Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1105 |
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-00_008690.1 |
| Cds size | 648 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586746.8925743-UTR-C-australica_Contig_1011:9268..9641 | 1682586746.8925743-UTR-C-australica_Contig_1011:9268..9641 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1011 9269..9641 + |
| 1682586746.9601219-UTR-C-australica_Contig_1011:10783..10867 | 1682586746.9601219-UTR-C-australica_Contig_1011:10783..10867 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1011 10784..10867 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586746.9059663-CDS-C-australica_Contig_1011:9641..9695 | 1682586746.9059663-CDS-C-australica_Contig_1011:9641..9695 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1011 9642..9695 + |
| 1682586746.9139955-CDS-C-australica_Contig_1011:9754..9977 | 1682586746.9139955-CDS-C-australica_Contig_1011:9754..9977 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1011 9755..9977 + |
| 1682586746.9219208-CDS-C-australica_Contig_1011:10120..10251 | 1682586746.9219208-CDS-C-australica_Contig_1011:10120..10251 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1011 10121..10251 + |
| 1682586746.939091-CDS-C-australica_Contig_1011:10374..10422 | 1682586746.939091-CDS-C-australica_Contig_1011:10374..10422 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1011 10375..10422 + |
| 1682586746.950927-CDS-C-australica_Contig_1011:10591..10783 | 1682586746.950927-CDS-C-australica_Contig_1011:10591..10783 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1011 10592..10783 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1011.4.1 >prot_C-australica_Contig_1011.4.1 ID=prot_C-australica_Contig_1011.4.1|Name=mRNA_C-australica_Contig_1011.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=216bp
MDVALDGDDIELDDEDGEELEVALVADDDEDEDDGDAEDDEDDEDDEDGI
SEDALQGADELLGDDEDVIEDEDEVEDLDAELLAEEEAEEVPVVKVAKKR
GRPRKEPAADAGAAKPKAKAKAKAKAKAKRVKRAKKVVFDYNLGEPGTVY
SKDAKGHLLLVHKGAEGDAERCDEILGEAKERFGDLLEVHATVHDEVSLC
LLVAWCLPFRFPLAA* back to topmRNA from alignment at C-australica_Contig_1011:9269..10867+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_1011.4.1 ID=mRNA_C-australica_Contig_1011.4.1|Name=mRNA_C-australica_Contig_1011.4.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1599bp|location=Sequence derived from alignment at C-australica_Contig_1011:9269..10867+ (Chrysoparadoxa australica CS_1217)
CAGTCCTCTGCCAGGGAGGCTTCTCTCACGCTCCTTGCCCTACACATGTT
CTTGTAGCCCCAAGGTACGTAGGAAGAGCTGCGTTGGCATCCAAGAGGAC
CCAGCCTGTCGGAGACGGCATATCACAACTTTGCAGCCTCTCTCGCCAGA
GATGGCTGCTCCGCCTCACACGGTTGCCCTCTTGAAGAGGGCTCACAACT
AGCCTCAGAGAGAACAGCTGCTAGCGCACTGTATTCCCCAGACACATGTG
ACCTTCTCCAGCCCCCTCCATCCCTCCCATTTCATCTTCGCTCTGCAGCC
TCATGGGACAGCATTGGGAGCAGTGATACATGACGGCGATGAAGAAGGAG
ACGAAGCCCTGGGTGATTTAGACATGGATGTGGCTCTTGATGGAGATGAT
ATAGAACTCGACGACGAGGATGGGGAGGTAAGGGATGTTGTCAGATATGT
GGTCAGGCGGCAACCTCATGTTGGCAACACTCCCAGGAGTTAGAGGTAGC
ACTTGTAGCTGATGATGATGAGGATGAGGACGATGGCGATGCTGAAGATG
ATGAAGATGATGAAGATGATGAAGATGGCATCAGTGAGGATGCTTTACAA
GGGGCAGATGAGCTGCTGGGAGACGACGAAGATGTGATTGAGGATGAAGA
CGAAGTAGAAGATTTAGATGCTGAACTCCTGGCAGAGGAGGAAGCAGAGG
AAGTGCCAGGTAGCATTAGAATGCAAGCCTAAGTGAACTGTTCACCATAA
CCACCGCTCCTTATCCTGTGTCTTTTTTTGGGTGGAGATTGAAAGCCTTA
CATGCACATCATAAACATCATGCACATCACACAACATACACCCCTTCCTC
AGTAGTGAAAGTAGCGAAGAAGCGAGGCCGGCCGCGTAAGGAGCCAGCAG
CTGATGCAGGTGCAGCCAAGCCCAAGGCAAAGGCAAAAGCAAAGGCTAAG
GCAAAGGCTAAGCGAGTTAAGAGGGCTAAGAAGGTCACCGCGCCACACCA
CACCTCACCTCACCCTGCTGGCGTGCTTGTTCTAGCTTGAACTTGCCCAA
GAAGCATTCGAACCAGAGGCTCAATGACATACCTCGCTTTCGCTCATCTT
GCCTAGGTAGTATTTGATTATAATCTTGGGGAGCCTGGGACTGTCTACTC
CAAGGTAGGCTTCTGGCTGGGATCATATACACTTCAGTTTTGCCTCTCTC
TTACACAAGATTGTGCCATCTTGACTGGCCCTGGTGAATGAGTGATGAAG
GGGAAAAAAAATCCACATGAAAAAAAAATCATTTAAATAGAAGGCTAAAT
AGAAGGCTAAACCAACCCCTCAGGATGCGAAAGGGCATCTCCTGCTGGTG
CACAAGGGTGCAGAGGGTGACGCTGAGCGCTGTGATGAAATACTTGGGGA
AGCCAAAGAGAGGTTCGGGGACTTGCTTGAGGTGCATGCTACTGTACATG
ACGAGGTAAGTTTATGCTTATTGGTTGCCTGGTGCTTGCCTTTTCGGTTT
CCTCTGGCTGCCTGATCTGCTTCTAGTCTCAAAACACATAAAACACATGG
TTGACGAGTGCTTCCATTCCATTTCGCCCATTCTGCGATCCCAATCAGG back to topCoding sequence (CDS) from alignment at C-australica_Contig_1011:9269..10867+ >mRNA_C-australica_Contig_1011.4.1 ID=mRNA_C-australica_Contig_1011.4.1|Name=mRNA_C-australica_Contig_1011.4.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=648bp|location=Sequence derived from alignment at C-australica_Contig_1011:9269..10867+ (Chrysoparadoxa australica CS_1217)
ATGGATGTGGCTCTTGATGGAGATGATATAGAACTCGACGACGAGGATGG
GGAGGAGTTAGAGGTAGCACTTGTAGCTGATGATGATGAGGATGAGGACG
ATGGCGATGCTGAAGATGATGAAGATGATGAAGATGATGAAGATGGCATC
AGTGAGGATGCTTTACAAGGGGCAGATGAGCTGCTGGGAGACGACGAAGA
TGTGATTGAGGATGAAGACGAAGTAGAAGATTTAGATGCTGAACTCCTGG
CAGAGGAGGAAGCAGAGGAAGTGCCAGTAGTGAAAGTAGCGAAGAAGCGA
GGCCGGCCGCGTAAGGAGCCAGCAGCTGATGCAGGTGCAGCCAAGCCCAA
GGCAAAGGCAAAAGCAAAGGCTAAGGCAAAGGCTAAGCGAGTTAAGAGGG
CTAAGAAGGTAGTATTTGATTATAATCTTGGGGAGCCTGGGACTGTCTAC
TCCAAGGATGCGAAAGGGCATCTCCTGCTGGTGCACAAGGGTGCAGAGGG
TGACGCTGAGCGCTGTGATGAAATACTTGGGGAAGCCAAAGAGAGGTTCG
GGGACTTGCTTGAGGTGCATGCTACTGTACATGACGAGGTAAGTTTATGC
TTATTGGTTGCCTGGTGCTTGCCTTTTCGGTTTCCTCTGGCTGCCTGA back to top
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