Homology
BLAST of mRNA_C-australica_Contig_10146.1.1 vs. uniprot
Match:
E0XV88_9RHOB (Uncharacterized protein n=1 Tax=uncultured Rhodobacterales bacterium HF4000_03E16 TaxID=710785 RepID=E0XV88_9RHOB)
HSP 1 Score: 59.7 bits (143), Expect = 2.830e-10
Identity = 31/44 (70.45%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 10 VVGRGGLEPPTSRLSGVRSNHLSYRP---------RQAGRPDVL 114
+VGRGGLEPPTSRLSGVRSNHLSYRP R+AG P VL
Sbjct: 58 LVGRGGLEPPTSRLSGVRSNHLSYRPKLILPAGKYRRAGGPLVL 101
BLAST of mRNA_C-australica_Contig_10146.1.1 vs. uniprot
Match:
A0A2H1Q3R2_XANCH (Uncharacterized protein n=1 Tax=Xanthomonas campestris pv. phaseoli TaxID=317013 RepID=A0A2H1Q3R2_XANCH)
HSP 1 Score: 53.9 bits (128), Expect = 3.040e-8
Identity = 24/27 (88.89%), Postives = 25/27 (92.59%), Query Frame = 1
Query: 10 VVGRGGLEPPTSRLSGVRSNHLSYRPR 90
VVG GGLEPPTS LSGVRSNHLSYRP+
Sbjct: 7 VVGLGGLEPPTSPLSGVRSNHLSYRPK 33
BLAST of mRNA_C-australica_Contig_10146.1.1 vs. uniprot
Match:
H6SIE5_PARPM (Uncharacterized protein (Fragment) n=2 Tax=Pararhodospirillum photometricum DSM 122 TaxID=1150469 RepID=H6SIE5_PARPM)
HSP 1 Score: 54.3 bits (129), Expect = 3.630e-8
Identity = 26/43 (60.47%), Postives = 31/43 (72.09%), Query Frame = 1
Query: 7 MVVGRGGLEPPTSRLSGVRSNHLSYRPRQAGRPDVLLKRYGDG 135
++VG G LE PTSRLSGVRSNHLSYRP+ + KR+ DG
Sbjct: 40 LLVGLGRLERPTSRLSGVRSNHLSYRPKALPKRHKRRKRWEDG 82
BLAST of mRNA_C-australica_Contig_10146.1.1 vs. uniprot
Match:
A0A0C6FG27_9HYPH (Uncharacterized protein n=1 Tax=Methylobacterium aquaticum TaxID=270351 RepID=A0A0C6FG27_9HYPH)
HSP 1 Score: 51.6 bits (122), Expect = 2.370e-7
Identity = 29/49 (59.18%), Postives = 32/49 (65.31%), Query Frame = 1
Query: 10 VVGRGGLEPPTSRLSGVRSNHLSYRPRQAGRPDVLL--KRYGDGLVRLI 150
+VG G LE PTS LSGVRSNHLSYRP R V + KR DG RL+
Sbjct: 28 MVGLGRLERPTSPLSGVRSNHLSYRPVAGSRQRVRMMRKRNEDGASRLM 76
BLAST of mRNA_C-australica_Contig_10146.1.1 vs. uniprot
Match:
A0A653VLB7_9BACI (Uncharacterized protein n=2 Tax=Bacillus altitudinis complex TaxID=1792192 RepID=A0A653VLB7_9BACI)
HSP 1 Score: 51.6 bits (122), Expect = 4.220e-7
Identity = 23/29 (79.31%), Postives = 26/29 (89.66%), Query Frame = 1
Query: 1 RRMVVGRGGLEPPTSRLSGVRSNHLSYRP 87
R+++VG GLEPPTSRLSGVRSN LSYRP
Sbjct: 25 RKVMVGLSGLEPPTSRLSGVRSNQLSYRP 53
BLAST of mRNA_C-australica_Contig_10146.1.1 vs. uniprot
Match:
UPI001AFAB205 (Uncharacterized protein n=1 Tax=Citrobacter freundii TaxID=546 RepID=UPI001AFAB205)
HSP 1 Score: 50.1 bits (118), Expect = 5.180e-7
Identity = 22/31 (70.97%), Postives = 26/31 (83.87%), Query Frame = 1
Query: 1 RRMVVGRGGLEPPTSRLSGVRSNHLSYRPRQ 93
R+ +VG GLEPPTS LSGVRSNHLSY+P +
Sbjct: 10 RKNLVGLSGLEPPTSPLSGVRSNHLSYKPAE 40
BLAST of mRNA_C-australica_Contig_10146.1.1 vs. uniprot
Match:
A0A653L570_9GAMM (Uncharacterized protein n=2 Tax=Aeromonas TaxID=642 RepID=A0A653L570_9GAMM)
HSP 1 Score: 50.8 bits (120), Expect = 5.980e-7
Identity = 23/26 (88.46%), Postives = 23/26 (88.46%), Query Frame = 1
Query: 10 VVGRGGLEPPTSRLSGVRSNHLSYRP 87
VVG GLEPPTS LSGVRSNHLSYRP
Sbjct: 50 VVGLSGLEPPTSPLSGVRSNHLSYRP 75
BLAST of mRNA_C-australica_Contig_10146.1.1 vs. uniprot
Match:
Q2G2J6_STAA8 (Uncharacterized protein n=1 Tax=Staphylococcus aureus (strain NCTC 8325 / PS 47) TaxID=93061 RepID=Q2G2J6_STAA8)
HSP 1 Score: 49.3 bits (116), Expect = 1.220e-6
Identity = 22/26 (84.62%), Postives = 23/26 (88.46%), Query Frame = 1
Query: 10 VVGRGGLEPPTSRLSGVRSNHLSYRP 87
+VG GLEPPTSRLSGVRSN LSYRP
Sbjct: 1 MVGLSGLEPPTSRLSGVRSNQLSYRP 26
BLAST of mRNA_C-australica_Contig_10146.1.1 vs. uniprot
Match:
A0A382IZR8_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382IZR8_9ZZZZ)
HSP 1 Score: 50.4 bits (119), Expect = 1.410e-6
Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 1
Query: 10 VVGRGGLEPPTSRLSGVRSNHLSYRP 87
+VG GG+EPPTSRLSGVRSN LSYRP
Sbjct: 85 LVGLGGVEPPTSRLSGVRSNQLSYRP 110
BLAST of mRNA_C-australica_Contig_10146.1.1 vs. uniprot
Match:
W1IX48_9GAMM (Uncharacterized protein n=1 Tax=Xenorhabdus cabanillasii JM26 TaxID=1427517 RepID=W1IX48_9GAMM)
HSP 1 Score: 48.5 bits (114), Expect = 1.620e-6
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 1
Query: 10 VVGRGGLEPPTSRLSGVRSNHLSYRP 87
+VG GLEPPTS LSGVRSNHLSY+P
Sbjct: 1 MVGLSGLEPPTSPLSGVRSNHLSYKP 26
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10146.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.83e-10 / Id = 70.45 Expect = 3.04e-8 / Id = 88.89 Expect = 3.63e-8 / Id = 60.47 Expect = 2.37e-7 / Id = 59.18 Expect = 4.22e-7 / Id = 79.31 Expect = 5.18e-7 / Id = 70.97 Expect = 5.98e-7 / Id = 88.46 Expect = 1.22e-6 / Id = 84.62 Expect = 1.41e-6 / Id = 84.62 Expect = 1.62e-6 / Id = 80.77 Sequence E0XV88_9RHOB A0A2H1Q3R2_XANCH H6SIE5_PARPM A0A0C6FG27_9HYPH A0A653VLB7_9BACI UPI001AFAB205 A0A653L570_9GAMM Q2G2J6_STAA8 A0A382IZR8_9ZZZZ W1IX48_9GAMM Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10146.1.1
>prot_C-australica_Contig_10146.1.1 ID=prot_C-australica_Contig_10146.1.1|Name=mRNA_C-australica_Contig_10146.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=49bp
MVVGRGGLEPPTSRLSGVRSNHLSYRPRQAGRPDVLLKRYGDGLVRLI* back to top mRNA from alignment at C-australica_Contig_10146:77..229-
Legend: UTR CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10146.1.1 ID=mRNA_C-australica_Contig_10146.1.1|Name=mRNA_C-australica_Contig_10146.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=153bp|location=Sequence derived from alignment at C-australica_Contig_10146:77..229- (Chrysoparadoxa australica CS_1217)CGAAGG ATGGTGGTGGGTCGAGGAGGACTTGAACCTCCGACCTCACGCTT
ATCAGGCGTGCGCTCTAACCACCTGAGCTACCGACCCAGACAGGCCGGCA
GGCCTGATGTATTACTGAAGAGATATGGGGACGGCCTGGTCCGTTTGATA
TAG back to top Coding sequence (CDS) from alignment at C-australica_Contig_10146:77..229-
>mRNA_C-australica_Contig_10146.1.1 ID=mRNA_C-australica_Contig_10146.1.1|Name=mRNA_C-australica_Contig_10146.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=147bp|location=Sequence derived from alignment at C-australica_Contig_10146:77..229- (Chrysoparadoxa australica CS_1217) back to top