mRNA_C-australica_Contig_1023.1.4 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: D7G0L6_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0L6_ECTSI) HSP 1 Score: 699 bits (1805), Expect = 2.800e-210 Identity = 648/1681 (38.55%), Postives = 862/1681 (51.28%), Query Frame = 3
Query: 780 AEDDLGKGGLWFKIERMVVFLQLLALMLEVPVVTWPPFFRKCWSFTHFSLSFMRAPVLWLIGYCGEKFDVTLPNGR-QLLHYESIIGYMVELLWACAAAFVIFFLLQMPDYTSKAQRLEWERQFIHSWFLRSFVPMLFRLCLLLTCCYGLVTYGSLFFPEGVGDAAGLISFASLVLVWALLVVLSFVVRTALVEATKRDAEFSFMITIKSVVKAKIKGALFFLSISYVPLTASIIKALIPLYDWNDTWTTRDRRHNNHHTWCHFMGFPPVVEGSVTYPVLECTSLSGISMLTFSAWMLLLFAWGLPKMVRYLINLLNSSLLGNEDIIKSFGQARYEDRYWVAHLELVEPYPRKAVWLERR---LCDARECLAWLRWQSFR----KLQRAPFLACYMDYQALVARVKVSELCS---EPNHLSMTFISMSSSIWLQLLPLPLLPPQIPKQGWSHRGAVSSSCIELDLLG---KQKQQLEQEMGEGTEERSAVT------------------SFRRYSC-----FNWCICYLQLQCSCAMAYHKNLHYRHQGFLLQNLALALVLTPASQEEADTYGLCRIEYAMALENFQSDHVLEITCWESVLDTSGLVCLVESYSWLHTGWKLVHFAEEGLFIACLMGLGERMHIEVQLLGCAGVLLFFAAKTAKAQPFLYFREACLDMALRCSLISIALLGAAAHTHTFHEQAIEILLGIVTASTVFFGLKLGNFFAFLTHVADASRALLDAAVANVLFKQIDARTLALEPGHAGIQLLMQWDDLLTDQRWSAFMGWPQPRPSNLLGFPEKLFTVKWAALRGIGIQQARTSTTLTLLHDAMIQAEVEPARWMVKNYPALLKAETVNKESPVYLAVMETASMLL-----------------------------------------------------------------DLGRESTPELEWKASRMMELLLSPELQACKIRWNVHQYDLLTEHGEQDLAELAQHVAESFNLRPPKGYEQIDRWRKCDVKVRDYLAEAMCASHGALELHGSGLGDHGHSTLVALSRALQLLSTTYTRPSIFRLHFPQRIKRIDLSSNRMHGPAAKLIAQVLKVNTTVEYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGEKKFWEDAHTCSSKPSAGPPIGDALALNRGLTDLNLARNQLGGTTGSMFAASVRRHPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----LELNLSGNQIGGETAGEISKMLSTEGLGLQKLSMSGCDLTEKVCAKISIPTSTLQR-----CCLSGMLLLGL--CTVSRFIGGWLVCRALGSNRSITWLDLSETGLRERAGMALANSMRELFQAGKLVRPCLVRYLNISSNDIGNDAAKALIGSLINAVTEHLDLASTGI-SQDAGMMIGRMLRHKTLVLGYLNLENNALGRVGANDLFWALRRNRSITSLDLSSNTLGPLFGTAADELEE 5480
+++ G G LWFK ER+V+ LQLLAL L+V WPP F + WS+ + ++R P L L+ G +F +T + + L + +IGY VE+ A A FV FF+LQMPDYTS + W R F+ WF R+ L L L G+ +G +F P V A ++ L + W L+V+LS +V + ATK DAE+SFMI +K VVK K + LFFL ++YVPLTASI++AL+P +DWND W RR NHH WC+FMGFPP +EG+ VLECTS SG+++ T SA ++L FA GLP MVRYL+ L N D+I+SF QAR + + LE + P+P+ VWL RR + AR LR ++ R L+R P + + + + L E +S + +++ L + + K + GA ++ ++DL G K Q + +GT +A+ + R Y + H R + F + ++ + A Q E + + E+ +AL +F+SDH LEITCWESV+DTSGL+ L ESY+W + WK+V E G F+ ++ QLL A VL F T +A+PFLY+REA LD LR +LI + +GAA + ++ L V + + L LG + A D V ++LF+QI F V+WA+LRG+ I +ARTST L+LLHD++I AEVEP RW+V YP LL AET++KESP+ L ++ETA +LL + E L WK R+ E+ LS ELQ ++RWN HQYDLLTEHGE DL+ELAQ++AE+FN++PPKGY + RWRK RD L EA CAS ++L G GLGD G+ +L+++ RAL + +TT+T PS + + R+DLS NRM + IA +L +N T+ L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GE+KFW PSAGP +GDAL NR LT L + N G TG FA+ V RH XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + L+LS + + G A +++ L+T GL++L +S L++ +++ +R C G+ LGL C + +GG LVCRALG NR++ LD+S+ G MALA S+R L++ GK VRPC +R L+IS N +GN+A A++G+L+N T+HLDL+ T + + AG+ IGRMLR T+VL +LN+E+N LGR G N++FWALRRN S+ LD+S N G LFGT AD+LEE
Sbjct: 80 SDERSGGGSLWFKAERIVITLQLLALALDVYGAPWPPLFVRMWSWVWLTNQYLRWPALVLLRRVGREFSLTFGDAQLDLWFFRDVIGYGVEVCAASVAVFVFFFVLQMPDYTSSKPKAAWRRSFLTHWFRRTLPRYLLNLGLCYVAFAGVTYFGEVFVPPDVVKAVIVVGGTLLTVSWILVVLLSLLVHVNVRMATKHDAEYSFMIAMKHVVKTKGRTCLFFLHLAYVPLTASIVRALVPEFDWNDKWAHESRREYNHHVWCNFMGFPPQLEGTAEMIVLECTSTSGVAVHTLSACLVLFFACGLPNMVRYLVRFLFEGFNANVDVIRSFLQAREVHQ---STLEALTPFPKDVVWLARRRREIAFARNAANRLRRRALRVVVVSLRRVPLVRRLPGIRPRRRKKQKRSLADTGREKLSISDEELGATTATVQAGLGESVRIEEDNKDPPAPIGAPGTTLRDVDLYGPGDKHSTQKTLVLSQGTTGATALLEGVAGVAETTTARSGPEETKRPYKAGGXXXXXXXXXXXXXXXXALTEKSEKSHSRLEEFWRRRRKASVGMRQALQAEREAFANASQEFILALSDFESDHSLEITCWESVVDTSGLLYLSESYTWQRSEWKVVEGLERGAFVTAVVVSQHLGPASTQLLVGALVLAVFQTWTFRAEPFLYYREALLDTGLRVALILVLCIGAAGAGGAVPKYVVDTFLLAVGLAGIAAALVLGEVVRGAMVFVGKTLAAADERVNDLLFRQI--------------------------------------------------FVVRWASLRGLDISRARTSTGLSLLHDSVINAEVEPTRWLVHLYPVLLHAETLHKESPLLLGILETARVLLRMEALTARLNDWGLDLPDSASQAGQGSLLGGLGLLGGNVGXXXXXXXXXXXXXXXGGVATEEIQKEADEEEVAALAWKVGRLAEMFLSNELQNAELRWNAHQYDLLTEHGEPDLSELAQNLAEAFNVKPPKGYAHVHRWRKRARFTRDCLGEATCASRSDVDLAGCGLGDRGYKSLLSICRALSVQATTFTWPSPYTTQVRINVVRVDLSGNRMRRKSGYRIADMLLLNKTITDLNLSANALDSGAAKEIFFAARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGERKFWLPTGEIMHVPSAGPSLGDALRYNRTLTVLKVKGNLFGADTGHAFASGVARHXXXXXXXXXXXXXXXXXXXXLALRLNAAKRSTLTRLDVSDNHVGKKAATLFSATLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLGIATAEGGDPSDLGLALGHGLRINKTLTSINLSGNRLPTLEMQRIAEGLADHQSLAHLTLTGEAVNDSAALDLGRLIAQASGAGLVSLDLSRSALAGVGAVAVTRALTTGAHGLERLDLSDNSLSKNAAGELASALQNDERGGRAGC---GVRFLGLARCGLGP-VGGALVCRALGGNRTVEELDMSDNGXXXXXXMALARSLRVLYRNGKTVRPCRMRRLDISRNPLGNEAGVAILGALVNECTQHLDLSYTELRGKAAGLAIGRMLRCHTIVLQHLNVEHNNLGRHGVNEVFWALRRNASLLHLDISDNGAGALFGTEADKLEE 1703
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: A0A835YNL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL2_9STRA) HSP 1 Score: 476 bits (1226), Expect = 8.810e-134 Identity = 383/1267 (30.23%), Postives = 539/1267 (42.54%), Query Frame = 3
Query: 798 KGGLWFKIERMVVFLQLLALMLEVPVVTWPPFFRKCWSFTHFSLSFMRAPVLWLIGYCGEKFDVTLPNGRQLLHYESIIGYMVELLWACAAAFVIFFLLQMPDYTSKAQRLEWERQFIHSWFLRSFVPMLFRLCLLLTCCYGLVTYGSLFFPEGV--GDAAGLISFASLVLVWALLVVLSFVVRTALVEATKRDAEFSFMITIKSVVKA------------------------------------------------------------------------KIKGALFFLSISYVPLTASIIKALIPLYDWNDTWTTRDRRHNNHHTWCHFMGFPPVV--EGSVTYPVLECTSLSGISMLTFSAWMLLLFAWGLPKMVRYLINLLNSSLLGNEDIIKSFGQARYEDRYWVAHLELVEPYPRKAVWLERRLCDARECLAWLRWQSFRKLQRAPFLACYMDYQALVARVKVSELCSEPNHLSMTFISMSSSIWLQLLPLPLLPPQIPKQGWSH-RGAVSSSCIELDLLGKQKQQLEQEMGEGTEERSAVTSFRRYSCFNWCICYLQLQCSCAMAYHKNLHYRHQGFLLQNLALALVLTPASQEEADTYGLCRIEYAMALENFQSDHVLEITCWESVLDTSGLVCLVESYSWLHTG-----------------------WKLVHFAEEGLFI----ACLMGLGERMHIEVQLLGCAGVLLFFAAKTAKAQPFLYFREACLDMALRCSLISIALLGAAAHTHTFHEQAIEILLGIVTASTVFFGLKLGNFFAFLTHVADASRALLDAAVANVLFKQIDARTLALEPGHAGIQLLMQWDDLLTDQRWSAFMGWPQPRPSNLLGFPEKLFTVKWAALRGIGIQQARTSTTLTLLHDAMIQAEVEPARWMVKNYPALLKAETVNKESPVYLAVMETASMLLDLGRESTP------------ELEWKASRMMELLLSPELQACKIRWNVHQYDLLTEHGEQDLAELAQHVAESFNLRPPKGYEQIDRWRK---------------------------CDVKVRDYLAEAMCASHGALELHGSGLGDHGHSTLVALSRALQLLSTTYTRPSIFRLHFPQRIKRIDLSSNRMHGPAAKLIAQVLKVNTTVEYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGEKKFWEDAHTCSSK--PSAGPPIGDALALNRGLTDLNLARNQLGGTTGSMFAASVRRHPR 4163
+G LWFK+ER+V FLQ+L L +VPV +WPP F W ++ ++ +F R P+ WL+ + + TLP+G L HY S++GY E A FV+ +L MPDY A WER ++ W+ RS + L + L YG L FPE V G A L + AS++ ++V LSF + L +A + DA++SF I +++VV A K++ L LSI Y+P++ S+++AL P+ DWNDT R +N + C++ FPP V G+ V+ C S SG+ S+ +L L+ GLP + YL +L + ++SF QAR LE ++ LR QS R+ RA +A + AR C + + + P P W G V + G G G EE + RR H + AL + L A +EE Y R +Y +AL +F+ H LEIT +V+DT+GL+ LV+ W W+ E+ ACL + + QLLG A AA TA+AQPFL+ +EA LD +LR L+ + L+GAA A L+ + A+ V L+L + + L RA +D+ V ++LF Q+ L LE GH G+ LL QWDDLL DQRWS FM WP P P LL K+ TV+WAALRG+ I RTSTTL+LLHDA I+AEVE ARW++ ++P LL +ETV +E PVYL ++E AS LL L E E WKA + + L LSP L+A I W+ HQY + + AELAQH+AE+F+L PP+GY + RW V+++LA A+CA H + L +GLGD G L AL L + PS+ RL +P ++ +DL +NR+ A+ +A L N T+E + MGE++FW+DA S AG +G ALA NRGLT L L +LG G AA++ R R
Sbjct: 134 EGTLWFKVERVVHFLQVLWLARQVPVDSWPPVFTALWGWSSWAATFARTPLPWLLRWAEHRAGYTLPDGLSLWHYRSVVGYTAEAAVPAFAVFVLLHVLSMPDYADPAACRRWERLYLTHWYTRSLLRYLAWGSVAAAIVAALRIYGDLAFPEAVVAGAAVSLAALASVL--GGIVVALSFAIHLRLRDAARHDAKYSFGIMVRAVVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDMDVGIVFVKTMVTEVATKNEGQADGGGKVRMCLLVLSIIYLPVSVSVLQALSPMVDWNDTTAIPVRARHNFNIACYYAAFPPQVLPGGAAPVAVMGCASRSGLCNYALSSVLLALYLGGLPALNAYLAHLCLRAFGSGGAALQSFQQAR-------RRLEAIQ----------------------LR-QSLRR-GRARVVAALRTARRRCAR------CGR------------RADYAAVAPSTPTPAVRKAAAWGDPEGTVEGFVVAA--AG----------GRGQEESRLLKWLRRV--------------------HN-----------PDSALVVELRKALEEERHAYQAARADYILALADFECMHTLEITESCAVVDTAGLLRLVDPLDWRRPPSXXXXXXXXXXXXXXXXXXXXPLWRRTMQLEQVCLALLEQACLSLVAAVLGASAQLLGMAAXXGASAAHTARAQPFLHEQEARLDSSLRSLLLWVTLIGAAQAGGMPSWLAAAALVAVTLAAAVVL-LRLADLGSLLMAFVHGLRAFVDSGVEDLLFSQVHRHALGLETGHEGVLLLSQWDDLLQDQRWSGFMAWPSPVPGTLLSLQNKVMTVRWAALRGLSIDAMRTSTTLSLLHDAFIRAEVEAARWLMHHHPQLLSSETVTREGPVYLGLLEMASTLLRLADEQATAPPPASDGAVMTEARWKAGQFLRLFLSPPLRAAPIVWDAHQYAAMGARAGAEAAELAQHLAEAFDLNPPRGYSRKSRWAAYAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEFLAAALCACHPNVSLVSAGLGDGGLPALRALCHVLAARDIPFIPPSLDRLAYPVVVRMLDLRANRLGTAASVPLAAALHANRTLEAVDLSDNDLDSDSAAAIALAAPHTVFRRLRYRFRIGPEAGPALAQLLRRARALQTLNVGGNS--MGERRFWDDARPDSMIVITGAGEALGVALAANRGLTHLGLTGCRLGPEGGIALAAALERPHR 1303
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: A0A7S2FUC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FUC3_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.230e-39 Identity = 86/180 (47.78%), Postives = 115/180 (63.89%), Query Frame = 3
Query: 5037 NRSITWLDLSETGLRERAGMALANSMRELFQAGKLVRPCLVRYLNISSNDIGNDAAKALIGSLINAVTEHLDLASTGISQDAGMMIGRMLRHKTLVLGYLNLENNALGRVGANDLFWALRRNRSITSLDLSSNTLGPLFGTAADELEEYGTAISSALSLNQTIQSLDLGSNAISAECGVS 5576
NR IT LDLS + E AG ALA + +G++ R C +R LNI N IG+ A ++ +L N V E+L+L + G +GR LR T+ LNLENN LG+ G N +FWALRRN S+TSLDLS+N +GP FGT D L E+GT++ +A+ +N T++ LDLG+N ISAE G S
Sbjct: 2 NRRITSLDLSFNRMDEEAGKALAEGIETKMDSGRVTRKCKIRRLNIYGNPIGSVAGVEILTALSNDVPEYLNLGQCELDHAVGEQLGRALRVPTIGWTELNLENNKLGKDGVNPVFWALRRNVSLTSLDLSTNHIGPQFGTEEDNLGEHGTSVVAAIEMNFTLRWLDLGNNGISAEAGAS 181
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: A0A7S1XYV7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYV7_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.460e-37 Identity = 93/261 (35.63%), Postives = 142/261 (54.41%), Query Frame = 3
Query: 4788 LNLSGNQIGGETAGEISKMLSTEGLGLQKLSMSGCDLTEKVCAKISIPTSTLQRCCLSGMLLLGLCTVSRFIGGWLVCRALGSNRSITWLDLSETGLRERAGMALANSMRELFQAGKLVRPCLVRYLNISSNDIGNDAAKALIGSLINAVTEHLDLASTGISQDAGMMIGRMLRHKTLVLGYLNLENNALGRVGANDLFWALRRNRSITSLDLSSNTLGPLFGTAADELEEYGTAISSALSLNQTIQSLDLGSNAISAECG 5570
L+LS N +G A ++++ ++ EG+ +++L + + G + +AL N SIT+LDL L ++AG LA SMR + + G ++R C VR L + +G +A + ++ ++ N +T + + I G ++G+ LR + LNLE+N LG+ G ND+FWALRRN + SLDLS N GP FGT+AD+LEEYG ++ SAL LN T+ LDLG+N +SAECG
Sbjct: 436 LSLSQNHVGERGANQLAEFINAEGIHIERLELREAHIDGD--------------------------------HGTRLFQALAQNSSITYLDLCGNALSDQAGQELAESMRTVIEKGMVLRKCHVRTLLADNCSLGPEAGERILANMQNTITIKISMGHNNIGSAGGTVVGQALRKGFVAWKELNLESNGLGKDGLNDIFWALRRNTILKSLDLSGNEAGPTFGTSADDLEEYGNSLGSALKLNVTLNWLDLGNNGLSAECG 664
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: A0A7S2FC74_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FC74_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 3.150e-19 Identity = 46/134 (34.33%), Postives = 80/134 (59.70%), Query Frame = 3
Query: 4995 RFIGGWLVCRALGSNRSITWLDLSETGLRERAGMALANSMRELFQAGKLVRPCLVRYLNISSNDIGNDAAKALIGSLINAVTEHLDLASTGISQDAGMMIGRMLRHKTLVLGYLNLENNALGRVGANDLFWALR 5396
R +G ++ + +NR+IT +DLS G+ A A A ++ + ++G++VRPC ++ +N+ N +G+ ++ +L N V E+++L + ++ G + R LR TL LNLE N LG+ GAN +FW+LR
Sbjct: 4 RAVGCRIIAESFATNRTITAVDLSFNGMDSEAAAAFAEAIEKKKESGRVVRPCRMKTVNLYGNRLGSQGVADVVRALANDVPEYINLGKNKVGREGGEAVARALRIPTLRWRELNLEQNVLGKEGANPIFWSLR 137
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: A0A4X2M4H0_VOMUR (NACHT domain-containing protein n=1 Tax=Vombatus ursinus TaxID=29139 RepID=A0A4X2M4H0_VOMUR) HSP 1 Score: 63.9 bits (154), Expect = 4.300e-6 Identity = 73/284 (25.70%), Postives = 115/284 (40.49%), Query Frame = 3
Query: 4788 LNLSGNQIGGETAGEISKMLSTEGLGLQKLSMSGCDLTEKVCAKISIPTSTLQRCCLSGMLLLGLCTVSRFIGGWLVCRALGSNRSITWLDLSETGLRERAGMALANSMRELFQAGKLVRPCLVRYLNISSNDIGNDAAKALIGSLI-NAVTEHLDLASTGISQDAGMMIGRMLRHKTLVLGYLNLENNALGRVGANDLFWALRRNRSITSLDLSSNTLGPLFGTAADELEEYGTA-------------------ISSALSLNQTIQSLDLGSNAISAECGVSL 5579
LNLS N +G + + K L + LQ+L M CDLT+ C +S STL + N+++ LDL+ L++ L +++ + C ++ L + D+ + + + L +LI N HLDL+ + D + L ++ + L L + L G DL AL+RNRS+T L+L+ N LG T E Y +S AL NQ + L+LG N + + GV L
Sbjct: 606 LNLSVNSLGDDGMKLLCKALGNQDCSLQELRMFWCDLTDTCCKDLS---STLIQ-----------------------------NQNLLHLDLAANALKDDGMKLLCEALKHPY--------CQLQNLVLWKCDLTSVSCEYLSFALISNRSLTHLDLSGNSLGNDGIKFLCEALGNQCCRINSLMLRSCGLTVSGCQDLSTALKRNRSVTHLNLADNALGNHGVTLLCEALGYPDCHLKELKLQCCYFSEACCWDLSMALKSNQNLTHLNLGGNTLGND-GVKL 848
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: A0A6P5IWZ4_PHACI (LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 3-like n=3 Tax=Diprotodontia TaxID=38609 RepID=A0A6P5IWZ4_PHACI) HSP 1 Score: 62.8 bits (151), Expect = 1.020e-5 Identity = 76/284 (26.76%), Postives = 116/284 (40.85%), Query Frame = 3
Query: 4788 LNLSGNQIGGETAGEISKMLSTEGLGLQKLSMSGCDLTEKVCAKISIPTSTLQRCCLSGMLLLGLCTVSRFIGGWLVCRALGSNRSITWLDLSETGLRERAGMALANSMRELFQAGKLVRPCLVRYLNISSNDIGNDAAKALIGSLI-NAVTEHLDLASTGISQDAGMMIGRMLRHKTLVLGYLNLENNALGRVGANDLFWALRRNRSITSLDLSSNTLGPLFGTAADELEEYGTA-------------------ISSALSLNQTIQSLDLGSNAISAECGVSL 5579
LNLS N +G + + K L + LQ+L M CDLT+ C +S STL + N+++ LDL LR+ + M+ L +A K C ++ L + D+ + + + L +LI N HLDL+ + D ++ L ++ + L L + G DL AL+RNRS+T L+L+ N LG T E Y +S AL NQ + L+LG N + + GV L
Sbjct: 742 LNLSVNSLGDDGMKLLCKALRNQDCSLQELRMFWCDLTDTCCKDLS---STLIQ-----------------------------NQNLLHLDLGANALRD-------DGMKLLCEALKHPH-CQLQILVLWKCDLTSVSCEYLSFALISNQSLTHLDLSGNNLGNDGIKLLCEALGNQCCNINSLILRSCGFTASGCQDLSTALKRNRSVTHLNLADNALGNYGVTLLCEALGYPDCHLQELKLQCCCFSEACCWDLSMALKSNQNLTHLNLGGNNLGND-GVKL 984
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: A0A835YNF6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNF6_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.730e-5 Identity = 33/85 (38.82%), Postives = 52/85 (61.18%), Query Frame = 3
Query: 5253 LASTGISQDAGMMIGRMLRHKTLVLGYLNLENNALGRVGANDLFWALRRNRSITSLDLSSNTLGPLFGTAADELEEYGTAISSAL 5507
+++TG+ D G I R+LR++T L +L + NAL + GA+ +FWALRRN ++ +LDL+ N G A+ ++ A SS L
Sbjct: 1 MSATGLGADTGAAIARLLRNRTAALRHLRVARNALAQRGADAVFWALRRNAALVTLDLTDNQ-----GAASTNQFQFEIANSSLL 80 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1023.1.4 >prot_C-australica_Contig_1023.1.4 ID=prot_C-australica_Contig_1023.1.4|Name=mRNA_C-australica_Contig_1023.1.4|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=1992bp MGKIKRYKKVKRRVHVESQPEQEDEGDSYLNSSGKESNDGGSTNSSVSQKback to top mRNA from alignment at C-australica_Contig_1023:44..16641+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1023.1.4 ID=mRNA_C-australica_Contig_1023.1.4|Name=mRNA_C-australica_Contig_1023.1.4|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=16598bp|location=Sequence derived from alignment at C-australica_Contig_1023:44..16641+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1023:44..16641+ >mRNA_C-australica_Contig_1023.1.4 ID=mRNA_C-australica_Contig_1023.1.4|Name=mRNA_C-australica_Contig_1023.1.4|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=5976bp|location=Sequence derived from alignment at C-australica_Contig_1023:44..16641+ (Chrysoparadoxa australica CS_1217)back to top |