Homology
BLAST of mRNA_C-australica_Contig_10263.2.1 vs. uniprot
Match:
A0A222E455_9RHOB (Histone deacetylase-like amidohydrolase n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E455_9RHOB)
HSP 1 Score: 332 bits (852), Expect = 4.230e-113
Identity = 167/174 (95.98%), Postives = 170/174 (97.70%), Query Frame = 1
Query: 1 FGNVAIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDEARTLFIGSHQMPLWPGTGGVEDRGGHDNVLNLPLXXXXXXSEMRSVWTPALSRIRAFQPELLIISAGFDAHQDDPLAQLEWNVDDFRWITRELCNLAADVCDGRVVSCLEGGYDLGALSTSGKAHVEILMEAGQ 522
FGNVAIAAK ALEAHGL+RVAVVDFDVHHGNGTQDLLWDEAR+LFIGSHQMPLWPGTGGVEDRG HDNVLNLP XXXXXXSEMRSVWTPALSRIR FQPELLIISAGFDAHQDDPLAQLEWNVDDFRWITRELC+LAADVCDGRVVSCLEGGYDLGALSTSGKAHVEILMEAGQ
Sbjct: 134 FGNVAIAAKLALEAHGLARVAVVDFDVHHGNGTQDLLWDEARSLFIGSHQMPLWPGTGGVEDRGEHDNVLNLPXXXXXXXSEMRSVWTPALSRIRDFQPELLIISAGFDAHQDDPLAQLEWNVDDFRWITRELCDLAADVCDGRVVSCLEGGYDLGALSTSGKAHVEILMEAGQ 307
BLAST of mRNA_C-australica_Contig_10263.2.1 vs. uniprot
Match:
A0A238K6D1_9RHOB (Histone deacetylase-like amidohydrolase n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238K6D1_9RHOB)
HSP 1 Score: 310 bits (794), Expect = 2.790e-104
Identity = 145/173 (83.82%), Postives = 157/173 (90.75%), Query Frame = 1
Query: 1 FGNVAIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDEARTLFIGSHQMPLWPGTGGVEDRGGHDNVLNLPLXXXXXXSEMRSVWTPALSRIRAFQPELLIISAGFDAHQDDPLAQLEWNVDDFRWITRELCNLAADVCDGRVVSCLEGGYDLGALSTSGKAHVEILMEAG 519
FGNVAIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLW+EARTLFIGSHQMPLWPGTG ++RG HDNVLNLPL +EMR+ W PA+SR+RAF+PELLIISAGFDAHQDDPLAQLEW+V+DFRWITRELC +A DVC GRVVSCLEGGYDL ALS SGKAHVE+LMEAG
Sbjct: 134 FGNVAIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWNEARTLFIGSHQMPLWPGTGRPDERGAHDNVLNLPLAPGSGGAEMRAAWAPAISRLRAFEPELLIISAGFDAHQDDPLAQLEWSVEDFRWITRELCKMARDVCGGRVVSCLEGGYDLAALSASGKAHVEVLMEAG 306
BLAST of mRNA_C-australica_Contig_10263.2.1 vs. uniprot
Match:
A0A0B3SEQ3_9RHOB (Acetylspermidine deacetylase, Deacetylase n=7 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A0B3SEQ3_9RHOB)
HSP 1 Score: 301 bits (770), Expect = 1.240e-100
Identity = 150/174 (86.21%), Postives = 157/174 (90.23%), Query Frame = 1
Query: 1 FGNVAIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDEARTLFIGSHQMPLWPGTGGVEDRGGHDNVLNLPLXXXXXXSEMRSVWTPALSRIRAFQPELLIISAGFDAHQDDPLAQLEWNVDDFRWITRELCNLAADVCDGRVVSCLEGGYDLGALSTSGKAHVEILMEAGQ 522
FGNVAIAAKHALE HGLSRVAVVDFDVHHGNGTQDLLWDEARTLFIGSHQMPLWPGTG E+RG HDNV NL XXXXXX + WTPALSR+RAF+PELLIISAGFDAHQDDPLAQLEW V+DFRWITRELC LAAD C GRVVSCLEGGYDLGALS SGKAHVE+LMEAG+
Sbjct: 134 FGNVAIAAKHALETHGLSRVAVVDFDVHHGNGTQDLLWDEARTLFIGSHQMPLWPGTGSAEERGAHDNVQNLXXXXXXXXXXXXAAWTPALSRMRAFRPELLIISAGFDAHQDDPLAQLEWTVEDFRWITRELCALAADECGGRVVSCLEGGYDLGALSGSGKAHVELLMEAGR 307
BLAST of mRNA_C-australica_Contig_10263.2.1 vs. uniprot
Match:
UPI001C95ED94 (histone deacetylase family protein n=3 Tax=Rhodobacterales TaxID=204455 RepID=UPI001C95ED94)
HSP 1 Score: 293 bits (749), Expect = 1.920e-97
Identity = 143/174 (82.18%), Postives = 154/174 (88.51%), Query Frame = 1
Query: 1 FGNVAIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDEARTLFIGSHQMPLWPGTGGVEDRGGHDNVLNLPLXXXXXXSEMRSVWTPALSRIRAFQPELLIISAGFDAHQDDPLAQLEWNVDDFRWITRELCNLAADVCDGRVVSCLEGGYDLGALSTSGKAHVEILMEAGQ 522
FGNVAIAAKHAL AHG RVAVVDFDVHHGNGTQDLLW+E+RTLFIGSHQMPLWPGTG ++RG HDNV NL XXXXXX MR+ W PA SR+RA+ P+LLIISAGFDAHQDDPLAQLEW+VDDFRWITR LC+LAAD C GRVVSCLEGGYDL ALS SGKAHVE+LMEAGQ
Sbjct: 134 FGNVAIAAKHALNAHGAERVAVVDFDVHHGNGTQDLLWNESRTLFIGSHQMPLWPGTGNADERGAHDNVQNLXXXXXXXXXXMRAAWGPAFSRLRAYNPDLLIISAGFDAHQDDPLAQLEWSVDDFRWITRALCDLAADTCGGRVVSCLEGGYDLAALSASGKAHVEVLMEAGQ 307
BLAST of mRNA_C-australica_Contig_10263.2.1 vs. uniprot
Match:
UPI0010A611A0 (histone deacetylase family protein n=1 Tax=Primorskyibacter sp. XY-301 TaxID=2562685 RepID=UPI0010A611A0)
HSP 1 Score: 285 bits (728), Expect = 2.960e-94
Identity = 127/174 (72.99%), Postives = 150/174 (86.21%), Query Frame = 1
Query: 1 FGNVAIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDEARTLFIGSHQMPLWPGTGGVEDRGGHDNVLNLPLXXXXXXSEMRSVWTPALSRIRAFQPELLIISAGFDAHQDDPLAQLEWNVDDFRWITRELCNLAADVCDGRVVSCLEGGYDLGALSTSGKAHVEILMEAGQ 522
FGN A+AAKH LE HGLSRVAV+DFDVHHGNGTQDLLW+E R+LFIGSHQMPLWPG+G +RG HDNVLNLPL +EMR+ WTPAL R+R++ PE++++SAGFDAHQDDPLAQL W+VDDFRWIT E+C +AADVC GRVVS LEGGYDLGAL+ S KAHV++L+EAG+
Sbjct: 134 FGNAALAAKHGLERHGLSRVAVLDFDVHHGNGTQDLLWNEPRSLFIGSHQMPLWPGSGDASERGAHDNVLNLPLAPETGGAEMRAAWTPALGRLRSYAPEMIVVSAGFDAHQDDPLAQLNWSVDDFRWITGEICTIAADVCAGRVVSVLEGGYDLGALAASAKAHVDVLLEAGK 307
BLAST of mRNA_C-australica_Contig_10263.2.1 vs. uniprot
Match:
X6L1L7_9RHOB (Acetoin utilization protein n=1 Tax=Rhodobacteraceae bacterium PD-2 TaxID=1169855 RepID=X6L1L7_9RHOB)
HSP 1 Score: 267 bits (683), Expect = 2.010e-87
Identity = 131/172 (76.16%), Postives = 146/172 (84.88%), Query Frame = 1
Query: 1 FGNVAIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDEARTLFIGSHQMPLWPGTGGVEDRGGHDNVLNLPLXXXXXXSEMRSVWTPALSRIRAFQPELLIISAGFDAHQDDPLAQLEWNVDDFRWITRELCNLAADVCDGRVVSCLEGGYDLGALSTSGKAHVEILMEA 516
FGN A+AAKHAL+ HGLSRVAV+DFDVHHGNGTQDLLWDEAR LFIGSHQMPLWPGTG ++RG HDNVLN XXXXXX W PALSR+RA +P L+I+SAGFDAHQDDPLA L W++DDFRWITR +C++AADVC GRVVS LEGGYDL ALS S +AHVEILMEA
Sbjct: 134 FGNAAMAAKHALDVHGLSRVAVLDFDVHHGNGTQDLLWDEARALFIGSHQMPLWPGTGRADERGAHDNVLNXXXXXXXXXXXXXXAWEPALSRLRACRPGLIIVSAGFDAHQDDPLAGLNWSLDDFRWITRAICDVAADVCGGRVVSTLEGGYDLAALSASARAHVEILMEA 305
BLAST of mRNA_C-australica_Contig_10263.2.1 vs. uniprot
Match:
UPI001ADF03E7 (histone deacetylase family protein n=1 Tax=Sagittula salina TaxID=2820268 RepID=UPI001ADF03E7)
HSP 1 Score: 265 bits (677), Expect = 1.680e-86
Identity = 127/174 (72.99%), Postives = 143/174 (82.18%), Query Frame = 1
Query: 1 FGNVAIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDEARTLFIGSHQMPLWPGTGGVEDRGGHDNVLNLPLXXXXXXSEMRSVW-TPALSRIRAFQPELLIISAGFDAHQDDPLAQLEWNVDDFRWITRELCNLAADVCDGRVVSCLEGGYDLGALSTSGKAHVEILMEAG 519
FG+ AIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDEAR L + S QMPLWPGTG E+RGGHDNV+NLPL +EMR+ + A R+RAF PEL+I+SAGFDAH+DDPLAQLEW V+DF WITRELC +A++ GRVVS LEGGYDL LS S KAHVE+LMEAG
Sbjct: 134 FGSAAIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDEARALLVSSQQMPLWPGTGTPEERGGHDNVMNLPLPPGSGGAEMRARYLNEAFPRLRAFSPELIIVSAGFDAHKDDPLAQLEWEVEDFVWITRELCAIASEAAGGRVVSTLEGGYDLAGLSASAKAHVEVLMEAG 307
BLAST of mRNA_C-australica_Contig_10263.2.1 vs. uniprot
Match:
A0A0P1G8Y4_9RHOB (Histone deacetylase-like amidohydrolase n=1 Tax=Tropicibacter naphthalenivorans TaxID=441103 RepID=A0A0P1G8Y4_9RHOB)
HSP 1 Score: 262 bits (669), Expect = 2.670e-85
Identity = 120/174 (68.97%), Postives = 141/174 (81.03%), Query Frame = 1
Query: 1 FGNVAIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDEARTLFIGSHQMPLWPGTGGVEDRGGHDNVLNLPLXXXXXXSEMRSVWTPALSRIRAFQPELLIISAGFDAHQDDPLAQLEWNVDDFRWITRELCNLAADVCDGRVVSCLEGGYDLGALSTSGKAHVEILMEAGQ 522
FG A+AAK+AL+ GLSRVAVVDFDVHHGNGTQDLLWDE RTLFIGSHQMPLWPGTG ++RG HDN+ N+PL +EMR+ W PA++R+ AF PELLIISAGFDAH+DDPLAQL+W +DF WITR LC++AA VC GRVVS LEGGYDL ALS + + HV+ LM A +
Sbjct: 134 FGTAALAAKYALDVKGLSRVAVVDFDVHHGNGTQDLLWDEPRTLFIGSHQMPLWPGTGTADERGAHDNIQNIPLDPGSTGTEMRAAWEPAIARLAAFNPELLIISAGFDAHKDDPLAQLDWETEDFAWITRALCDMAAKVCGGRVVSTLEGGYDLSALSAAARVHVQELMGAAR 307
BLAST of mRNA_C-australica_Contig_10263.2.1 vs. uniprot
Match:
UPI000EF54ACF (histone deacetylase family protein n=1 Tax=Tropicibacter sp. LMIT003 TaxID=2267683 RepID=UPI000EF54ACF)
HSP 1 Score: 260 bits (665), Expect = 1.050e-84
Identity = 128/172 (74.42%), Postives = 144/172 (83.72%), Query Frame = 1
Query: 1 FGNVAIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDEARTLFIGSHQMPLWPGTGGVEDRGGHDNVLNLPLXXXXXXSEMRSVWTPALSRIRAFQPELLIISAGFDAHQDDPLAQLEWNVDDFRWITRELCNLAADVCDGRVVSCLEGGYDLGALSTSGKAHVEILMEA 516
FG A+AAKHALE GL RVAVVDFDVHHGNGTQDLLWDEAR LFIGSHQMPLWPGTG E+RG HDNV+N+ XXXXXX MR+ W+ A R+RAF+PEL++ISAGFDAH DDPLAQL W V+DF W+TR LC++AAD+C G+VVS LEGGYDL ALS S KAHVE LMEA
Sbjct: 134 FGTAALAAKHALE-RGLDRVAVVDFDVHHGNGTQDLLWDEARALFIGSHQMPLWPGTGSAEERGAHDNVVNMXXXXXXXXXXMRAAWSAAFDRLRAFRPELIVISAGFDAHADDPLAQLNWQVEDFVWVTRGLCDVAADICGGKVVSTLEGGYDLSALSASAKAHVETLMEA 304
BLAST of mRNA_C-australica_Contig_10263.2.1 vs. uniprot
Match:
UPI001FF61D27 (histone deacetylase family protein n=1 Tax=Marivita sp. S6314 TaxID=2926406 RepID=UPI001FF61D27)
HSP 1 Score: 259 bits (663), Expect = 2.240e-84
Identity = 122/175 (69.71%), Postives = 141/175 (80.57%), Query Frame = 1
Query: 1 FGNVAIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDEARTLFIGSHQMPLWPGTGGVEDRGGHDNVLNLPLXXXXXXSEMRSVW-TPALSRIRAFQPELLIISAGFDAHQDDPLAQLEWNVDDFRWITRELCNLAADVCDGRVVSCLEGGYDLGALSTSGKAHVEILMEAGQ 522
FGN AI AKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDE R L I S QMPLWPGTG +RG HDNVLN+PL +EMR+ + T R+R F PEL+I+SAGFDAHQDDPLA+L+W+ +DFRW+T+ELC LAA++CDGRVVS LEGGYDL AL+ S + HVE LMEA +
Sbjct: 134 FGNAAIGAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDEVRALIITSQQMPLWPGTGDPSERGAHDNVLNVPLPPRSGGAEMRAAYETQVFPRLREFAPELIILSAGFDAHQDDPLAELQWSTEDFRWLTQELCALAAEICDGRVVSTLEGGYDLSALAASARVHVEELMEAAK 308
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10263.2.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 4.23e-113 / Id = 95.98 Expect = 2.79e-104 / Id = 83.82 Expect = 1.24e-100 / Id = 86.21 Expect = 1.92e-97 / Id = 82.18 Expect = 2.96e-94 / Id = 72.99 Expect = 2.01e-87 / Id = 76.16 Expect = 1.68e-86 / Id = 72.99 Expect = 2.67e-85 / Id = 68.97 Expect = 1.05e-84 / Id = 74.42 Expect = 2.24e-84 / Id = 69.71 Sequence A0A222E455_9RHOB A0A238K6D1_9RHOB A0A0B3SEQ3_9RHOB UPI001C95ED94 UPI0010A611A0 X6L1L7_9RHOB UPI001ADF03E7 A0A0P1G8Y4_9RHOB UPI000EF54ACF UPI001FF61D27 Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10263.2.1
>prot_C-australica_Contig_10263.2.1 ID=prot_C-australica_Contig_10263.2.1|Name=mRNA_C-australica_Contig_10263.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=175bp
FGNVAIAAKHALEAHGLSRVAVVDFDVHHGNGTQDLLWDEARTLFIGSHQ back to top mRNA from alignment at C-australica_Contig_10263:304..828-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10263.2.1 ID=mRNA_C-australica_Contig_10263.2.1|Name=mRNA_C-australica_Contig_10263.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=525bp|location=Sequence derived from alignment at C-australica_Contig_10263:304..828- (Chrysoparadoxa australica CS_1217)TTTGGCAACGTCGCCATTGCCGCGAAACACGCTCTGGAGGCGCATGGACT
GAGCCGTGTGGCGGTGGTCGATTTCGACGTGCATCACGGCAATGGAACGC
AGGACCTGCTGTGGGACGAAGCGCGCACATTGTTCATCGGCTCACACCAG
ATGCCGCTTTGGCCGGGCACCGGCGGGGTGGAAGATCGTGGCGGGCATGA
CAATGTGCTCAACCTGCCACTGCCGCCCGGATCGGGCGGGTCCGAGATGC
GCAGCGTCTGGACGCCTGCGCTATCGCGCATCCGCGCCTTTCAGCCCGAA
TTGCTGATCATCTCCGCCGGCTTTGACGCGCATCAAGATGATCCGCTGGC
GCAGTTGGAATGGAACGTAGACGATTTCCGCTGGATCACTCGCGAATTGT
GCAATCTGGCGGCAGATGTCTGCGACGGTCGCGTGGTGTCCTGCCTCGAA
GGGGGCTATGACCTTGGCGCGCTCAGCACAAGCGGCAAGGCGCATGTGGA
AATCTTGATGGAGGCAGGCCAATGA back to top Coding sequence (CDS) from alignment at C-australica_Contig_10263:304..828-
>mRNA_C-australica_Contig_10263.2.1 ID=mRNA_C-australica_Contig_10263.2.1|Name=mRNA_C-australica_Contig_10263.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=525bp|location=Sequence derived from alignment at C-australica_Contig_10263:304..828- (Chrysoparadoxa australica CS_1217) back to top