Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1958 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-04_004050.1 |
| Cds size | 1479 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586746.7624118-UTR-C-australica_Contig_1011:6059..6343 | 1682586746.7624118-UTR-C-australica_Contig_1011:6059..6343 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1011 6060..6343 - |
| 1682586746.8543262-UTR-C-australica_Contig_1011:8678..8873 | 1682586746.8543262-UTR-C-australica_Contig_1011:8678..8873 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1011 8679..8873 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586746.771477-CDS-C-australica_Contig_1011:6343..6409 | 1682586746.771477-CDS-C-australica_Contig_1011:6343..6409 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1011 6344..6409 - |
| 1682586746.7802162-CDS-C-australica_Contig_1011:6592..6847 | 1682586746.7802162-CDS-C-australica_Contig_1011:6592..6847 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1011 6593..6847 - |
| 1682586746.7899032-CDS-C-australica_Contig_1011:7028..7306 | 1682586746.7899032-CDS-C-australica_Contig_1011:7028..7306 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1011 7029..7306 - |
| 1682586746.8073766-CDS-C-australica_Contig_1011:7447..7493 | 1682586746.8073766-CDS-C-australica_Contig_1011:7447..7493 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1011 7448..7493 - |
| 1682586746.8244014-CDS-C-australica_Contig_1011:7631..7866 | 1682586746.8244014-CDS-C-australica_Contig_1011:7631..7866 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1011 7632..7866 - |
| 1682586746.8347094-CDS-C-australica_Contig_1011:7989..8020 | 1682586746.8347094-CDS-C-australica_Contig_1011:7989..8020 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1011 7990..8020 - |
| 1682586746.844538-CDS-C-australica_Contig_1011:8110..8678 | 1682586746.844538-CDS-C-australica_Contig_1011:8110..8678 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1011 8111..8678 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1011.3.3 >prot_C-australica_Contig_1011.3.3 ID=prot_C-australica_Contig_1011.3.3|Name=mRNA_C-australica_Contig_1011.3.3|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=493bp
MESGQAQNEANVVAPNPEVASVVAPVQDTPTAPSPAAPAEAPSEAPPASE
GEIGGAPPATEAPAAAEAAPAAPVEAVAAPAEAAVPGGYPAAVAPQPGMV
AQPQPGMVAQPGMPAQQMVFPGMTTPATAPGAVYGQAPAQAPTQNEGLLM
MTAAAAAAGVGGYPAAAQPIRQDPAQPVVYAQPVESRDDEPEPMPALDKR
GPPPGEPGTRIQVLWELDAEVSLCYERNRKPCKRFTLTVCQLSFLTIVSC
PSLIYQFVWWGCELLHPVNDGMYDILYDEFEEFESCTRRVIFKSGEELYD
TDDEKTMKYRLEHLYLDLPPLPQQQEAQQAQAQPQEGQLPQQPQQPLQPQ
QPLQAQPQAEQPPQQPPQQPQQPQEPLHPIADNKEAVIPLTEVLQAQEAY
DRANEVSADQAAQLFNSLPFYQQQRIAVGYRTMADKFKDKLRDLAESKRT
DGADLVVTESDIQGILAELKQQAECNQGVADAPQTAAPSSST* back to topmRNA from alignment at C-australica_Contig_1011:6060..8873- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_1011.3.3 ID=mRNA_C-australica_Contig_1011.3.3|Name=mRNA_C-australica_Contig_1011.3.3|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2814bp|location=Sequence derived from alignment at C-australica_Contig_1011:6060..8873- (Chrysoparadoxa australica CS_1217)
TAGCCATGGAAGAAGAGAGGAAGGGAGTGAAGCGGGGCCGTGATGGGGAG
GAGATAGTTGATGGTAAAAGTTTAAAAATGGGTCGTCAAACTGCTGTCTT
GGTTCTGCCAGCTTTGACCTGTTTTGGCAAGCCCCCCCTTGCCCCGTACC
TCCTCCCACGATATCTTTCAAATTTCCATAGGCGCAGCAGGGCAGATGGA
GTCTGGGCAAGCACAAAATGAGGCAAATGTGGTTGCGCCCAATCCAGAGG
TAGCTAGCGTTGTAGCACCCGTCCAGGACACGCCTACTGCGCCGTCGCCT
GCTGCCCCAGCTGAGGCGCCATCTGAGGCCCCACCAGCCTCGGAGGGAGA
GATAGGCGGCGCTCCGCCGGCTACGGAAGCTCCTGCAGCTGCAGAGGCAG
CACCGGCAGCTCCTGTGGAAGCAGTGGCAGCTCCCGCTGAGGCAGCAGTA
CCTGGGGGCTACCCAGCAGCTGTAGCTCCTCAGCCGGGCATGGTTGCCCA
ACCCCAGCCTGGTATGGTTGCCCAGCCAGGCATGCCTGCCCAGCAAATGG
TATTTCCTGGTATGACTACTCCAGCAACAGCACCAGGTGCGGTCTACGGC
CAGGCTCCTGCACAGGCACCAACGCAAAATGAAGGCCTGCTCATGATGAC
TGCTGCTGCTGCTGCAGCTGGTGTTGGTGGCTATCCTGCTGCTGCTCAGC
CCATCAGACAAGACCCCGCGCAGCCTGTTGTATACGCGCAACCTGTCGAG
TCACGGGATGACGGTAAGGAGTACCTACCACTTGGGCAAAGGATAGCCTC
TAGTGAATGAAACTGATGGTGACGGATCCCTCCTCCCCACGCTTACCTTG
CAGAGCCAGAGCCCATGCCTGCATTAGATAAGAGGTGAGCAGCTCAGCCC
TGGCTCTCTTTTGAAAATGTGTAGCTCTAACTGTAACTGACTCTATATTG
CTGTGTTCGATTTCTGAATCTGTGTCTTTCTGAATCTGTATCTTTCTGTA
TATTTAGGGGCCCCCCTCCTGGAGAGCCAGGGACTAGGATCCAAGTGTTG
TGGGAGCTCGATGCAGAAGTGAGTTTGTGTTACGAGAGAAACCGTAAACC
GTGCAAGCGTTTTACCCTCACAGTTTGCCAACTTTCTTTCTTAACAATTG
TGTCGTGTCCTTCTCTCATTTATCAGTTTGTCTGGTGGGGCTGTGAACTC
CTTCACCCTGTAAATGATGGGATGTATGATATTCTCTATGATGTAAGTCT
AAGTCACAACACCCACCTCCTAAATCTGCATGTAACCCAGCTAACCTGGT
CTCAAGTGAGCACCCTAGAGGCAGCAGAGCCAGACTACGCACATCACTCA
ACTGACTCTGCACGCTCATCCCCTTTCCAGGAATTTGAAGAGTTTGAATC
TTGTACGCGCCGGGTGATTTTCAAGTGTAAGTTAAAGTGCCACATAGCTT
TCTTCGTTTGACTTGAGTTGCGCTCACACTATATGTTCTCTTCACTCTGA
GGGCTGACTTATCCTCTGTCCTCCTTGCTAACTAACCCCTGACCACACCT
TGTTTTACTTCCCACAGCTGGAGAGGAGCTGTACGACACTGATGATGAGA
AGACCATGAAGTACAGGCTTGAGCATCTATACCTGGACCTCCCACCTCTG
CCCCAGCAGCAAGAGGCCCAGCAGGCGCAGGCCCAGCCCCAAGAAGGGCA
ACTACCGCAGCAGCCTCAGCAACCCCTGCAACCCCAGCAGCCCCTGCAAG
CTCAGCCCCAAGCAGAGCAGCCACCTCAGCAACCACCTCAGCAACCTCAG
CAACCCCAGGAACCCCTGCACCCAATAGCAGACAACAAGGAGGCGGTAAG
AGAAGAAAGAAAGCATGCCACCTACCTCCCCACCTCAATAGCCAATCATG
ACATAACATCATATGCTTTGTCGCCATATGGTTTGCATAAAAATGACTGC
TTGGCATCACTGCTCAAGGCTAGCTGTGTGGCTAACGTTTCTCTCTCTGT
TGCTTGTTGCTTGTTGCTTGTCTTAGGTTATTCCTCTCACAGAAGTGCTG
CAGGCACAGGAAGCTTACGACCGTGCCAACGAAGTTAGCGCAGACCAAGC
AGCCCAGCTCTTCAACAGCCTTCCCTTCTATCAGCAGCAGCGCATTGCTG
TGGGCTACCGCACCATGGCAGATAAGTTTAAGGACAAGCTACGGGACCTT
GCAGAGTCGAAGCGCACAGATGGGGCCGATCTTGTGGTAACTGAATCTGA
CATACAAGGCATCCTGGCTGAACTTAAGCAGGTGATGGAAGACAAGACAA
AACAAGACCGAACAGCCTAGTAATTGCGTTCCTCTTCACCTCGCTTTTCC
AACCGCTCAGCTCATACCATTGGGTATCAGTACCTCTCAGTAACTCTCGC
TGCTGCTTATCATGGATGATATGTGACACACCCATATCCCTAACTCACTG
ATCCACCTCCGCAGCAGGCTGAGTGTAATCAGGGAGTTGCAGATGCACCT
CAAACTGCCGCTCCATCATCTTCTACCTGATAAACTGATGAAATGGCCAC
ATAGCTGAGTAAGGTGTTCTGGTGCTTAGTAGCTGCATCAATCAAGTCAG
TGATAAGAAAATATAGATACTCAAGTCACTGGGTCAGACTAGCAAGTACA
AGAGTACAAGTAGCAGGGCCTAACTCTAAGGCTCTCAAACTTCACGTGTA
ACATTATTCTTTTGTAAGGGGTTGGGTTGGGTTGGGTTGGGAAGGGAAGG
GAGTTAAACACTTCCGACTGAGTTAATACCCCAGCCCCTAATTCAATATA
GCAACTTCCACCAT back to topCoding sequence (CDS) from alignment at C-australica_Contig_1011:6060..8873- >mRNA_C-australica_Contig_1011.3.3 ID=mRNA_C-australica_Contig_1011.3.3|Name=mRNA_C-australica_Contig_1011.3.3|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1479bp|location=Sequence derived from alignment at C-australica_Contig_1011:6060..8873- (Chrysoparadoxa australica CS_1217)
ATGGAGTCTGGGCAAGCACAAAATGAGGCAAATGTGGTTGCGCCCAATCC
AGAGGTAGCTAGCGTTGTAGCACCCGTCCAGGACACGCCTACTGCGCCGT
CGCCTGCTGCCCCAGCTGAGGCGCCATCTGAGGCCCCACCAGCCTCGGAG
GGAGAGATAGGCGGCGCTCCGCCGGCTACGGAAGCTCCTGCAGCTGCAGA
GGCAGCACCGGCAGCTCCTGTGGAAGCAGTGGCAGCTCCCGCTGAGGCAG
CAGTACCTGGGGGCTACCCAGCAGCTGTAGCTCCTCAGCCGGGCATGGTT
GCCCAACCCCAGCCTGGTATGGTTGCCCAGCCAGGCATGCCTGCCCAGCA
AATGGTATTTCCTGGTATGACTACTCCAGCAACAGCACCAGGTGCGGTCT
ACGGCCAGGCTCCTGCACAGGCACCAACGCAAAATGAAGGCCTGCTCATG
ATGACTGCTGCTGCTGCTGCAGCTGGTGTTGGTGGCTATCCTGCTGCTGC
TCAGCCCATCAGACAAGACCCCGCGCAGCCTGTTGTATACGCGCAACCTG
TCGAGTCACGGGATGACGAGCCAGAGCCCATGCCTGCATTAGATAAGAGG
GGCCCCCCTCCTGGAGAGCCAGGGACTAGGATCCAAGTGTTGTGGGAGCT
CGATGCAGAAGTGAGTTTGTGTTACGAGAGAAACCGTAAACCGTGCAAGC
GTTTTACCCTCACAGTTTGCCAACTTTCTTTCTTAACAATTGTGTCGTGT
CCTTCTCTCATTTATCAGTTTGTCTGGTGGGGCTGTGAACTCCTTCACCC
TGTAAATGATGGGATGTATGATATTCTCTATGATGAATTTGAAGAGTTTG
AATCTTGTACGCGCCGGGTGATTTTCAAGTCTGGAGAGGAGCTGTACGAC
ACTGATGATGAGAAGACCATGAAGTACAGGCTTGAGCATCTATACCTGGA
CCTCCCACCTCTGCCCCAGCAGCAAGAGGCCCAGCAGGCGCAGGCCCAGC
CCCAAGAAGGGCAACTACCGCAGCAGCCTCAGCAACCCCTGCAACCCCAG
CAGCCCCTGCAAGCTCAGCCCCAAGCAGAGCAGCCACCTCAGCAACCACC
TCAGCAACCTCAGCAACCCCAGGAACCCCTGCACCCAATAGCAGACAACA
AGGAGGCGGTTATTCCTCTCACAGAAGTGCTGCAGGCACAGGAAGCTTAC
GACCGTGCCAACGAAGTTAGCGCAGACCAAGCAGCCCAGCTCTTCAACAG
CCTTCCCTTCTATCAGCAGCAGCGCATTGCTGTGGGCTACCGCACCATGG
CAGATAAGTTTAAGGACAAGCTACGGGACCTTGCAGAGTCGAAGCGCACA
GATGGGGCCGATCTTGTGGTAACTGAATCTGACATACAAGGCATCCTGGC
TGAACTTAAGCAGCAGGCTGAGTGTAATCAGGGAGTTGCAGATGCACCTC
AAACTGCCGCTCCATCATCTTCTACCTGA back to top
|