Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 590 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 588 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586750.6304681-CDS-C-australica_Contig_1016:12180..12229 | 1682586750.6304681-CDS-C-australica_Contig_1016:12180..12229 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1016 12181..12229 - |
| 1682586750.640499-CDS-C-australica_Contig_1016:12392..12861 | 1682586750.640499-CDS-C-australica_Contig_1016:12392..12861 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1016 12393..12861 - |
| 1682586750.6508718-CDS-C-australica_Contig_1016:12956..12993 | 1682586750.6508718-CDS-C-australica_Contig_1016:12956..12993 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1016 12957..12993 - |
| 1682586750.6681616-CDS-C-australica_Contig_1016:13076..13109 | 1682586750.6681616-CDS-C-australica_Contig_1016:13076..13109 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1016 13077..13109 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1016.5.1 >prot_C-australica_Contig_1016.5.1 ID=prot_C-australica_Contig_1016.5.1|Name=mRNA_C-australica_Contig_1016.5.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=196bp
VTIPGIFQPLQVAQSRHQTHAAAEAGWRRRVLVKLKARLEQRLLGLGHID
TTEAAETTEGPVEVEVLENDLAKVEAELGKLGGEVVPSVLSVSPAQEGEE
EGAVATAGIGTDTGVSESETDGTRMGMGMPGVSCDPNRLADSFESHSAAP
ASAPTEVPEQHMQDMQDLERPANFQLLRRRSSVIAQKALLDKATRA back to topmRNA from alignment at C-australica_Contig_1016:12181..13109- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_1016.5.1 ID=mRNA_C-australica_Contig_1016.5.1|Name=mRNA_C-australica_Contig_1016.5.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=929bp|location=Sequence derived from alignment at C-australica_Contig_1016:12181..13109- (Chrysoparadoxa australica CS_1217)
GTCACTATACCAGGCATCTTCCAGCCATTACAGGTGGAACATCATGCATA
GTACACAACCATGCATGCCTATCTGTACCAACTAACCCGCCTGTCACTCT
TATCTCATTGTACCAGGTAGCACAAAGCAGGCACCAAACCCATGCAGCTG
CAGGTACTTGCCACACTCACACTCCTTCCTTCCACTGCTCTGTCATCCAA
TCCATAGATTCATTTAACCCACTCATCACACTGATACTTCTTCTACAGAA
GCTGGTTGGCGTAGACGGGTGCTGGTTAAGTTGAAGGCACGACTGGAGCA
GCGCTTGCTTGGGCTAGGTCACATTGATACTACTGAGGCTGCTGAGACTA
CTGAGGGACCAGTTGAGGTGGAAGTATTAGAGAATGACCTGGCAAAGGTT
GAGGCTGAGCTTGGAAAGCTAGGTGGTGAGGTGGTTCCTTCAGTCCTTTC
AGTGTCACCAGCACAAGAGGGGGAAGAGGAGGGTGCTGTTGCCACCGCAG
GCATTGGCACTGACACTGGCGTGAGCGAGTCTGAGACTGACGGCACCAGA
ATGGGCATGGGCATGCCTGGAGTCAGCTGTGATCCCAATAGGCTGGCCGA
CTCTTTTGAAAGTCACTCTGCTGCACCTGCATCAGCACCAACGGAAGTGC
CAGAGCAACACATGCAAGACATGCAGGACCTGGAGCGTCCAGCTAATTTC
CAGTTACTGAGACGCAGGTTAGACAACCACGCAGCTTGTCGTGCCACTGC
CCTGCAGCTGCCTCACACATGGCTAGACGTACTCCTCTACCAGTTCTTTA
GCTTTTTCCCCTGGCTGTGCTCCCCGCAATAGCTCCTTTTACACACACAC
TCACATGCACCCCTGCCTCCAACCGAGCAGATCTTCTGTGATAGCTCAGA
AGGCACTTCTTGATAAGGCAACACGCGCG back to topCoding sequence (CDS) from alignment at C-australica_Contig_1016:12181..13109- >mRNA_C-australica_Contig_1016.5.1 ID=mRNA_C-australica_Contig_1016.5.1|Name=mRNA_C-australica_Contig_1016.5.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=588bp|location=Sequence derived from alignment at C-australica_Contig_1016:12181..13109- (Chrysoparadoxa australica CS_1217)
GTCACTATACCAGGCATCTTCCAGCCATTACAGGTAGCACAAAGCAGGCA
CCAAACCCATGCAGCTGCAGAAGCTGGTTGGCGTAGACGGGTGCTGGTTA
AGTTGAAGGCACGACTGGAGCAGCGCTTGCTTGGGCTAGGTCACATTGAT
ACTACTGAGGCTGCTGAGACTACTGAGGGACCAGTTGAGGTGGAAGTATT
AGAGAATGACCTGGCAAAGGTTGAGGCTGAGCTTGGAAAGCTAGGTGGTG
AGGTGGTTCCTTCAGTCCTTTCAGTGTCACCAGCACAAGAGGGGGAAGAG
GAGGGTGCTGTTGCCACCGCAGGCATTGGCACTGACACTGGCGTGAGCGA
GTCTGAGACTGACGGCACCAGAATGGGCATGGGCATGCCTGGAGTCAGCT
GTGATCCCAATAGGCTGGCCGACTCTTTTGAAAGTCACTCTGCTGCACCT
GCATCAGCACCAACGGAAGTGCCAGAGCAACACATGCAAGACATGCAGGA
CCTGGAGCGTCCAGCTAATTTCCAGTTACTGAGACGCAGATCTTCTGTGA
TAGCTCAGAAGGCACTTCTTGATAAGGCAACACGCGCG back to top
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