Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 1394 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Cds size | 1320 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586758.7557433-CDS-C-australica_Contig_1021:9140..9333 | 1682586758.7557433-CDS-C-australica_Contig_1021:9140..9333 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1021 9141..9333 - |
| 1682586758.7673779-CDS-C-australica_Contig_1021:9427..9622 | 1682586758.7673779-CDS-C-australica_Contig_1021:9427..9622 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1021 9428..9622 - |
| 1682586758.778441-CDS-C-australica_Contig_1021:9945..10138 | 1682586758.778441-CDS-C-australica_Contig_1021:9945..10138 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1021 9946..10138 - |
| 1682586758.7892914-CDS-C-australica_Contig_1021:10231..10765 | 1682586758.7892914-CDS-C-australica_Contig_1021:10231..10765 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1021 10232..10765 - |
| 1682586758.8013108-CDS-C-australica_Contig_1021:10836..11026 | 1682586758.8013108-CDS-C-australica_Contig_1021:10836..11026 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1021 10837..11026 - |
| 1682586758.8090408-CDS-C-australica_Contig_1021:11118..11133 | 1682586758.8090408-CDS-C-australica_Contig_1021:11118..11133 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1021 11119..11133 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586758.8169923-UTR-C-australica_Contig_1021:11133..11206 | 1682586758.8169923-UTR-C-australica_Contig_1021:11133..11206 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1021 11134..11206 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1021.5.3 >prot_C-australica_Contig_1021.5.3 ID=prot_C-australica_Contig_1021.5.3|Name=mRNA_C-australica_Contig_1021.5.3|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=440bp
MQLARGQDRFDAALRLAKTAPNALLQPQLGGLGSPRGHKPPPPKTSMDWG
ALRSPRAHVPPPPKQSRRGIVSMTLDLQDLGVRFPATQQLPSAKPATTSA
SSSQGGSDSDRPQFHSVPVASVRPKNRWKRALNVLNPRKQHRNPSPNQES
EDFTAIVSEGVQLSSTAPALFSAEKDRAAKKGAMGITAPPRLVIGSGSTQ
SHSRGEGHQSSNAGDSGAWIGLRGSPSASSGSIGHRELPRDSQGRAYPGE
DKGGGQRQEEALQTLEEWAAERAELHRRLDEATAFVETLQQGIQIGREQA
RGGDALSAQERMPGCSLTYEDLHNLRQVLATLMETELPGMLDAKLATMSQ
TMAGPTPAVFTVEKRGDARQEMEDLRCELQASEQARAELEALHAEDAADL
RRWRNSALEGDSSETTDKGGMRKLVASLETELRAERKLLR back to topmRNA from alignment at C-australica_Contig_1021:9141..11206- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_1021.5.3 ID=mRNA_C-australica_Contig_1021.5.3|Name=mRNA_C-australica_Contig_1021.5.3|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2066bp|location=Sequence derived from alignment at C-australica_Contig_1021:9141..11206- (Chrysoparadoxa australica CS_1217)
GTTCGCTGGTGACAAAGAGCAAGGAGTAGAAGGCTCCGCTTCGGCGCTGA
GCCCTCACGTCTGAGGGGATCCCATGCAACTTGCTCGGGTAAGGGCATAG
AATTTTTCTCTCTTCTCTCTCTTCTCTTCTCTCTCTCTCCTCCTCCCTCT
CCCTCTCTCAGACTGTTCCTCTCCTCTCAGGGGCAGGATCGCTTCGATGC
GGCGCTACGCCTCGCAAAGACGGCGCCCAATGCACTGCTTCAGCCTCAAC
TAGGTGGTCTCGGCAGCCCAAGAGGGCATAAGCCCCCTCCACCAAAAACC
TCAATGGACTGGGGTGCTCTGAGAAGCCCTAGGGCACACGTTCCTCCACC
TCCCAAGCAGAGTAGACGAGGTGATAGATAAACCTCCTGCACAGCCTTAT
CGTGAACTCTGCTTACAACTAAGAACACGCTGCCACGGCAGGAATTGTGT
CCATGACATTGGATTTACAGGATCTGGGAGTACGTTTCCCAGCGACTCAG
CAGCTGCCCTCTGCTAAACCTGCCACCACTTCTGCTAGTTCATCTCAGGG
TGGCTCAGACTCGGACCGCCCACAATTTCACTCTGTTCCAGTGGCCTCAG
TCAGGCCTAAGAACAGATGGAAGAGGGCTCTCAATGTGCTTAATCCTCGC
AAGCAACACAGGAATCCAAGCCCGAATCAAGAGTCAGAGGATTTTACGGC
CATTGTCTCAGAGGGAGTGCAGCTAAGTTCAACGGCTCCAGCGCTCTTCT
CGGCTGAGAAGGACAGGGCGGCGAAGAAAGGCGCAATGGGGATCACCGCA
CCGCCCCGGCTGGTCATCGGCAGTGGGTCAACTCAAAGTCATAGCCGGGG
TGAAGGTCACCAGAGCTCGAATGCAGGGGACTCAGGAGCATGGATTGGGC
TACGCGGCTCGCCATCGGCTTCCAGTGGGTCCATTGGGCACAGGGAGTTG
CCTCGTGACAGCCAGGGCCGAGCATGTAAGATTGAGGCACCCAGCTATTA
ACACTGAATAGCGCTTCCCATGACGGGATTTACTGAAGCATAACCGTAGC
CGTTCAAACTCTTGGCAGATCCGGGAGAGGACAAAGGCGGAGGCCAGCGT
CAGGAGGAGGCTTTGCAGACCCTTGAAGAGTGGGCGGCGGAGCGTGCAGA
GCTTCACAGGAGGCTGGACGAGGCAACTGCCTTCGTAGAAACTCTGCAGC
AGGGAATACAAATCGGGCGGGAACAAGCGAGGGGAGGTGATGCACTGAGT
GCGCAGGAGAGGTAACTGTTCCTAACCCTGACTTGGCTTGAGACCCTAAC
TTCTCATTCAAATAGCCTGCCTTTGTGACCTGACAAATCACTGCATACCT
CATGTCACCTCTCACTCTCTTACCTTTGTGTTGACATTACAAGGCACTGG
ATAGCAATGGCCAAGGGTTGAAATTTTGGCAACCCGCCTTTATACAATGC
TCTCTCACTATACAGTATTGCCTCTTGTACTTACTATTATACAAACTTTC
AGTGGCGTAGAAGGGTGCCCCTGACTTACCACAAGGGGTTAGAAAGAGCC
GGCCTGACCTAGCCTTACCCACCTTACACCGCAGGATGCCTGGTTGCTCA
CTGACGTATGAAGACCTCCACAATTTGAGGCAAGTTCTAGCCACTCTAAT
GGAGACGGAGCTGCCTGGCATGCTTGATGCTAAGCTTGCCACCATGAGCC
AGACAATGGCAGGGCCCACCCCAGCAGTATTCACAGTGGAAAAAAGGGGG
GATGCGAGGCAAGAGATGGAAGATCTCAGGTGGGTGATAAAAGCTTTGAC
CAGACCCCATTAGTATAACTAATTTTGGCATGATTGCTCCGTTCGCATCA
CGCTCTCTGTCAACCTGCTTCAGGTGTGAGTTGCAAGCGTCAGAGCAAGC
AAGGGCTGAGCTGGAGGCGCTCCACGCTGAAGATGCAGCAGACTTGAGGA
GATGGAGGAACAGCGCCTTGGAGGGAGACTCATCAGAAACAACAGACAAG
GGCGGGATGCGCAAGCTGGTGGCTAGCCTTGAGACTGAGCTCAGAGCAGA
GCGGAAGCTACTGAGG back to topCoding sequence (CDS) from alignment at C-australica_Contig_1021:9141..11206- >mRNA_C-australica_Contig_1021.5.3 ID=mRNA_C-australica_Contig_1021.5.3|Name=mRNA_C-australica_Contig_1021.5.3|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1320bp|location=Sequence derived from alignment at C-australica_Contig_1021:9141..11206- (Chrysoparadoxa australica CS_1217)
ATGCAACTTGCTCGGGGGCAGGATCGCTTCGATGCGGCGCTACGCCTCGC
AAAGACGGCGCCCAATGCACTGCTTCAGCCTCAACTAGGTGGTCTCGGCA
GCCCAAGAGGGCATAAGCCCCCTCCACCAAAAACCTCAATGGACTGGGGT
GCTCTGAGAAGCCCTAGGGCACACGTTCCTCCACCTCCCAAGCAGAGTAG
ACGAGGAATTGTGTCCATGACATTGGATTTACAGGATCTGGGAGTACGTT
TCCCAGCGACTCAGCAGCTGCCCTCTGCTAAACCTGCCACCACTTCTGCT
AGTTCATCTCAGGGTGGCTCAGACTCGGACCGCCCACAATTTCACTCTGT
TCCAGTGGCCTCAGTCAGGCCTAAGAACAGATGGAAGAGGGCTCTCAATG
TGCTTAATCCTCGCAAGCAACACAGGAATCCAAGCCCGAATCAAGAGTCA
GAGGATTTTACGGCCATTGTCTCAGAGGGAGTGCAGCTAAGTTCAACGGC
TCCAGCGCTCTTCTCGGCTGAGAAGGACAGGGCGGCGAAGAAAGGCGCAA
TGGGGATCACCGCACCGCCCCGGCTGGTCATCGGCAGTGGGTCAACTCAA
AGTCATAGCCGGGGTGAAGGTCACCAGAGCTCGAATGCAGGGGACTCAGG
AGCATGGATTGGGCTACGCGGCTCGCCATCGGCTTCCAGTGGGTCCATTG
GGCACAGGGAGTTGCCTCGTGACAGCCAGGGCCGAGCATATCCGGGAGAG
GACAAAGGCGGAGGCCAGCGTCAGGAGGAGGCTTTGCAGACCCTTGAAGA
GTGGGCGGCGGAGCGTGCAGAGCTTCACAGGAGGCTGGACGAGGCAACTG
CCTTCGTAGAAACTCTGCAGCAGGGAATACAAATCGGGCGGGAACAAGCG
AGGGGAGGTGATGCACTGAGTGCGCAGGAGAGGATGCCTGGTTGCTCACT
GACGTATGAAGACCTCCACAATTTGAGGCAAGTTCTAGCCACTCTAATGG
AGACGGAGCTGCCTGGCATGCTTGATGCTAAGCTTGCCACCATGAGCCAG
ACAATGGCAGGGCCCACCCCAGCAGTATTCACAGTGGAAAAAAGGGGGGA
TGCGAGGCAAGAGATGGAAGATCTCAGGTGTGAGTTGCAAGCGTCAGAGC
AAGCAAGGGCTGAGCTGGAGGCGCTCCACGCTGAAGATGCAGCAGACTTG
AGGAGATGGAGGAACAGCGCCTTGGAGGGAGACTCATCAGAAACAACAGA
CAAGGGCGGGATGCGCAAGCTGGTGGCTAGCCTTGAGACTGAGCTCAGAG
CAGAGCGGAAGCTACTGAGG back to top
|