Homology
BLAST of mRNA_C-australica_Contig_10215.2.1 vs. uniprot
Match:
UPI0003739DEA (hypothetical protein n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI0003739DEA)
HSP 1 Score: 211 bits (537), Expect = 1.760e-68
Identity = 101/107 (94.39%), Postives = 105/107 (98.13%), Query Frame = 1
Query: 1 FGGRHPNFINWSSGVILAANTSELLYAPVVGSRISYGGIVTGIDLFYLTNTEEGTLRLAPVLGFGAHKVQIAIQPHIRISNKSFEPISRGHFAINVKLFSLNKQTLH 321
FGGRHPNFINWSSGVIL+ANT+ELL+APVVGSRISYGGIVTGIDLFYLTNTEEGTLRLAPVLGFGAHKVQIAIQPHIRISNKSFEPISRGHF IN+KLFSL KQTLH
Sbjct: 54 FGGRHPNFINWSSGVILSANTTELLFAPVVGSRISYGGIVTGIDLFYLTNTEEGTLRLAPVLGFGAHKVQIAIQPHIRISNKSFEPISRGHFVINMKLFSLKKQTLH 160
BLAST of mRNA_C-australica_Contig_10215.2.1 vs. uniprot
Match:
A0A7K1XWC7_9SPHI (Uncharacterized protein n=1 Tax=Pedobacter sp. HMF7056 TaxID=2695274 RepID=A0A7K1XWC7_9SPHI)
HSP 1 Score: 93.6 bits (231), Expect = 6.070e-22
Identity = 41/100 (41.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query: 10 RHPNFINWSSGVILAANTSELLYAPVVGSRISYGGIVTGIDLFYLTNTEEGTLRLAPVLGFGAHKVQIAIQPHIRISNKSFEPISRGHFAINVKLFSLNK 309
RH F S G + NT + L P G + GI G DL Y T+ E+GTLRL P++G G+++++++I PH+R++N+ FEPI RGH + V+L +L +
Sbjct: 67 RHGGFGVLSLGTDIGLNTRKFLAGPRAGVLAGFMGICLGADLDYYTDFEQGTLRLVPIIGIGSNRIRLSINPHVRLTNRYFEPIDRGHINLTVRLLTLRR 166
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10215.2.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 1.76e-68 / Id = 94.39 Expect = 6.07e-22 / Id = 41.00 Sequence UPI0003739DEA A0A7K1XWC7_9SPHI
Match Name E-value Identity Description
UPI0003739DEA 1.760e-68 94.39 hypothetical protein n=1 Tax=Balneola vulgaris Tax... [more] A0A7K1XWC7_9SPHI 6.070e-22 41.00 Uncharacterized protein n=1 Tax=Pedobacter sp. HMF... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 0 Seed ortholog 1121104.AQXH01000001_gene1181 Model size 324 Max annot lvl 976|Bacteroidetes Hectar predicted targeting category other localisation Exons 1 Evalue 2.88e-69 EggNOG OGs 2ECZU@1|root,336WU@2|Bacteria,4NWN6@976|Bacteroidetes Cds size 324
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586759.4958997-CDS-C-australica_Contig_10215:508..832 1682586759.4958997-CDS-C-australica_Contig_10215:508..832 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_10215 509..832 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10215.2.1
>prot_C-australica_Contig_10215.2.1 ID=prot_C-australica_Contig_10215.2.1|Name=mRNA_C-australica_Contig_10215.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=108bp
FGGRHPNFINWSSGVILAANTSELLYAPVVGSRISYGGIVTGIDLFYLTN back to top mRNA from alignment at C-australica_Contig_10215:509..832-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10215.2.1 ID=mRNA_C-australica_Contig_10215.2.1|Name=mRNA_C-australica_Contig_10215.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=324bp|location=Sequence derived from alignment at C-australica_Contig_10215:509..832- (Chrysoparadoxa australica CS_1217)TTTGGTGGACGGCATCCAAATTTTATAAACTGGAGTTCAGGGGTCATTCT
TGCAGCAAACACTTCTGAACTGCTCTATGCACCCGTAGTTGGTTCAAGAA
TCTCTTATGGGGGTATCGTCACGGGTATCGACCTTTTTTACCTAACCAAT
ACTGAAGAAGGCACTCTTCGATTAGCTCCTGTTTTAGGTTTTGGTGCTCA
TAAAGTGCAGATTGCAATTCAACCACACATTCGCATTTCAAATAAATCAT
TTGAACCCATCAGTCGTGGTCACTTTGCGATTAACGTGAAATTGTTTTCT
CTCAATAAACAAACCCTTCACTGA back to top Coding sequence (CDS) from alignment at C-australica_Contig_10215:509..832-
>mRNA_C-australica_Contig_10215.2.1 ID=mRNA_C-australica_Contig_10215.2.1|Name=mRNA_C-australica_Contig_10215.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=324bp|location=Sequence derived from alignment at C-australica_Contig_10215:509..832- (Chrysoparadoxa australica CS_1217) back to top