Homology
BLAST of mRNA_C-australica_Contig_1015.1.1 vs. uniprot
Match:
A0A835Z8H7_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8H7_9STRA)
HSP 1 Score: 119 bits (297), Expect = 1.420e-28
Identity = 67/138 (48.55%), Postives = 88/138 (63.77%), Query Frame = 1
Query: 115 RSLRSMRMAAGVIDLPEGETA----FQEMVLDGEGPILVIFGAKW----------CGPCQLVEPITKKTAAQYEGKLK---VIKVNTEQHEPLVGKYSIYGLPYLMVFENGEIIGTHEGAIGGKGMEKLLADAVPSLV 477
R+ S A VIDL + + A F E+VL+ + P+LV F A CGPC+L+EP+ KKTA +YEGK+K V+KVNTE H+ LVG+Y+IYGLP L VF +G++ G HEGA G MEKLL A+P +V
Sbjct: 38 RAACSQLRMAQVIDLDDVDVAKGATFSELVLESDTPVLVDFYANSSLRLFVDVCRCGPCKLIEPLVKKTAEKYEGKMKAEQVVKVNTEVHKELVGQYNIYGLPLLAVFVDGQVKGVHEGAAGAAQMEKLLKGALPEMV 175
BLAST of mRNA_C-australica_Contig_1015.1.1 vs. uniprot
Match:
A0A0D2MZR6_9CHLO (Thioredoxin domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MZR6_9CHLO)
HSP 1 Score: 104 bits (260), Expect = 7.960e-24
Identity = 54/114 (47.37%), Postives = 79/114 (69.30%), Query Frame = 1
Query: 142 AGVIDLPEGETAFQEMVLDGEGPILVIFGAKWCGPCQLVEPITKKTAAQYEGKLKVIKVNTEQHEPLVGKYSIYGLPYLMVFENGEII-GTH-EGAIGGKGMEKLLADAVPSLV 477
A V+++ EGE A+ E VL + P+LV F A WCGPC+LV P+ + +YEG+LKV+KVN + LV KY +YGLP LMVF++G+++ G+H EGA+G + K + VP++V
Sbjct: 12 ARVVEI-EGEEAWNEHVLKSDKPVLVDFWAVWCGPCKLVAPLMEWAEKEYEGRLKVVKVNHTPNPELVAKYKVYGLPTLMVFKDGQLVEGSHREGAVGKSILVKYIDQHVPAVV 124
BLAST of mRNA_C-australica_Contig_1015.1.1 vs. uniprot
Match:
A0A7S0BHJ8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BHJ8_9RHOD)
HSP 1 Score: 103 bits (256), Expect = 1.680e-22
Identity = 53/120 (44.17%), Postives = 79/120 (65.83%), Query Frame = 1
Query: 115 RSLRSMRMAAGVIDLPEGETAFQEMVLDGEGPILVIFGAKWCGPCQLVEPITKKTAAQYEGKLKVIKVNTEQHEPLVGKYSIYGLPYLMVFENGEIIGTHEGAIGGKGMEKLLADAVPSL 474
RS SM+ + V + +FQ V++ + P+LV F A WCGPC+L+ P+ A++YEGKL+V+K++TE++ V +YSI+GLP L +F+NGE I EGAIG + + LL D +P L
Sbjct: 74 RSTLSMKAVSEV-----SKDSFQGEVMESDLPVLVDFYAAWCGPCKLIAPVMDWCASEYEGKLRVVKIDTEKYPNFVREYSIHGLPTLAIFKNGENISQIEGAIGKQKVLDLLKDNLPEL 188
BLAST of mRNA_C-australica_Contig_1015.1.1 vs. uniprot
Match:
A0A7W5EJA0_9GAMM (Thioredoxin n=2 Tax=Luteibacter sp. Sphag1AF TaxID=2587031 RepID=A0A7W5EJA0_9GAMM)
HSP 1 Score: 99.8 bits (247), Expect = 3.550e-22
Identity = 43/99 (43.43%), Postives = 69/99 (69.70%), Query Frame = 1
Query: 169 ETAFQEMVLDGEGPILVIFGAKWCGPCQLVEPITKKTAAQYEGKLKVIKVNTEQHEPLVGKYSIYGLPYLMVFENGEIIGTHEGAIGGKGMEKLLADAV 465
+ AFQ VLD E P+L+ F A+WCGPC+ + PI + AA+Y+GKLKV+K+N +Q++ ++ + G+P LMVF+ G++ GT GA+G +++L+ V
Sbjct: 10 DEAFQRHVLDSETPVLLDFWAEWCGPCKSIAPILDELAAEYQGKLKVVKINIDQNQQTPRQFGVRGIPTLMVFKGGKVEGTQIGAVGKGALQELIKKVV 108
BLAST of mRNA_C-australica_Contig_1015.1.1 vs. uniprot
Match:
A0A7J7INP8_9RHOD (Thioredoxin n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7INP8_9RHOD)
HSP 1 Score: 99.4 bits (246), Expect = 8.220e-22
Identity = 42/99 (42.42%), Postives = 67/99 (67.68%), Query Frame = 1
Query: 178 FQEMVLDGEGPILVIFGAKWCGPCQLVEPITKKTAAQYEGKLKVIKVNTEQHEPLVGKYSIYGLPYLMVFENGEIIGTHEGAIGGKGMEKLLADAVPSL 474
F+ VL E P+LV F A+WCGPC+L+ P+ AA+Y GK+K+ K++TEQ+ + +Y I GLP L++ NG+++ HEGAIG + + L++ +P +
Sbjct: 26 FETEVLQAETPVLVDFYAEWCGPCKLIAPLIDWAAAEYSGKVKIFKLDTEQNPKFLPRYGISGLPTLILLRNGDVVAQHEGAIGKSALVQFLSENLPEI 124
BLAST of mRNA_C-australica_Contig_1015.1.1 vs. uniprot
Match:
A0A4R3YUN6_9GAMM (Thioredoxin n=1 Tax=Luteibacter rhizovicinus TaxID=242606 RepID=A0A4R3YUN6_9GAMM)
HSP 1 Score: 97.4 bits (241), Expect = 2.580e-21
Identity = 42/99 (42.42%), Postives = 68/99 (68.69%), Query Frame = 1
Query: 169 ETAFQEMVLDGEGPILVIFGAKWCGPCQLVEPITKKTAAQYEGKLKVIKVNTEQHEPLVGKYSIYGLPYLMVFENGEIIGTHEGAIGGKGMEKLLADAV 465
+ AFQ VL+ + P+L+ F A+WCGPC+ + PI + A QYEGKLKV+K+N +Q++ +Y + G+P LMVF+NG++ T GA+G + +++ A+
Sbjct: 10 DEAFQRHVLESDTPVLLDFWAEWCGPCKSIAPILDELATQYEGKLKVVKINIDQNQKTPREYGVRGIPTLMVFKNGKVEATQIGAVGKGQLTQMIDKAI 108
BLAST of mRNA_C-australica_Contig_1015.1.1 vs. uniprot
Match:
M2XHT7_GALSU (Thioredoxin 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XHT7_GALSU)
HSP 1 Score: 98.2 bits (243), Expect = 7.220e-21
Identity = 41/102 (40.20%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 169 ETAFQEMVLDGEGPILVIFGAKWCGPCQLVEPITKKTAAQYEGKLKVIKVNTEQHEPLVGKYSIYGLPYLMVFENGEIIGTHEGAIGGKGMEKLLADAVPSL 474
+T F++ VL + P+LV F A WCGPC+LV P+ ++Y GKLKV+K++T+++ V +Y + GLP L++F++G ++ + EGA+G KG+++ + +P L
Sbjct: 66 DTHFEQQVLQSQIPVLVDFHADWCGPCKLVTPLLDWLVSEYGGKLKVVKIDTDKNPRYVKQYDVRGLPTLIIFQDGRLVASSEGALGKKGIQQYIEKHLPQL 167
BLAST of mRNA_C-australica_Contig_1015.1.1 vs. uniprot
Match:
UPI001F033DDC (thioredoxin TrxA n=1 Tax=Luteibacter TaxID=242605 RepID=UPI001F033DDC)
HSP 1 Score: 95.9 bits (237), Expect = 1.080e-20
Identity = 38/99 (38.38%), Postives = 68/99 (68.69%), Query Frame = 1
Query: 169 ETAFQEMVLDGEGPILVIFGAKWCGPCQLVEPITKKTAAQYEGKLKVIKVNTEQHEPLVGKYSIYGLPYLMVFENGEIIGTHEGAIGGKGMEKLLADAV 465
+ AFQ+ VL+ + P+L+ F A+WCGPC+ + P+ + A +YEGKLKV+K+N ++++ +Y I G+P LM+F++G++ GT GA+G + + + +
Sbjct: 14 DAAFQQEVLESDTPVLLDFWAEWCGPCKSIAPVLDQLAGEYEGKLKVVKINIDENQQTPRQYGIRGIPTLMIFKDGKVAGTQIGAVGKAQLSQFIEKTI 112
BLAST of mRNA_C-australica_Contig_1015.1.1 vs. uniprot
Match:
A0A7W1WBT8_9CYAN (Thioredoxin n=5 Tax=Cylindrospermopsis TaxID=77021 RepID=A0A7W1WBT8_9CYAN)
HSP 1 Score: 95.5 bits (236), Expect = 1.500e-20
Identity = 40/97 (41.24%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 169 ETAFQEMVLDGEGPILVIFGAKWCGPCQLVEPITKKTAAQYEGKLKVIKVNTEQHEPLVGKYSIYGLPYLMVFENGEIIGTHEGAIGGKGMEKLLAD 459
+ +F++ V+D P+LV F A WCGPC++V P+ ++ A QY GKLKV+K+NT+++ + KY I +P L+VF+ GE +G H GA+ + K + +
Sbjct: 9 DASFKQEVIDSPIPVLVDFWAPWCGPCRMVAPVVEEIATQYAGKLKVVKINTDENPDVASKYGIRSIPTLIVFKGGEKVGLHVGAVPKSTLSKTVEE 105
BLAST of mRNA_C-australica_Contig_1015.1.1 vs. uniprot
Match:
A0A7H0EWJ6_9CYAN (Thioredoxin n=2 Tax=Cylindrospermopsis TaxID=77021 RepID=A0A7H0EWJ6_9CYAN)
HSP 1 Score: 95.5 bits (236), Expect = 1.500e-20
Identity = 40/97 (41.24%), Postives = 65/97 (67.01%), Query Frame = 1
Query: 169 ETAFQEMVLDGEGPILVIFGAKWCGPCQLVEPITKKTAAQYEGKLKVIKVNTEQHEPLVGKYSIYGLPYLMVFENGEIIGTHEGAIGGKGMEKLLAD 459
+++F++ V+D + P+LV F A WCGPC++V P+ + A QY GKLKV+K+NT+++ + Y I +P L+VF+ GE +G H GA+ + K + D
Sbjct: 9 DSSFKQEVIDSDIPVLVDFWAPWCGPCRMVAPVVDEIATQYAGKLKVVKINTDENPKVASDYGIRSIPTLIVFKGGEKVGFHVGAVPKSTLSKTIED 105
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1015.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.42e-28 / Id = 48.55 Expect = 7.96e-24 / Id = 47.37 Expect = 1.68e-22 / Id = 44.17 Expect = 3.55e-22 / Id = 43.43 Expect = 8.22e-22 / Id = 42.42 Expect = 2.58e-21 / Id = 42.42 Expect = 7.22e-21 / Id = 40.20 Expect = 1.08e-20 / Id = 38.38 Expect = 1.50e-20 / Id = 41.24 Expect = 1.50e-20 / Id = 41.24 Sequence A0A835Z8H7_9STRA A0A0D2MZR6_9CHLO A0A7S0BHJ8_9RHOD A0A7W5EJA0_9GAMM A0A7J7INP8_9RHOD A0A4R3YUN6_9GAMM M2XHT7_GALSU UPI001F033DDC A0A7W1WBT8_9CYAN A0A7H0EWJ6_9CYAN
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1
Start 1
Seed ortholog 130081.XP_005706177.1
PFAMs Thioredoxin
Model size 1103
Max annot lvl 2759|Eukaryota
KEGG ko ko:K03671
KEGG Pathway ko04621,ko05418,map04621,map05418
Hectar predicted targeting category signal peptide
GOs GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008047,GO:0008150,GO:0008152,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0030234,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044093,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0065009,GO:0070887,GO:0097237,GO:0098754,GO:0098772,GO:0098869,GO:1990748
Exons 6
Evalue 3.75e-24
EggNOG OGs COG0526@1|root,KOG0910@2759|Eukaryota
Ec32 ortholog description Thioredoxin-like protein
Ec32 ortholog Ec-03_003300.1
Description glycerol ether metabolic process
Cds size 480
COG category O
BRITE ko00000,ko00001,ko03110
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586749.5214987-UTR-C-australica_Contig_1015:124..130 1682586749.5214987-UTR-C-australica_Contig_1015:124..130 Chrysoparadoxa australica CS_1217 UTR C-australica_Contig_1015 125..130 +
1682586749.5930238-UTR-C-australica_Contig_1015:1175..1792 1682586749.5930238-UTR-C-australica_Contig_1015:1175..1792 Chrysoparadoxa australica CS_1217 UTR C-australica_Contig_1015 1176..1792 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586749.5312953-CDS-C-australica_Contig_1015:130..313 1682586749.5312953-CDS-C-australica_Contig_1015:130..313 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1015 131..313 +
1682586749.5396016-CDS-C-australica_Contig_1015:384..428 1682586749.5396016-CDS-C-australica_Contig_1015:384..428 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1015 385..428 +
1682586749.5527322-CDS-C-australica_Contig_1015:514..548 1682586749.5527322-CDS-C-australica_Contig_1015:514..548 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1015 515..548 +
1682586749.5650218-CDS-C-australica_Contig_1015:631..694 1682586749.5650218-CDS-C-australica_Contig_1015:631..694 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1015 632..694 +
1682586749.573702-CDS-C-australica_Contig_1015:817..877 1682586749.573702-CDS-C-australica_Contig_1015:817..877 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1015 818..877 +
1682586749.5832598-CDS-C-australica_Contig_1015:1079..1175 1682586749.5832598-CDS-C-australica_Contig_1015:1079..1175 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1015 1080..1175 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1015.1.1
>prot_C-australica_Contig_1015.1.1 ID=prot_C-australica_Contig_1015.1.1|Name=mRNA_C-australica_Contig_1015.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=160bp
MRAVWCFVCSLLVAQSAFAFLANGPMGLRHHPSIVTRSLRSMRMAAGVID LPEGETAFQEMVLDGEGPILVIFGAKWCGPCQLVEPITKKTAAQYEGKLK VIKVNTEQHEPLVGKYSIYGLPYLMVFENGEIIGTHEGAIGGKGMEKLLA DAVPSLVES* back to top mRNA from alignment at C-australica_Contig_1015:125..1792+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1015.1.1 ID=mRNA_C-australica_Contig_1015.1.1|Name=mRNA_C-australica_Contig_1015.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1668bp|location=Sequence derived from alignment at C-australica_Contig_1015:125..1792+ (Chrysoparadoxa australica CS_1217)TACAAG ATGCGCGCAGTCTGGTGTTTCGTCTGCTCACTGCTGGTAGCGCA
AAGCGCCTTCGCCTTCCTGGCCAATGGACCCATGGGATTAAGACATCACC
CGAGCATAGTAACTCGCTCCCTTCGATCTATGCGCATGGCGGCAGGGGTG
ATTGACTTACCCGAGGGCGAGACTGCCTTCCAAGAGATG GCAAGATATCA
CAAATCATTATAAGTTGGGCCACGCGCTGCCCTCTCGAAGCTAACCCCCC
TCTCCCATAGGTGCTAGATGGAGAAGGGCCTATCCTGGTGATCTTTGGCG
CCAA GTAAGATCAGTTCCTAAGTTGTAACATGAACCCCAGCCCGCCCCTG
ACCCGAGATCACGCTCCCTCCCCACCGCCACTACTTCCAGGTGGTGCGGC
CCTTGCCAATTGGTGGAGCCAATT GTCAGTAGTCAAAGAATGCCCTGAAC
CTGCTTTCTCCCCTCCACTTGCTCAATCTCTTCGCTGACTTCCGTTTCTT
CCCACAGACAAAGAAGACAGCAGCCCAATATGAGGGCAAGCTGAAGGTGA
TCAAGGTCAACACAGAGCAG GTGACTGATGTGCCCAATTTAATCGATCAT
CCCCAACAGTCTCAGCGCGAAAAGCTGTCTGACTATATCGCACAATTACG
TCACCTAACATTTTTCGCACCCTTGACACACTCACTCATGAAGCACGAGC
CATTGGTGGGGAAATATAGCATATACGGGCTGCCATACTTGATGGTCTTT
GAG GTACGAACTCATCATGCGCGGCTCCAGACATGACGTCCTCTTCCTGC
AAAGAGTTGCTCCCTGTTTTTGTTATCTCACATGCAAAGAGACTTCTCCA
GTGACCCCCTAACGTGAGAAGTTGATTCACTCAATGATTCTATCCCACGT
TTTTTATTGGTCAATTGACTCGTCCACTCACTTACCTTACACCTTCTATG
CACAGAACGGTGAAATCATTGGCACACATGAGGGGGCTATTGGTGGCAAG
GGCATGGAGAAGCTGCTGGCAGATGCTGTGCCAAGCTTGGTGGAGAGCTA
G CTGTTCGAAAAACATACCTGTTTTGCTTTGGCTGAGCTGATTTGATTAG
GTGTGTTTAGCCATTTTATTCTCATTGCGAGGAGGAGCTAAGTTACCAGA
CGTATCATAGCACTTAAGATAGTACCATAGCCCATGGTATAAGATACGGA
AGCCGTGAAAAGATGTCATTTTTCTGAACGAGGGGGGAGCAACCTACTTC
ATGTGCTGCACTCTCTTGAGATCTAGTGGTTACAGGTATATCAAAGATCC
TGATGTATAGAATCTTGCCAACCAGGGGTCTCTGAAGGCCCTGGGCGTAG
AGATCATTGAGGGCAAGGGCTCCCTGAGCGATGCCCATAGCGTGAAAGGT
GATCACAAGCAAAGACCTTCACCGCCAAGACATCATCCTTGCACCAGGTC
CCATTCCCTTTGTGCCTCCTAGAAGACAACAGCCTTCACAACTGTCAGAT
GGACTGCCTGACTGGTTAAGTCCCCCCCCAACGTCGACTGCATTGGTGAT
GCCAACGGCAAGATGATGCTTGTCCATGCTGCCTCAACGCAGAGCATCAG
AGCACATTAGTGCTATTGAGAACAGTTCCTCATGCTGTGGAAAAGTATGG
TTATAATTCCTCCATTCT back to top Coding sequence (CDS) from alignment at C-australica_Contig_1015:125..1792+
>mRNA_C-australica_Contig_1015.1.1 ID=mRNA_C-australica_Contig_1015.1.1|Name=mRNA_C-australica_Contig_1015.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=480bp|location=Sequence derived from alignment at C-australica_Contig_1015:125..1792+ (Chrysoparadoxa australica CS_1217) ATGCGCGCAGTCTGGTGTTTCGTCTGCTCACTGCTGGTAGCGCAAAGCGC CTTCGCCTTCCTGGCCAATGGACCCATGGGATTAAGACATCACCCGAGCA TAGTAACTCGCTCCCTTCGATCTATGCGCATGGCGGCAGGGGTGATTGAC TTACCCGAGGGCGAGACTGCCTTCCAAGAGATGGTGCTAGATGGAGAAGG GCCTATCCTGGTGATCTTTGGCGCCAAGTGGTGCGGCCCTTGCCAATTGG TGGAGCCAATTACAAAGAAGACAGCAGCCCAATATGAGGGCAAGCTGAAG GTGATCAAGGTCAACACAGAGCAGCACGAGCCATTGGTGGGGAAATATAG CATATACGGGCTGCCATACTTGATGGTCTTTGAGAACGGTGAAATCATTG GCACACATGAGGGGGCTATTGGTGGCAAGGGCATGGAGAAGCTGCTGGCA GATGCTGTGCCAAGCTTGGTGGAGAGCTAG back to top