mRNA_C-australica_Contig_10105.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: A0A2D4S987_9GAMM (Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4S987_9GAMM) HSP 1 Score: 169 bits (427), Expect = 6.820e-47 Identity = 91/168 (54.17%), Postives = 108/168 (64.29%), Query Frame = 1 Query: 31 YGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASWG 534 Y A QV LDRR IE GVPGF+LM RAA + F ALRG+WP A L +V GPGNNGGDG L+ L + + V++ GD +R G A +A A AGGV+ D +V VDALLGTGL RPL G FL AV+ +N A GAG+ AVDIP+GLDADTG WG Sbjct: 10 YRAEQVRELDRRFIEVHGVPGFELMQRAAHSAFDALRGQWPGARALGIVAGPGNNGGDGLLVGALALQAGLNVQLSLVGDADRARGAAAQALAAFREAGGVVDSELKLPDHDVDVVVDALLGTGLSRPLEGRFLEAVRLMNSAASAGAGLAAVDIPTGLDADTGRVWG 177
BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: A0A858Q9Q2_9GAMM (Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax=Methylococcus geothermalis TaxID=2681310 RepID=A0A858Q9Q2_9GAMM) HSP 1 Score: 161 bits (407), Expect = 5.600e-44 Identity = 89/171 (52.05%), Postives = 112/171 (65.50%), Query Frame = 1 Query: 22 TRFYGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASWG 534 T + AAQV A+DR I+ G+PG +LMHRA A F ALR RWP+A L+VVCGPGNNGGDG++IA LA+ VR + G ERL GDA A+ A G + + AE+ VDALLGTGL R +AG++ A ++AIN + GV+AVDIPSGL+ADTGA G Sbjct: 11 TSLFTAAQVRAMDRHAIDGLGIPGLELMHRAGTATFAALRRRWPDAKTLSVVCGPGNNGGDGYVIARLALAAGFDVRAYPVGPLERLRGDAAAAFAEYRDAEGPVLNFIPPGFEGAEILVDALLGTGLDRDVAGEYAAVIEAIN---DFPGGVVAVDIPSGLNADTGAVMG 178
BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: UPI001EE8DDBA (NAD(P)H-hydrate dehydratase n=2 Tax=Ectothiorhodospira TaxID=1051 RepID=UPI001EE8DDBA) HSP 1 Score: 160 bits (405), Expect = 1.080e-43 Identity = 91/168 (54.17%), Postives = 113/168 (67.26%), Query Frame = 1 Query: 31 YGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASWG 534 Y AAQV LDRR IE G+PG+ LM RA A LR +WP+A LAV CGPGNNGGDG+++A LA+ ++VRV DP RL G+A RA+Q G L+ +P EAL A+V VD LLGTGL RP+ GD ++ IN+AG+ VLA+DIPSGL+ADTGA G Sbjct: 10 YTAAQVRELDRRAIEGHGIPGYTLMCRAGAAALDRLRRQWPKARTLAVCCGPGNNGGDGYVLARLALAAGLSVRVVAATDPVRLHGEAARAWQDWQACGQPLS-TPDEALEGADVIVDGLLGTGLVRPVEGDMAHLIRCINQAGKP---VLALDIPSGLNADTGAVMG 173
BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: A0A8F6CMV3_METCP (Bifunctional NAD(P)H-hydrate repair enzyme n=4 Tax=Methylococcus capsulatus TaxID=414 RepID=A0A8F6CMV3_METCP) HSP 1 Score: 156 bits (394), Expect = 4.300e-42 Identity = 86/171 (50.29%), Postives = 108/171 (63.16%), Query Frame = 1 Query: 22 TRFYGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASWG 534 T + AAQV A+DR I+ G+PG +LMHRA A F+ALR RWPEA L+VVCGPGNNGGDG++IA LA+ VR + G ERL GD A+ A G L + AE+ VDALLGTGL R + ++ A + A+N + V+AVDIPSGL+ADTGA G Sbjct: 11 TALFTAAQVRAMDRHAIDRLGIPGLELMHRAGAAAFEALRRRWPEAKTLSVVCGPGNNGGDGYVIARLALAAGFDVRAYPVGPVERLRGDGAAAFAEYRNADGPLLNFIPPGFEGAEILVDALLGTGLDRDVTDEYAAVIDAVN---DFPGKVVAVDIPSGLNADTGAVMG 178
BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: A0A423QAZ7_9GAMM (Bifunctional NAD(P)H-hydrate repair enzyme n=2 Tax=Salinisphaera TaxID=180541 RepID=A0A423QAZ7_9GAMM) HSP 1 Score: 155 bits (393), Expect = 6.690e-42 Identity = 83/167 (49.70%), Postives = 111/167 (66.47%), Query Frame = 1 Query: 31 YGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASW 531 Y A+QV+ALD R I+ FGV G++LM RAA A F L W R+ V+CGPGNNGGDGFL+A+ +A+ TV + D + + GDA RA + GG+++ A+ +A+V VDALLGTG+ R + GD A++ IN AG++GAGV AVDIPSG+DA TG W Sbjct: 13 YEASQVSALDARFIDDFGVDGYELMQRAARAAFDELAHYWAMPGRMTVLCGPGNNGGDGFLVASLAMAAGWTVTLESLVDADEIGGDAARAVKRFRETGGLVSPFADTAI-EADVVVDALLGTGVNRDVEGDIARAIERINDAGDRGAGVFAVDIPSGIDATTGHVW 178
BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: A0A8F6CAE6_9GAMM (Multifunctional fusion protein n=2 Tax=unclassified Methylococcus TaxID=2618889 RepID=A0A8F6CAE6_9GAMM) HSP 1 Score: 155 bits (391), Expect = 1.190e-41 Identity = 87/172 (50.58%), Postives = 110/172 (63.95%), Query Frame = 1 Query: 22 TRFYGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINR-AGEQGAGVLAVDIPSGLDADTGASWG 534 T + AAQV A+DR I+ G+PG +LMHRA A F ALR RWP+A L+VVCGPGNNGGDG++IA LA+ VR + G ERL GDA A+ G + + AE+ +DALLGTGL R +AG+ A ++AIN GE V++VDIPSGL+ADTGA G Sbjct: 11 TALFTAAQVRAMDRHAIDGLGIPGLELMHRAGTAAFAALRERWPDAKTLSVVCGPGNNGGDGYVIARLALAAGFDVRAYPVGPVERLRGDAAAAFAEYRDVDGPVLNFIPPGFEGAEILIDALLGTGLDRDVAGECAAVIEAINDFPGE----VVSVDIPSGLNADTGAVMG 178
BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: A0A849UBF3_9GAMM (Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax=Methylococcaceae bacterium TaxID=1933926 RepID=A0A849UBF3_9GAMM) HSP 1 Score: 154 bits (389), Expect = 2.050e-41 Identity = 86/166 (51.81%), Postives = 107/166 (64.46%), Query Frame = 1 Query: 25 RFYGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTG 522 + Y AAQV LDR IE G+PG +LM RA DA FQ+L+ WP+A LAV CG GNNGGDG+++A L + V V+ DPE+L GDA A+Q + AGG + + DA++ VDALLGTGL R + GD+ A+ AIN A VLAVDIPSGL ADTG Sbjct: 7 KLYRAAQVRELDRLAIEEHGIPGIELMTRAGDALFQSLQNHWPQARSLAVFCGAGNNGGDGYIVARLALVAGYQVTVYAVSDPEQLKGDARIAWQQFVDAGGRIVSFNAGLAIDADIIVDALLGTGLDRLVTGDYADAIAAINA---NPAKVLAVDIPSGLHADTG 169
BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: A0A3N1XZJ1_9GAMM (Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax=Inmirania thermothiophila TaxID=1750597 RepID=A0A3N1XZJ1_9GAMM) HSP 1 Score: 154 bits (389), Expect = 2.090e-41 Identity = 90/178 (50.56%), Postives = 113/178 (63.48%), Query Frame = 1 Query: 1 MPALSTITRFYGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASWG 534 M A+ R Y AA+V ALDR IEA G+PG+ LM RA +A ++ L RWP+A ++ V+CG GNN GDG+++A R A VRV +PERL GDA A++A AGG + P + V VDALLGTGL R LAG + AV A+N +G VLA+DIPSGLDADTGA G Sbjct: 1 MEAIDPQLRLYTAAEVRALDRHAIEACGIPGYTLMRRAGEAAWRVLARRWPDAAQVTVLCGAGNNAGDGYVLAARARACGRAVRVMALVEPERLRGDATHAWRAWREAGGGV--EPFDPARLEGVVVDALLGTGLDRDLAGAWAQAVAAVNASGRP---VLALDIPSGLDADTGAVRG 173
BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: H1FZX3_9GAMM (Bifunctional NAD(P)H-hydrate repair enzyme n=2 Tax=Ectothiorhodospira TaxID=1051 RepID=H1FZX3_9GAMM) HSP 1 Score: 154 bits (389), Expect = 2.290e-41 Identity = 89/168 (52.98%), Postives = 110/168 (65.48%), Query Frame = 1 Query: 31 YGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASWG 534 Y AAQV LDRR IE G+PG+ LM RA A LR +WP A LAV CGPGNNGGDG+++A L + ++VRV DP RL G+A RA++ G L+ +P EALA A+V VD LLGTGL R + GD +++INRA VLA+DIPSGL+ADTGA G Sbjct: 10 YTAAQVRELDRRAIEDHGIPGYTLMCRAGAAALDRLRRQWPGARTLAVCCGPGNNGGDGYVLARLALEAGLSVRVVAATDPARLRGEAERAWRDWQACGQPLS-APDEALAAADVIVDGLLGTGLTRAVEGDMARLIRSINRAAGP---VLALDIPSGLNADTGAVMG 173
BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: H5SD93_9GAMM (Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax=uncultured Gammaproteobacteria bacterium TaxID=86473 RepID=H5SD93_9GAMM) HSP 1 Score: 154 bits (388), Expect = 3.050e-41 Identity = 87/168 (51.79%), Postives = 108/168 (64.29%), Query Frame = 1 Query: 31 YGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASWG 534 Y AAQV A+DR IE VPG LM RA A F L+ WP+A +AV+CG GNNGGDG+++A L S + V+V+ PERL+GDA AYQA AGG ++++ L +V VDALLGTGL RP+ G + QAI + E GVLA+DIPSGL ADTGA G Sbjct: 11 YRAAQVRAMDRYAIEHLNVPGSVLMQRAGSAAFAVLQKHWPQAKSIAVLCGGGNNGGDGYILARCALDSGLAVKVFALSPPERLSGDAALAYQAYRAAGGEVSEALPAKLEGFDVVVDALLGTGLDRPVEGRY---AQAIAKIAEFSGGVLAIDIPSGLHADTGAILG 175 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10105.1.1 >prot_C-australica_Contig_10105.1.1 ID=prot_C-australica_Contig_10105.1.1|Name=mRNA_C-australica_Contig_10105.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=178bp MPALSTITRFYGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWback to top mRNA from alignment at C-australica_Contig_10105:1..534- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10105.1.1 ID=mRNA_C-australica_Contig_10105.1.1|Name=mRNA_C-australica_Contig_10105.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=534bp|location=Sequence derived from alignment at C-australica_Contig_10105:1..534- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10105:1..534- >mRNA_C-australica_Contig_10105.1.1 ID=mRNA_C-australica_Contig_10105.1.1|Name=mRNA_C-australica_Contig_10105.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=534bp|location=Sequence derived from alignment at C-australica_Contig_10105:1..534- (Chrysoparadoxa australica CS_1217)back to top |