVKDYLISKGISASRLSSEGYGITKPIASNKTVEGRAQNRRVEIIL 101          
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match: A0A0B8YFD2_9SPHI (Outer membrane porin F n=5 Tax=Pedobacter TaxID=84567 RepID=A0A0B8YFD2_9SPHI)

HSP 1 Score: 77.4 bits (189), Expect = 3.370e-15
Identity = 34/53 (64.15%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 MQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVEL 53
            MQLS+DRANAVK YLV+ G+D+ RI T+GYGE++PIASN +++G+ +NRRVE 
Sbjct:  428 MQLSVDRANAVKTYLVNSGVDAKRISTKGYGESRPIASNATEEGRVKNRRVEF 480          
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match: A0A4U1C5L7_9SPHI (OmpA family protein n=1 Tax=Pedobacter cryophilus TaxID=2571271 RepID=A0A4U1C5L7_9SPHI)

HSP 1 Score: 77.0 bits (188), Expect = 4.610e-15
Identity = 35/53 (66.04%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 MQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVEL 53
            MQLSIDRANAVK YLV+ G+D+ R+ T+GYGET+PIASN +++G+  NRRVE 
Sbjct:  426 MQLSIDRANAVKTYLVNSGVDAKRVMTKGYGETRPIASNATEEGRVANRRVEF 478          
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match: UPI00190CCFB5 (OmpA family protein n=1 Tax=Pedobacter segetis TaxID=2793069 RepID=UPI00190CCFB5)

HSP 1 Score: 77.0 bits (188), Expect = 4.610e-15
Identity = 36/53 (67.92%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 MQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVEL 53
            MQLSIDRANAVK YLV+ G+D+ RI T+GYGET+PIASN +++G+  NRRVE 
Sbjct:  427 MQLSIDRANAVKTYLVNSGVDAKRIATKGYGETRPIASNATEEGRELNRRVEF 479          
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match: A0A419S8H7_9SPHI (Flagellar motor protein MotB n=1 Tax=Pelobium manganitolerans TaxID=1842495 RepID=A0A419S8H7_9SPHI)

HSP 1 Score: 76.6 bits (187), Expect = 6.310e-15
Identity = 34/53 (64.15%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 MQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVEL 53
            MQLSIDRANAVK YLV+ G+D+ ++ T+GYGET+PIASN +++G+  NRRVE 
Sbjct:  429 MQLSIDRANAVKTYLVNSGVDAKKVSTKGYGETRPIASNATEEGRVANRRVEF 481          
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Match: A0A2U2PLL6_9SPHI (OmpA family protein n=1 Tax=Pararcticibacter amylolyticus TaxID=2173175 RepID=A0A2U2PLL6_9SPHI)

HSP 1 Score: 73.6 bits (179), Expect = 7.300e-15
Identity = 33/55 (60.00%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 MQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRRVELTL 55
            M LS+DRANAVK YLV+ GID++ +  +G+GETKPIASN++++G+  NRRVE+ L
Sbjct:  121 MSLSVDRANAVKTYLVNAGIDAANLSVKGFGETKPIASNSNEEGRALNRRVEIQL 175          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10341.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000399FF7F8.740e-29100.00OmpA family protein n=1 Tax=Balneola vulgaris TaxI... [more]
A0A2D4ZRJ8_9BACT1.050e-2081.03Cell envelope biogenesis protein OmpA n=3 Tax=Bact... [more]
UPI001991B4E11.510e-1555.17OmpA family protein n=1 Tax=Cytophagales bacterium... [more]
UPI00030489562.460e-1566.04OmpA family protein n=1 Tax=Pedobacter arcticus Ta... [more]
A0A258JT54_9FLAO2.630e-1563.64Cell envelope biogenesis protein OmpA (Fragment) n... [more]
A0A0B8YFD2_9SPHI3.370e-1564.15Outer membrane porin F n=5 Tax=Pedobacter TaxID=84... [more]
A0A4U1C5L7_9SPHI4.610e-1566.04OmpA family protein n=1 Tax=Pedobacter cryophilus ... [more]
UPI00190CCFB54.610e-1567.92OmpA family protein n=1 Tax=Pedobacter segetis Tax... [more]
A0A419S8H7_9SPHI6.310e-1564.15Flagellar motor protein MotB n=1 Tax=Pelobium mang... [more]
A0A2U2PLL6_9SPHI7.300e-1560.00OmpA family protein n=1 Tax=Pararcticibacter amylo... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01023NAFLGMOTYcoord: 18..37
score: 45.0
coord: 38..58
score: 40.48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..58
NoneNo IPR availablePANTHERPTHR30128OUTER MEMBRANE PROTEIN, OMPA-RELATEDcoord: 3..55
NoneNo IPR availablePANTHERPTHR30128:SF57BLR1084 PROTEINcoord: 3..55
IPR006665OmpA-like domainPFAMPF00691OmpAcoord: 1..49
e-value: 1.3E-13
score: 51.1
IPR006665OmpA-like domainPROSITEPS51123OMPA_2coord: 1..58
score: 32.223099
IPR006665OmpA-like domainCDDcd07185OmpA_C-likecoord: 1..55
e-value: 4.41792E-26
score: 89.1494
IPR036737OmpA-like domain superfamilyGENE3D3.30.1330.60coord: 1..57
e-value: 1.1E-22
score: 82.3
IPR036737OmpA-like domain superfamilySUPERFAMILY103088OmpA-likecoord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10341contigC-australica_Contig_10341:643..819 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10341.2.1mRNA_C-australica_Contig_10341.2.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_10341 643..825 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_10341.2.1 ID=prot_C-australica_Contig_10341.2.1|Name=mRNA_C-australica_Contig_10341.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=59bp
MQLSIDRANAVKQYLVSKGIDSSRIETEGYGETKPIASNTSKDGKTRNRR
VELTLSYN*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006665OmpA-like
IPR036737OmpA-like_sf