Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 480 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 408 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586769.8404405-UTR-C-australica_Contig_1032:12009..12045 | 1682586769.8404405-UTR-C-australica_Contig_1032:12009..12045 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1032 12010..12045 + |
| 1682586769.8493404-UTR-C-australica_Contig_1032:12217..12252 | 1682586769.8493404-UTR-C-australica_Contig_1032:12217..12252 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1032 12218..12252 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586769.8581088-CDS-C-australica_Contig_1032:12252..12610 | 1682586769.8581088-CDS-C-australica_Contig_1032:12252..12610 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1032 12253..12610 + |
| 1682586769.8689663-CDS-C-australica_Contig_1032:12732..12782 | 1682586769.8689663-CDS-C-australica_Contig_1032:12732..12782 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1032 12733..12782 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1032.7.1 >prot_C-australica_Contig_1032.7.1 ID=prot_C-australica_Contig_1032.7.1|Name=mRNA_C-australica_Contig_1032.7.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=136bp
MEPGMGTPSWRQRIINRLSMGPAQDSQANPVSEAEGEGEAASGNEAEVDM
SKSEVADEAHSSEDEDNDREPTPGASEPDEAWNKEEEEEVDQESVEGNIG
SLNLLSPSQANEEHFESDQEAISFMEMPSHLPPRMT back to topmRNA from alignment at C-australica_Contig_1032:12010..12782+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_1032.7.1 ID=mRNA_C-australica_Contig_1032.7.1|Name=mRNA_C-australica_Contig_1032.7.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=773bp|location=Sequence derived from alignment at C-australica_Contig_1032:12010..12782+ (Chrysoparadoxa australica CS_1217)
GGCACAAGGGACAAAGGAGACAAGGGCAGGAATCGGGTACCGTAGGATTG
TAGTGGCTGGTTGGTAGGCAACAGTACAACAAGGAGAAAAAGGGCGCCGC
TCAGTTGCTCGTCTGGAAGCCACCGTCCAGGGCATGTAGATAGGCTGGGT
AGCGCTGTAGGATCGCTCTCATACCTCTATCCTCACCCTGCCCTTCTCTC
TCACCTAGGTTGGAGCTATTCCAGCTCGATAGCACAATAGAACATGGAGC
CGGGGATGGGGACTCCGTCTTGGAGGCAGCGCATCATAAACCGCCTCAGC
ATGGGACCGGCACAAGACAGCCAGGCTAATCCAGTGTCTGAAGCTGAAGG
TGAAGGTGAAGCCGCTTCCGGGAATGAAGCTGAAGTGGACATGTCCAAGT
CCGAAGTTGCAGATGAAGCACACAGCTCCGAGGATGAGGATAATGACAGA
GAGCCCACACCTGGGGCAAGTGAGCCCGACGAGGCATGGAACAAGGAGGA
AGAAGAGGAGGTGGATCAGGAAAGCGTTGAGGGCAATATAGGGTCACTTA
ATCTACTGTCACCATCCCAAGCTAATGAAGAGCACTTTGAGTCTGACCAA
GGTGAGCCCCTCTCCCAGCCGGTGCCAAAGATACATGATGCAGGCCCCCC
TGATCACCTAAGCCTCTTTCCTTAAACTCTCAACTCAGTCCCTTCTCCTT
GTCTTTATCATCCGTTCTGCCAGAGGCAATATCTTTCATGGAGATGCCAT
CACATTTACCCCCTCGAATGACG back to topCoding sequence (CDS) from alignment at C-australica_Contig_1032:12010..12782+ >mRNA_C-australica_Contig_1032.7.1 ID=mRNA_C-australica_Contig_1032.7.1|Name=mRNA_C-australica_Contig_1032.7.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=408bp|location=Sequence derived from alignment at C-australica_Contig_1032:12010..12782+ (Chrysoparadoxa australica CS_1217)
ATGGAGCCGGGGATGGGGACTCCGTCTTGGAGGCAGCGCATCATAAACCG
CCTCAGCATGGGACCGGCACAAGACAGCCAGGCTAATCCAGTGTCTGAAG
CTGAAGGTGAAGGTGAAGCCGCTTCCGGGAATGAAGCTGAAGTGGACATG
TCCAAGTCCGAAGTTGCAGATGAAGCACACAGCTCCGAGGATGAGGATAA
TGACAGAGAGCCCACACCTGGGGCAAGTGAGCCCGACGAGGCATGGAACA
AGGAGGAAGAAGAGGAGGTGGATCAGGAAAGCGTTGAGGGCAATATAGGG
TCACTTAATCTACTGTCACCATCCCAAGCTAATGAAGAGCACTTTGAGTC
TGACCAAGAGGCAATATCTTTCATGGAGATGCCATCACATTTACCCCCTC
GAATGACG back to top
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