mRNA_C-australica_Contig_1023.1.4 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: D7G0L6_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0L6_ECTSI) HSP 1 Score: 699 bits (1805), Expect = 2.800e-210 Identity = 648/1681 (38.55%), Postives = 862/1681 (51.28%), Query Frame = 3 Query: 780 AEDDLGKGGLWFKIERMVVFLQLLALMLEVPVVTWPPFFRKCWSFTHFSLSFMRAPVLWLIGYCGEKFDVTLPNGR-QLLHYESIIGYMVELLWACAAAFVIFFLLQMPDYTSKAQRLEWERQFIHSWFLRSFVPMLFRLCLLLTCCYGLVTYGSLFFPEGVGDAAGLISFASLVLVWALLVVLSFVVRTALVEATKRDAEFSFMITIKSVVKAKIKGALFFLSISYVPLTASIIKALIPLYDWNDTWTTRDRRHNNHHTWCHFMGFPPVVEGSVTYPVLECTSLSGISMLTFSAWMLLLFAWGLPKMVRYLINLLNSSLLGNEDIIKSFGQARYEDRYWVAHLELVEPYPRKAVWLERR---LCDARECLAWLRWQSFR----KLQRAPFLACYMDYQALVARVKVSELCS---EPNHLSMTFISMSSSIWLQLLPLPLLPPQIPKQGWSHRGAVSSSCIELDLLG---KQKQQLEQEMGEGTEERSAVT------------------SFRRYSC-----FNWCICYLQLQCSCAMAYHKNLHYRHQGFLLQNLALALVLTPASQEEADTYGLCRIEYAMALENFQSDHVLEITCWESVLDTSGLVCLVESYSWLHTGWKLVHFAEEGLFIACLMGLGERMHIEVQLLGCAGVLLFFAAKTAKAQPFLYFREACLDMALRCSLISIALLGAAAHTHTFHEQAIEILLGIVTASTVFFGLKLGNFFAFLTHVADASRALLDAAVANVLFKQIDARTLALEPGHAGIQLLMQWDDLLTDQRWSAFMGWPQPRPSNLLGFPEKLFTVKWAALRGIGIQQARTSTTLTLLHDAMIQAEVEPARWMVKNYPALLKAETVNKESPVYLAVMETASMLL-----------------------------------------------------------------DLGRESTPELEWKASRMMELLLSPELQACKIRWNVHQYDLLTEHGEQDLAELAQHVAESFNLRPPKGYEQIDRWRKCDVKVRDYLAEAMCASHGALELHGSGLGDHGHSTLVALSRALQLLSTTYTRPSIFRLHFPQRIKRIDLSSNRMHGPAAKLIAQVLKVNTTVEYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGEKKFWEDAHTCSSKPSAGPPIGDALALNRGLTDLNLARNQLGGTTGSMFAASVRRHPRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----LELNLSGNQIGGETAGEISKMLSTEGLGLQKLSMSGCDLTEKVCAKISIPTSTLQR-----CCLSGMLLLGL--CTVSRFIGGWLVCRALGSNRSITWLDLSETGLRERAGMALANSMRELFQAGKLVRPCLVRYLNISSNDIGNDAAKALIGSLINAVTEHLDLASTGI-SQDAGMMIGRMLRHKTLVLGYLNLENNALGRVGANDLFWALRRNRSITSLDLSSNTLGPLFGTAADELEE 5480
+++ G G LWFK ER+V+ LQLLAL L+V WPP F + WS+ + ++R P L L+ G +F +T + + L + +IGY VE+ A A FV FF+LQMPDYTS + W R F+ WF R+ L L L G+ +G +F P V A ++ L + W L+V+LS +V + ATK DAE+SFMI +K VVK K + LFFL ++YVPLTASI++AL+P +DWND W RR NHH WC+FMGFPP +EG+ VLECTS SG+++ T SA ++L FA GLP MVRYL+ L N D+I+SF QAR + + LE + P+P+ VWL RR + AR LR ++ R L+R P + + + + L E +S + +++ L + + K + GA ++ ++DL G K Q + +GT +A+ + R Y + H R + F + ++ + A Q E + + E+ +AL +F+SDH LEITCWESV+DTSGL+ L ESY+W + WK+V E G F+ ++ QLL A VL F T +A+PFLY+REA LD LR +LI + +GAA + ++ L V + + L LG + A D V ++LF+QI F V+WA+LRG+ I +ARTST L+LLHD++I AEVEP RW+V YP LL AET++KESP+ L ++ETA +LL + E L WK R+ E+ LS ELQ ++RWN HQYDLLTEHGE DL+ELAQ++AE+FN++PPKGY + RWRK RD L EA CAS ++L G GLGD G+ +L+++ RAL + +TT+T PS + + R+DLS NRM + IA +L +N T+ L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GE+KFW PSAGP +GDAL NR LT L + N G TG FA+ V RH XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + L+LS + + G A +++ L+T GL++L +S L++ +++ +R C G+ LGL C + +GG LVCRALG NR++ LD+S+ G MALA S+R L++ GK VRPC +R L+IS N +GN+A A++G+L+N T+HLDL+ T + + AG+ IGRMLR T+VL +LN+E+N LGR G N++FWALRRN S+ LD+S N G LFGT AD+LEE
Sbjct: 80 SDERSGGGSLWFKAERIVITLQLLALALDVYGAPWPPLFVRMWSWVWLTNQYLRWPALVLLRRVGREFSLTFGDAQLDLWFFRDVIGYGVEVCAASVAVFVFFFVLQMPDYTSSKPKAAWRRSFLTHWFRRTLPRYLLNLGLCYVAFAGVTYFGEVFVPPDVVKAVIVVGGTLLTVSWILVVLLSLLVHVNVRMATKHDAEYSFMIAMKHVVKTKGRTCLFFLHLAYVPLTASIVRALVPEFDWNDKWAHESRREYNHHVWCNFMGFPPQLEGTAEMIVLECTSTSGVAVHTLSACLVLFFACGLPNMVRYLVRFLFEGFNANVDVIRSFLQAREVHQ---STLEALTPFPKDVVWLARRRREIAFARNAANRLRRRALRVVVVSLRRVPLVRRLPGIRPRRRKKQKRSLADTGREKLSISDEELGATTATVQAGLGESVRIEEDNKDPPAPIGAPGTTLRDVDLYGPGDKHSTQKTLVLSQGTTGATALLEGVAGVAETTTARSGPEETKRPYKAGGXXXXXXXXXXXXXXXXALTEKSEKSHSRLEEFWRRRRKASVGMRQALQAEREAFANASQEFILALSDFESDHSLEITCWESVVDTSGLLYLSESYTWQRSEWKVVEGLERGAFVTAVVVSQHLGPASTQLLVGALVLAVFQTWTFRAEPFLYYREALLDTGLRVALILVLCIGAAGAGGAVPKYVVDTFLLAVGLAGIAAALVLGEVVRGAMVFVGKTLAAADERVNDLLFRQI--------------------------------------------------FVVRWASLRGLDISRARTSTGLSLLHDSVINAEVEPTRWLVHLYPVLLHAETLHKESPLLLGILETARVLLRMEALTARLNDWGLDLPDSASQAGQGSLLGGLGLLGGNVGXXXXXXXXXXXXXXXGGVATEEIQKEADEEEVAALAWKVGRLAEMFLSNELQNAELRWNAHQYDLLTEHGEPDLSELAQNLAEAFNVKPPKGYAHVHRWRKRARFTRDCLGEATCASRSDVDLAGCGLGDRGYKSLLSICRALSVQATTFTWPSPYTTQVRINVVRVDLSGNRMRRKSGYRIADMLLLNKTITDLNLSANALDSGAAKEIFFAARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGERKFWLPTGEIMHVPSAGPSLGDALRYNRTLTVLKVKGNLFGADTGHAFASGVARHXXXXXXXXXXXXXXXXXXXXLALRLNAAKRSTLTRLDVSDNHVGKKAATLFSATLKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLGIATAEGGDPSDLGLALGHGLRINKTLTSINLSGNRLPTLEMQRIAEGLADHQSLAHLTLTGEAVNDSAALDLGRLIAQASGAGLVSLDLSRSALAGVGAVAVTRALTTGAHGLERLDLSDNSLSKNAAGELASALQNDERGGRAGC---GVRFLGLARCGLGP-VGGALVCRALGGNRTVEELDMSDNGXXXXXXMALARSLRVLYRNGKTVRPCRMRRLDISRNPLGNEAGVAILGALVNECTQHLDLSYTELRGKAAGLAIGRMLRCHTIVLQHLNVEHNNLGRHGVNEVFWALRRNASLLHLDISDNGAGALFGTEADKLEE 1703
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: A0A835YNL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL2_9STRA) HSP 1 Score: 476 bits (1226), Expect = 8.810e-134 Identity = 383/1267 (30.23%), Postives = 539/1267 (42.54%), Query Frame = 3 Query: 798 KGGLWFKIERMVVFLQLLALMLEVPVVTWPPFFRKCWSFTHFSLSFMRAPVLWLIGYCGEKFDVTLPNGRQLLHYESIIGYMVELLWACAAAFVIFFLLQMPDYTSKAQRLEWERQFIHSWFLRSFVPMLFRLCLLLTCCYGLVTYGSLFFPEGV--GDAAGLISFASLVLVWALLVVLSFVVRTALVEATKRDAEFSFMITIKSVVKA------------------------------------------------------------------------KIKGALFFLSISYVPLTASIIKALIPLYDWNDTWTTRDRRHNNHHTWCHFMGFPPVV--EGSVTYPVLECTSLSGISMLTFSAWMLLLFAWGLPKMVRYLINLLNSSLLGNEDIIKSFGQARYEDRYWVAHLELVEPYPRKAVWLERRLCDARECLAWLRWQSFRKLQRAPFLACYMDYQALVARVKVSELCSEPNHLSMTFISMSSSIWLQLLPLPLLPPQIPKQGWSH-RGAVSSSCIELDLLGKQKQQLEQEMGEGTEERSAVTSFRRYSCFNWCICYLQLQCSCAMAYHKNLHYRHQGFLLQNLALALVLTPASQEEADTYGLCRIEYAMALENFQSDHVLEITCWESVLDTSGLVCLVESYSWLHTG-----------------------WKLVHFAEEGLFI----ACLMGLGERMHIEVQLLGCAGVLLFFAAKTAKAQPFLYFREACLDMALRCSLISIALLGAAAHTHTFHEQAIEILLGIVTASTVFFGLKLGNFFAFLTHVADASRALLDAAVANVLFKQIDARTLALEPGHAGIQLLMQWDDLLTDQRWSAFMGWPQPRPSNLLGFPEKLFTVKWAALRGIGIQQARTSTTLTLLHDAMIQAEVEPARWMVKNYPALLKAETVNKESPVYLAVMETASMLLDLGRESTP------------ELEWKASRMMELLLSPELQACKIRWNVHQYDLLTEHGEQDLAELAQHVAESFNLRPPKGYEQIDRWRK---------------------------CDVKVRDYLAEAMCASHGALELHGSGLGDHGHSTLVALSRALQLLSTTYTRPSIFRLHFPQRIKRIDLSSNRMHGPAAKLIAQVLKVNTTVEYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMGEKKFWEDAHTCSSK--PSAGPPIGDALALNRGLTDLNLARNQLGGTTGSMFAASVRRHPR 4163
+G LWFK+ER+V FLQ+L L +VPV +WPP F W ++ ++ +F R P+ WL+ + + TLP+G L HY S++GY E A FV+ +L MPDY A WER ++ W+ RS + L + L YG L FPE V G A L + AS++ ++V LSF + L +A + DA++SF I +++VV A K++ L LSI Y+P++ S+++AL P+ DWNDT R +N + C++ FPP V G+ V+ C S SG+ S+ +L L+ GLP + YL +L + ++SF QAR LE ++ LR QS R+ RA +A + AR C + + + P P W G V + G G G EE + RR H + AL + L A +EE Y R +Y +AL +F+ H LEIT +V+DT+GL+ LV+ W W+ E+ ACL + + QLLG A AA TA+AQPFL+ +EA LD +LR L+ + L+GAA A L+ + A+ V L+L + + L RA +D+ V ++LF Q+ L LE GH G+ LL QWDDLL DQRWS FM WP P P LL K+ TV+WAALRG+ I RTSTTL+LLHDA I+AEVE ARW++ ++P LL +ETV +E PVYL ++E AS LL L E E WKA + + L LSP L+A I W+ HQY + + AELAQH+AE+F+L PP+GY + RW V+++LA A+CA H + L +GLGD G L AL L + PS+ RL +P ++ +DL +NR+ A+ +A L N T+E + MGE++FW+DA S AG +G ALA NRGLT L L +LG G AA++ R R
Sbjct: 134 EGTLWFKVERVVHFLQVLWLARQVPVDSWPPVFTALWGWSSWAATFARTPLPWLLRWAEHRAGYTLPDGLSLWHYRSVVGYTAEAAVPAFAVFVLLHVLSMPDYADPAACRRWERLYLTHWYTRSLLRYLAWGSVAAAIVAALRIYGDLAFPEAVVAGAAVSLAALASVL--GGIVVALSFAIHLRLRDAARHDAKYSFGIMVRAVVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVDMDVGIVFVKTMVTEVATKNEGQADGGGKVRMCLLVLSIIYLPVSVSVLQALSPMVDWNDTTAIPVRARHNFNIACYYAAFPPQVLPGGAAPVAVMGCASRSGLCNYALSSVLLALYLGGLPALNAYLAHLCLRAFGSGGAALQSFQQAR-------RRLEAIQ----------------------LR-QSLRR-GRARVVAALRTARRRCAR------CGR------------RADYAAVAPSTPTPAVRKAAAWGDPEGTVEGFVVAA--AG----------GRGQEESRLLKWLRRV--------------------HN-----------PDSALVVELRKALEEERHAYQAARADYILALADFECMHTLEITESCAVVDTAGLLRLVDPLDWRRPPSXXXXXXXXXXXXXXXXXXXXPLWRRTMQLEQVCLALLEQACLSLVAAVLGASAQLLGMAAXXGASAAHTARAQPFLHEQEARLDSSLRSLLLWVTLIGAAQAGGMPSWLAAAALVAVTLAAAVVL-LRLADLGSLLMAFVHGLRAFVDSGVEDLLFSQVHRHALGLETGHEGVLLLSQWDDLLQDQRWSGFMAWPSPVPGTLLSLQNKVMTVRWAALRGLSIDAMRTSTTLSLLHDAFIRAEVEAARWLMHHHPQLLSSETVTREGPVYLGLLEMASTLLRLADEQATAPPPASDGAVMTEARWKAGQFLRLFLSPPLRAAPIVWDAHQYAAMGARAGAEAAELAQHLAEAFDLNPPRGYSRKSRWAAYAPEXXXXXXXXXXXXXXXXXXXXXXXXXXXVQEFLAAALCACHPNVSLVSAGLGDGGLPALRALCHVLAARDIPFIPPSLDRLAYPVVVRMLDLRANRLGTAASVPLAAALHANRTLEAVDLSDNDLDSDSAAAIALAAPHTVFRRLRYRFRIGPEAGPALAQLLRRARALQTLNVGGNS--MGERRFWDDARPDSMIVITGAGEALGVALAANRGLTHLGLTGCRLGPEGGIALAAALERPHR 1303
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: A0A7S2FUC3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FUC3_9STRA) HSP 1 Score: 159 bits (401), Expect = 2.230e-39 Identity = 86/180 (47.78%), Postives = 115/180 (63.89%), Query Frame = 3 Query: 5037 NRSITWLDLSETGLRERAGMALANSMRELFQAGKLVRPCLVRYLNISSNDIGNDAAKALIGSLINAVTEHLDLASTGISQDAGMMIGRMLRHKTLVLGYLNLENNALGRVGANDLFWALRRNRSITSLDLSSNTLGPLFGTAADELEEYGTAISSALSLNQTIQSLDLGSNAISAECGVS 5576
NR IT LDLS + E AG ALA + +G++ R C +R LNI N IG+ A ++ +L N V E+L+L + G +GR LR T+ LNLENN LG+ G N +FWALRRN S+TSLDLS+N +GP FGT D L E+GT++ +A+ +N T++ LDLG+N ISAE G S
Sbjct: 2 NRRITSLDLSFNRMDEEAGKALAEGIETKMDSGRVTRKCKIRRLNIYGNPIGSVAGVEILTALSNDVPEYLNLGQCELDHAVGEQLGRALRVPTIGWTELNLENNKLGKDGVNPVFWALRRNVSLTSLDLSTNHIGPQFGTEEDNLGEHGTSVVAAIEMNFTLRWLDLGNNGISAEAGAS 181
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: A0A7S1XYV7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYV7_9STRA) HSP 1 Score: 164 bits (416), Expect = 2.460e-37 Identity = 93/261 (35.63%), Postives = 142/261 (54.41%), Query Frame = 3 Query: 4788 LNLSGNQIGGETAGEISKMLSTEGLGLQKLSMSGCDLTEKVCAKISIPTSTLQRCCLSGMLLLGLCTVSRFIGGWLVCRALGSNRSITWLDLSETGLRERAGMALANSMRELFQAGKLVRPCLVRYLNISSNDIGNDAAKALIGSLINAVTEHLDLASTGISQDAGMMIGRMLRHKTLVLGYLNLENNALGRVGANDLFWALRRNRSITSLDLSSNTLGPLFGTAADELEEYGTAISSALSLNQTIQSLDLGSNAISAECG 5570
L+LS N +G A ++++ ++ EG+ +++L + + G + +AL N SIT+LDL L ++AG LA SMR + + G ++R C VR L + +G +A + ++ ++ N +T + + I G ++G+ LR + LNLE+N LG+ G ND+FWALRRN + SLDLS N GP FGT+AD+LEEYG ++ SAL LN T+ LDLG+N +SAECG
Sbjct: 436 LSLSQNHVGERGANQLAEFINAEGIHIERLELREAHIDGD--------------------------------HGTRLFQALAQNSSITYLDLCGNALSDQAGQELAESMRTVIEKGMVLRKCHVRTLLADNCSLGPEAGERILANMQNTITIKISMGHNNIGSAGGTVVGQALRKGFVAWKELNLESNGLGKDGLNDIFWALRRNTILKSLDLSGNEAGPTFGTSADDLEEYGNSLGSALKLNVTLNWLDLGNNGLSAECG 664
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: A0A7S2FC74_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FC74_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 3.150e-19 Identity = 46/134 (34.33%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 4995 RFIGGWLVCRALGSNRSITWLDLSETGLRERAGMALANSMRELFQAGKLVRPCLVRYLNISSNDIGNDAAKALIGSLINAVTEHLDLASTGISQDAGMMIGRMLRHKTLVLGYLNLENNALGRVGANDLFWALR 5396
R +G ++ + +NR+IT +DLS G+ A A A ++ + ++G++VRPC ++ +N+ N +G+ ++ +L N V E+++L + ++ G + R LR TL LNLE N LG+ GAN +FW+LR
Sbjct: 4 RAVGCRIIAESFATNRTITAVDLSFNGMDSEAAAAFAEAIEKKKESGRVVRPCRMKTVNLYGNRLGSQGVADVVRALANDVPEYINLGKNKVGREGGEAVARALRIPTLRWRELNLEQNVLGKEGANPIFWSLR 137
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: A0A4X2M4H0_VOMUR (NACHT domain-containing protein n=1 Tax=Vombatus ursinus TaxID=29139 RepID=A0A4X2M4H0_VOMUR) HSP 1 Score: 63.9 bits (154), Expect = 4.300e-6 Identity = 73/284 (25.70%), Postives = 115/284 (40.49%), Query Frame = 3 Query: 4788 LNLSGNQIGGETAGEISKMLSTEGLGLQKLSMSGCDLTEKVCAKISIPTSTLQRCCLSGMLLLGLCTVSRFIGGWLVCRALGSNRSITWLDLSETGLRERAGMALANSMRELFQAGKLVRPCLVRYLNISSNDIGNDAAKALIGSLI-NAVTEHLDLASTGISQDAGMMIGRMLRHKTLVLGYLNLENNALGRVGANDLFWALRRNRSITSLDLSSNTLGPLFGTAADELEEYGTA-------------------ISSALSLNQTIQSLDLGSNAISAECGVSL 5579
LNLS N +G + + K L + LQ+L M CDLT+ C +S STL + N+++ LDL+ L++ L +++ + C ++ L + D+ + + + L +LI N HLDL+ + D + L ++ + L L + L G DL AL+RNRS+T L+L+ N LG T E Y +S AL NQ + L+LG N + + GV L
Sbjct: 606 LNLSVNSLGDDGMKLLCKALGNQDCSLQELRMFWCDLTDTCCKDLS---STLIQ-----------------------------NQNLLHLDLAANALKDDGMKLLCEALKHPY--------CQLQNLVLWKCDLTSVSCEYLSFALISNRSLTHLDLSGNSLGNDGIKFLCEALGNQCCRINSLMLRSCGLTVSGCQDLSTALKRNRSVTHLNLADNALGNHGVTLLCEALGYPDCHLKELKLQCCYFSEACCWDLSMALKSNQNLTHLNLGGNTLGND-GVKL 848
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: A0A6P5IWZ4_PHACI (LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 3-like n=3 Tax=Diprotodontia TaxID=38609 RepID=A0A6P5IWZ4_PHACI) HSP 1 Score: 62.8 bits (151), Expect = 1.020e-5 Identity = 76/284 (26.76%), Postives = 116/284 (40.85%), Query Frame = 3 Query: 4788 LNLSGNQIGGETAGEISKMLSTEGLGLQKLSMSGCDLTEKVCAKISIPTSTLQRCCLSGMLLLGLCTVSRFIGGWLVCRALGSNRSITWLDLSETGLRERAGMALANSMRELFQAGKLVRPCLVRYLNISSNDIGNDAAKALIGSLI-NAVTEHLDLASTGISQDAGMMIGRMLRHKTLVLGYLNLENNALGRVGANDLFWALRRNRSITSLDLSSNTLGPLFGTAADELEEYGTA-------------------ISSALSLNQTIQSLDLGSNAISAECGVSL 5579
LNLS N +G + + K L + LQ+L M CDLT+ C +S STL + N+++ LDL LR+ + M+ L +A K C ++ L + D+ + + + L +LI N HLDL+ + D ++ L ++ + L L + G DL AL+RNRS+T L+L+ N LG T E Y +S AL NQ + L+LG N + + GV L
Sbjct: 742 LNLSVNSLGDDGMKLLCKALRNQDCSLQELRMFWCDLTDTCCKDLS---STLIQ-----------------------------NQNLLHLDLGANALRD-------DGMKLLCEALKHPH-CQLQILVLWKCDLTSVSCEYLSFALISNQSLTHLDLSGNNLGNDGIKLLCEALGNQCCNINSLILRSCGFTASGCQDLSTALKRNRSVTHLNLADNALGNYGVTLLCEALGYPDCHLQELKLQCCCFSEACCWDLSMALKSNQNLTHLNLGGNNLGND-GVKL 984
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Match: A0A835YNF6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNF6_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 1.730e-5 Identity = 33/85 (38.82%), Postives = 52/85 (61.18%), Query Frame = 3 Query: 5253 LASTGISQDAGMMIGRMLRHKTLVLGYLNLENNALGRVGANDLFWALRRNRSITSLDLSSNTLGPLFGTAADELEEYGTAISSAL 5507
+++TG+ D G I R+LR++T L +L + NAL + GA+ +FWALRRN ++ +LDL+ N G A+ ++ A SS L
Sbjct: 1 MSATGLGADTGAAIARLLRNRTAALRHLRVARNALAQRGADAVFWALRRNAALVTLDLTDNQ-----GAASTNQFQFEIANSSLL 80 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1023.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1023.1.4 >prot_C-australica_Contig_1023.1.4 ID=prot_C-australica_Contig_1023.1.4|Name=mRNA_C-australica_Contig_1023.1.4|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=1992bp MGKIKRYKKVKRRVHVESQPEQEDEGDSYLNSSGKESNDGGSTNSSVSQKback to top mRNA from alignment at C-australica_Contig_1023:44..16641+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1023.1.4 ID=mRNA_C-australica_Contig_1023.1.4|Name=mRNA_C-australica_Contig_1023.1.4|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=16598bp|location=Sequence derived from alignment at C-australica_Contig_1023:44..16641+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1023:44..16641+ >mRNA_C-australica_Contig_1023.1.4 ID=mRNA_C-australica_Contig_1023.1.4|Name=mRNA_C-australica_Contig_1023.1.4|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=5976bp|location=Sequence derived from alignment at C-australica_Contig_1023:44..16641+ (Chrysoparadoxa australica CS_1217)back to top |