Homology
BLAST of mRNA_C-australica_Contig_1014.5.1 vs. uniprot
Match:
D7FRA9_ECTSI (Pyr_redox_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRA9_ECTSI)
HSP 1 Score: 137 bits (344), Expect = 2.490e-33
Identity = 87/236 (36.86%), Postives = 118/236 (50.00%), Query Frame = 1
Query: 163 RRRSSILAGPLLTSLKEIVEDSFQEQLHFDHLCLGGGIAAARWCSHISKAETNSTAAVITAYPQGMFPYSRDAFIRDVVMSSPPHCSGPPPDWYQDQGVTVLHSCQAVRADLDGAFLAVNRVAHDGKGNIVYESSIKISYGKLVIATGACPRSFPAPVPTHNPEDDWATAKLMQAACFLTRHPDLSTGNVGTDGAASLELRTPKEYGFGSVHYIRDAGDAVKLAAAASRTEEDGQE 870
RRRSS LA +L +++E E+ F+E L +D + LGGG+AA W S E + P+WY+ G+T+L CQAV DLD FL V RV G +V+ +IK+ YG+L+IATGA PR + + + +K +Q +C TRHPD+ DG+ L P +GFGSVHY+RD GD VKL A R E DGQ+
Sbjct: 6 RRRSSALAAQVLEAIRETDEEIFEEILQYDLVALGGGVAAGYW-GEGSGGEAHD------------------------------------PEWYKTNGITILSRCQAVSVDLDQKFLKVKRVTASN-GELVFGDTIKVVYGRLLIATGARPRKIADEIKSLD-----NISKGLQGSCCCTRHPDV-------DGSP-LACTFPDRFGFGSVHYLRDFGDTVKLVHAMGRVEADGQD 190
BLAST of mRNA_C-australica_Contig_1014.5.1 vs. uniprot
Match:
A0A7S4A4F3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4F3_9STRA)
HSP 1 Score: 62.4 bits (150), Expect = 2.960e-7
Identity = 63/241 (26.14%), Postives = 93/241 (38.59%), Query Frame = 1
Query: 256 LCLGGGIAAARWCSHISKA---------ETNST-AAVITAYPQGMFPYSRDAFIRDVVMSSPPHCSGPPPDWYQDQGVTVLHSCQAVRADLDGAFLAVNRVAHDGKGNIVYESSIKISYGKLVIATGACPRSFPAPVPTHNPEDDWATAKLMQAACFL--TRHPDLSTGNVGTDGAASLE------------------------LRTPKEYGFGSVHYIRDAGDAVKLAAAASRTEEDGQE 870
L +GGG+AAA H+++A ET+ +++AYP G+ PY R +D + + + P D GV + + D D + + I YE KL+IATGA AK++ +L +H D+ +G + L+ K GFGSVHY+RD GDA K++ A S E DGQE
Sbjct: 8 LVVGGGVAAA----HVAQALCERAEELPETDKALCTILSAYPAGISPYDRSRISKDALDCTRLDATSFPSLELPD-GVALWSGKVVTKCDPDAKKVTYRDAITGDEDEITYE--------KLIIATGA-------------------RAKVLDDQPYLWQDKHSDVVDNGSIEEGGEDIACAPAXXXXXXXXXXXPAPRIRPWCLQADKNCGFGSVHYLRDIGDAAKVSEAVSMKEADGQE 216
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1014.5.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 2.49e-33 / Id = 36.86 Expect = 2.96e-7 / Id = 26.14 Sequence D7FRA9_ECTSI A0A7S4A4F3_9STRA
Match Name E-value Identity Description
D7FRA9_ECTSI 2.490e-33 36.86 Pyr_redox_2 domain-containing protein n=1 Tax=Ecto... [more] A0A7S4A4F3_9STRA 2.960e-7 26.14 Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 1 Seed ortholog 2880.D7FRA9 Preferred name MDAR1 PFAMs Pyr_redox_2 Model size 873 Max annot lvl 2759|Eukaryota KEGG ko ko:K08232 KEGG Reaction R00095 KEGG Pathway ko00053,ko01100,map00053,map01100 Hectar predicted targeting category other localisation GOs GO:0000166,GO:0001101,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005829,GO:0006950,GO:0006970,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009409,GO:0009414,GO:0009415,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009608,GO:0009610,GO:0009620,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009725,GO:0009753,GO:0009941,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010319,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0016656,GO:0016999,GO:0017001,GO:0017076,GO:0017144,GO:0030554,GO:0031090,GO:0031903,GO:0031967,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0042579,GO:0042737,GO:0042743,GO:0042744,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043900,GO:0043903,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0050789,GO:0050896,GO:0051186,GO:0051187,GO:0051704,GO:0051707,GO:0051716,GO:0055114,GO:0065007,GO:0070887,GO:0072593,GO:0097159,GO:0097237,GO:0097367,GO:0098588,GO:0098754,GO:0098805,GO:0098869,GO:1901265,GO:1901363,GO:1901700,GO:1990748 Exons 10 Evalue 1.55e-34 EggNOG OGs COG0446@1|root,KOG1336@2759|Eukaryota Ec32 ortholog description Monodehydroascorbate reductase-like Ec32 ortholog Ec-26_002470.1 EC 1.6.5.4 Description monodehydroascorbate reductase (NADH) activity Cds size 771 COG category J BRITE ko00000,ko00001,ko01000
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586748.830443-UTR-C-australica_Contig_1014:6975..7065 1682586748.830443-UTR-C-australica_Contig_1014:6975..7065 Chrysoparadoxa australica CS_1217 UTR C-australica_Contig_1014 6976..7065 + 1682586748.8429298-UTR-C-australica_Contig_1014:7122..7134 1682586748.8429298-UTR-C-australica_Contig_1014:7122..7134 Chrysoparadoxa australica CS_1217 UTR C-australica_Contig_1014 7123..7134 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586748.8521829-CDS-C-australica_Contig_1014:7134..7202 1682586748.8521829-CDS-C-australica_Contig_1014:7134..7202 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 7135..7202 + 1682586748.8618789-CDS-C-australica_Contig_1014:7272..7321 1682586748.8618789-CDS-C-australica_Contig_1014:7272..7321 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 7273..7321 + 1682586748.871073-CDS-C-australica_Contig_1014:7396..7531 1682586748.871073-CDS-C-australica_Contig_1014:7396..7531 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 7397..7531 + 1682586748.8808692-CDS-C-australica_Contig_1014:7597..7679 1682586748.8808692-CDS-C-australica_Contig_1014:7597..7679 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 7598..7679 + 1682586748.8917336-CDS-C-australica_Contig_1014:7743..7835 1682586748.8917336-CDS-C-australica_Contig_1014:7743..7835 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 7744..7835 + 1682586748.9037497-CDS-C-australica_Contig_1014:7897..7973 1682586748.9037497-CDS-C-australica_Contig_1014:7897..7973 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 7898..7973 + 1682586748.9116967-CDS-C-australica_Contig_1014:8046..8166 1682586748.9116967-CDS-C-australica_Contig_1014:8046..8166 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 8047..8166 + 1682586748.919609-CDS-C-australica_Contig_1014:8239..8331 1682586748.919609-CDS-C-australica_Contig_1014:8239..8331 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 8240..8331 + 1682586748.9319012-CDS-C-australica_Contig_1014:8409..8466 1682586748.9319012-CDS-C-australica_Contig_1014:8409..8466 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 8410..8466 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1014.5.1
>prot_C-australica_Contig_1014.5.1 ID=prot_C-australica_Contig_1014.5.1|Name=mRNA_C-australica_Contig_1014.5.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=257bp
MGEMANLHYPEDLPVGQRTVRRRSSILAGPLLTSLKEIVEDSFQEQLHFD back to top mRNA from alignment at C-australica_Contig_1014:6976..8466+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1014.5.1 ID=mRNA_C-australica_Contig_1014.5.1|Name=mRNA_C-australica_Contig_1014.5.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1491bp|location=Sequence derived from alignment at C-australica_Contig_1014:6976..8466+ (Chrysoparadoxa australica CS_1217)TTTTGATTTCCTTTTGTAACGTGTGTTGGCAGGTCTGAGCTCTAAAGAGT
TGCTTACTGTACCAGGCAGTCCGTTCTCCACTCGTGCACG GTAAGCAAAC
ACCCCAAACGAAGATGATGGAAATCCTTATGCTCACCCAGCACCCAGGCT
TGGCATAAG ATGGGTGAGATGGCAAACCTGCACTACCCTGAGGATCTCCC
TGTCGGCCAGAGGACAGTGAGGCGAAG GTGAGCGCACTCTCCCCGCTCTC
TGCTCTCCCAAGGTCAAACTAACAGCACCAGTTCTTCCCCTGCACAGGTC
AAGTATCCTGGCGGGGCCGCTCCTCACGTCCCTCAAGGAGATAGTG GTGA
GGGATGAGCCTCCCAGTTTCTGTTTGTCGCTCTTCCTTCGCTCAACAATG
AGCCCCTGCCGTTCACTTCAGGAGGACAGCTTCCAAGAGCAGCTTCATTT
TGACCACTTGTGCCTTGGTGGCGGAATAGCTGCAGCGCGATGGTGCAGTC
ACATTTCCAAGGCAGAGACAAATAGCACGGCAGCGGTCATTACTGCGTAC
CCGCAG GTTCATGATGAAGCTAGAAGTACTATCGTATCATTATTTCCTTC
CTTACGCCTGCTAGCACCTCAGGGCATGTTCCCTTACAGCCGTGACGCTT
TCATTCGTGATGTGGTCATGTCGTCACCACCTCACTGCAGTGGGCCACCT
CCAG GTGACCAACCAGTACCGGCACTCCAGGCACACTCGTTCTCACAAAC
CTCCTCAACCTGCTTCAGATTGGTACCAAGACCAAGGTGTGACAGTGCTG
CACAGCTGCCAAGCAGTCAGGGCTGACTTGGACGGAGCCTTCCTTGCCGT
CAACCGAGTG GTAGAGAACCAAGCAAGAACAATACAGCTGACCAAACAAG
ACTAATAATTCCCTCCCGCTAGGCGCACGATGGTAAAGGCAACATAGTGT
ATGAGTCCTCCATAAAGATCAGCTACGGCAAGCTGGTGATTGCCACAG GT
AACTGAATTAAAAAAATCAAATCAGTCAAGCCCTGCTGTTCTGATGCGTG
CGTTTGCACCTTTTGCGCTAGGTGCCTGTCCAAGAAGCTTCCCTGCACCT
GTTCCGACCCATAACCCAGAAGATGACTGGGCAACAGCCAAGCTCATGCA
AGCAGCATGCTTCCTCACGCGGCACCCAGATCTAAGCACAG GCAAGGGCC
AGACAGTAGGAGGGCCTAGCTCTGAAGCTAGAGGCCAGCTCTGACGGTCA
GAGCCCCCCAGCAGGCAACGTGGGCACCGATGGAGCAGCCAGCTTGGAGC
TGCGAACACCCAAGGAGTACGGCTTTGGGTCAGTGCACTACATCAGGGAT
GCGGGG GTAAAGCATCGTAATGTGATAATCCTGGAGATGTGTGGGAGCCA
ACCCCTCCAATTCATTTGCTACCCCACCCGGCAGGATGCAGTCAAACTTG
CTGCCGCTGCCAGCAGGACTGAGGAAGACGGGCAAGAGCCA back to top Coding sequence (CDS) from alignment at C-australica_Contig_1014:6976..8466+
>mRNA_C-australica_Contig_1014.5.1 ID=mRNA_C-australica_Contig_1014.5.1|Name=mRNA_C-australica_Contig_1014.5.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=771bp|location=Sequence derived from alignment at C-australica_Contig_1014:6976..8466+ (Chrysoparadoxa australica CS_1217) back to top