mRNA_C-australica_Contig_10105.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: A0A2D4S987_9GAMM (Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4S987_9GAMM)

HSP 1 Score: 169 bits (427), Expect = 6.820e-47
Identity = 91/168 (54.17%), Postives = 108/168 (64.29%), Query Frame = 1

Query:   31 YGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASWG 534
            Y A QV  LDRR IE  GVPGF+LM RAA + F ALRG+WP A  L +V GPGNNGGDG L+    L + + V++   GD +R  G A +A  A   AGGV+         D +V VDALLGTGL RPL G FL AV+ +N A   GAG+ AVDIP+GLDADTG  WG
Sbjct:   10 YRAEQVRELDRRFIEVHGVPGFELMQRAAHSAFDALRGQWPGARALGIVAGPGNNGGDGLLVGALALQAGLNVQLSLVGDADRARGAAAQALAAFREAGGVVDSELKLPDHDVDVVVDALLGTGLSRPLEGRFLEAVRLMNSAASAGAGLAAVDIPTGLDADTGRVWG 177

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BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: A0A858Q9Q2_9GAMM (Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax=Methylococcus geothermalis TaxID=2681310 RepID=A0A858Q9Q2_9GAMM)

HSP 1 Score: 161 bits (407), Expect = 5.600e-44
Identity = 89/171 (52.05%), Postives = 112/171 (65.50%), Query Frame = 1

Query:   22 TRFYGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASWG 534
            T  + AAQV A+DR  I+  G+PG +LMHRA  A F ALR RWP+A  L+VVCGPGNNGGDG++IA   LA+   VR +  G  ERL GDA  A+     A G + +        AE+ VDALLGTGL R +AG++ A ++AIN   +   GV+AVDIPSGL+ADTGA  G
Sbjct:   11 TSLFTAAQVRAMDRHAIDGLGIPGLELMHRAGTATFAALRRRWPDAKTLSVVCGPGNNGGDGYVIARLALAAGFDVRAYPVGPLERLRGDAAAAFAEYRDAEGPVLNFIPPGFEGAEILVDALLGTGLDRDVAGEYAAVIEAIN---DFPGGVVAVDIPSGLNADTGAVMG 178

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BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: UPI001EE8DDBA (NAD(P)H-hydrate dehydratase n=2 Tax=Ectothiorhodospira TaxID=1051 RepID=UPI001EE8DDBA)

HSP 1 Score: 160 bits (405), Expect = 1.080e-43
Identity = 91/168 (54.17%), Postives = 113/168 (67.26%), Query Frame = 1

Query:   31 YGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASWG 534
            Y AAQV  LDRR IE  G+PG+ LM RA  A    LR +WP+A  LAV CGPGNNGGDG+++A   LA+ ++VRV    DP RL G+A RA+Q     G  L+ +P EAL  A+V VD LLGTGL RP+ GD    ++ IN+AG+    VLA+DIPSGL+ADTGA  G
Sbjct:   10 YTAAQVRELDRRAIEGHGIPGYTLMCRAGAAALDRLRRQWPKARTLAVCCGPGNNGGDGYVLARLALAAGLSVRVVAATDPVRLHGEAARAWQDWQACGQPLS-TPDEALEGADVIVDGLLGTGLVRPVEGDMAHLIRCINQAGKP---VLALDIPSGLNADTGAVMG 173

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BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: A0A8F6CMV3_METCP (Bifunctional NAD(P)H-hydrate repair enzyme n=4 Tax=Methylococcus capsulatus TaxID=414 RepID=A0A8F6CMV3_METCP)

HSP 1 Score: 156 bits (394), Expect = 4.300e-42
Identity = 86/171 (50.29%), Postives = 108/171 (63.16%), Query Frame = 1

Query:   22 TRFYGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASWG 534
            T  + AAQV A+DR  I+  G+PG +LMHRA  A F+ALR RWPEA  L+VVCGPGNNGGDG++IA   LA+   VR +  G  ERL GD   A+     A G L +        AE+ VDALLGTGL R +  ++ A + A+N   +    V+AVDIPSGL+ADTGA  G
Sbjct:   11 TALFTAAQVRAMDRHAIDRLGIPGLELMHRAGAAAFEALRRRWPEAKTLSVVCGPGNNGGDGYVIARLALAAGFDVRAYPVGPVERLRGDGAAAFAEYRNADGPLLNFIPPGFEGAEILVDALLGTGLDRDVTDEYAAVIDAVN---DFPGKVVAVDIPSGLNADTGAVMG 178

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BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: A0A423QAZ7_9GAMM (Bifunctional NAD(P)H-hydrate repair enzyme n=2 Tax=Salinisphaera TaxID=180541 RepID=A0A423QAZ7_9GAMM)

HSP 1 Score: 155 bits (393), Expect = 6.690e-42
Identity = 83/167 (49.70%), Postives = 111/167 (66.47%), Query Frame = 1

Query:   31 YGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASW 531
            Y A+QV+ALD R I+ FGV G++LM RAA A F  L   W    R+ V+CGPGNNGGDGFL+A+  +A+  TV +    D + + GDA RA +     GG+++     A+ +A+V VDALLGTG+ R + GD   A++ IN AG++GAGV AVDIPSG+DA TG  W
Sbjct:   13 YEASQVSALDARFIDDFGVDGYELMQRAARAAFDELAHYWAMPGRMTVLCGPGNNGGDGFLVASLAMAAGWTVTLESLVDADEIGGDAARAVKRFRETGGLVSPFADTAI-EADVVVDALLGTGVNRDVEGDIARAIERINDAGDRGAGVFAVDIPSGIDATTGHVW 178

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BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: A0A8F6CAE6_9GAMM (Multifunctional fusion protein n=2 Tax=unclassified Methylococcus TaxID=2618889 RepID=A0A8F6CAE6_9GAMM)

HSP 1 Score: 155 bits (391), Expect = 1.190e-41
Identity = 87/172 (50.58%), Postives = 110/172 (63.95%), Query Frame = 1

Query:   22 TRFYGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINR-AGEQGAGVLAVDIPSGLDADTGASWG 534
            T  + AAQV A+DR  I+  G+PG +LMHRA  A F ALR RWP+A  L+VVCGPGNNGGDG++IA   LA+   VR +  G  ERL GDA  A+       G + +        AE+ +DALLGTGL R +AG+  A ++AIN   GE    V++VDIPSGL+ADTGA  G
Sbjct:   11 TALFTAAQVRAMDRHAIDGLGIPGLELMHRAGTAAFAALRERWPDAKTLSVVCGPGNNGGDGYVIARLALAAGFDVRAYPVGPVERLRGDAAAAFAEYRDVDGPVLNFIPPGFEGAEILIDALLGTGLDRDVAGECAAVIEAINDFPGE----VVSVDIPSGLNADTGAVMG 178

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BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: A0A849UBF3_9GAMM (Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax=Methylococcaceae bacterium TaxID=1933926 RepID=A0A849UBF3_9GAMM)

HSP 1 Score: 154 bits (389), Expect = 2.050e-41
Identity = 86/166 (51.81%), Postives = 107/166 (64.46%), Query Frame = 1

Query:   25 RFYGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTG 522
            + Y AAQV  LDR  IE  G+PG +LM RA DA FQ+L+  WP+A  LAV CG GNNGGDG+++A   L +   V V+   DPE+L GDA  A+Q  + AGG +    +    DA++ VDALLGTGL R + GD+  A+ AIN      A VLAVDIPSGL ADTG
Sbjct:    7 KLYRAAQVRELDRLAIEEHGIPGIELMTRAGDALFQSLQNHWPQARSLAVFCGAGNNGGDGYIVARLALVAGYQVTVYAVSDPEQLKGDARIAWQQFVDAGGRIVSFNAGLAIDADIIVDALLGTGLDRLVTGDYADAIAAINA---NPAKVLAVDIPSGLHADTG 169

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BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: A0A3N1XZJ1_9GAMM (Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax=Inmirania thermothiophila TaxID=1750597 RepID=A0A3N1XZJ1_9GAMM)

HSP 1 Score: 154 bits (389), Expect = 2.090e-41
Identity = 90/178 (50.56%), Postives = 113/178 (63.48%), Query Frame = 1

Query:    1 MPALSTITRFYGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASWG 534
            M A+    R Y AA+V ALDR  IEA G+PG+ LM RA +A ++ L  RWP+A ++ V+CG GNN GDG+++A R  A    VRV    +PERL GDA  A++A   AGG +   P +      V VDALLGTGL R LAG +  AV A+N +G     VLA+DIPSGLDADTGA  G
Sbjct:    1 MEAIDPQLRLYTAAEVRALDRHAIEACGIPGYTLMRRAGEAAWRVLARRWPDAAQVTVLCGAGNNAGDGYVLAARARACGRAVRVMALVEPERLRGDATHAWRAWREAGGGV--EPFDPARLEGVVVDALLGTGLDRDLAGAWAQAVAAVNASGRP---VLALDIPSGLDADTGAVRG 173

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BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: H1FZX3_9GAMM (Bifunctional NAD(P)H-hydrate repair enzyme n=2 Tax=Ectothiorhodospira TaxID=1051 RepID=H1FZX3_9GAMM)

HSP 1 Score: 154 bits (389), Expect = 2.290e-41
Identity = 89/168 (52.98%), Postives = 110/168 (65.48%), Query Frame = 1

Query:   31 YGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASWG 534
            Y AAQV  LDRR IE  G+PG+ LM RA  A    LR +WP A  LAV CGPGNNGGDG+++A   L + ++VRV    DP RL G+A RA++     G  L+ +P EALA A+V VD LLGTGL R + GD    +++INRA      VLA+DIPSGL+ADTGA  G
Sbjct:   10 YTAAQVRELDRRAIEDHGIPGYTLMCRAGAAALDRLRRQWPGARTLAVCCGPGNNGGDGYVLARLALEAGLSVRVVAATDPARLRGEAERAWRDWQACGQPLS-APDEALAAADVIVDGLLGTGLTRAVEGDMARLIRSINRAAGP---VLALDIPSGLNADTGAVMG 173

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BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Match: H5SD93_9GAMM (Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax=uncultured Gammaproteobacteria bacterium TaxID=86473 RepID=H5SD93_9GAMM)

HSP 1 Score: 154 bits (388), Expect = 3.050e-41
Identity = 87/168 (51.79%), Postives = 108/168 (64.29%), Query Frame = 1

Query:   31 YGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRWPEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHRAYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAINRAGEQGAGVLAVDIPSGLDADTGASWG 534
            Y AAQV A+DR  IE   VPG  LM RA  A F  L+  WP+A  +AV+CG GNNGGDG+++A   L S + V+V+    PERL+GDA  AYQA   AGG ++++    L   +V VDALLGTGL RP+ G +    QAI +  E   GVLA+DIPSGL ADTGA  G
Sbjct:   11 YRAAQVRAMDRYAIEHLNVPGSVLMQRAGSAAFAVLQKHWPQAKSIAVLCGGGNNGGDGYILARCALDSGLAVKVFALSPPERLSGDAALAYQAYRAAGGEVSEALPAKLEGFDVVVDALLGTGLDRPVEGRY---AQAIAKIAEFSGGVLAIDIPSGLHADTGAILG 175

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_10105.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
A0A2D4S987_9GAMM	6.820e-47	54.17	Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax...	[more]
A0A858Q9Q2_9GAMM	5.600e-44	52.05	Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax...	[more]
UPI001EE8DDBA	1.080e-43	54.17	NAD(P)H-hydrate dehydratase n=2 Tax=Ectothiorhodos...	[more]
A0A8F6CMV3_METCP	4.300e-42	50.29	Bifunctional NAD(P)H-hydrate repair enzyme n=4 Tax...	[more]
A0A423QAZ7_9GAMM	6.690e-42	49.70	Bifunctional NAD(P)H-hydrate repair enzyme n=2 Tax...	[more]
A0A8F6CAE6_9GAMM	1.190e-41	50.58	Multifunctional fusion protein n=2 Tax=unclassifie...	[more]
A0A849UBF3_9GAMM	2.050e-41	51.81	Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax...	[more]
A0A3N1XZJ1_9GAMM	2.090e-41	50.56	Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax...	[more]
H1FZX3_9GAMM	2.290e-41	52.98	Bifunctional NAD(P)H-hydrate repair enzyme n=2 Tax...	[more]
H5SD93_9GAMM	3.050e-41	51.79	Bifunctional NAD(P)H-hydrate repair enzyme n=1 Tax...	[more]

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Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-australica_Contig_10105:1..534-
coding sequence from alignment at C-australica_Contig_10105:1..534-

protein sequence of mRNA_C-australica_Contig_10105.1.1

>prot_C-australica_Contig_10105.1.1 ID=prot_C-australica_Contig_10105.1.1|Name=mRNA_C-australica_Contig_10105.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=178bp
MPALSTITRFYGAAQVAALDRRVIEAFGVPGFDLMHRAADAGFQALRGRW
PEADRLAVVCGPGNNGGDGFLIATRGLASAMTVRVWFPGDPERLTGDAHR
AYQACMRAGGVLTDSPSEALADAEVAVDALLGTGLGRPLAGDFLAAVQAI
NRAGEQGAGVLAVDIPSGLDADTGASWG

mRNA from alignment at C-australica_Contig_10105:1..534-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-australica_Contig_10105.1.1 ID=mRNA_C-australica_Contig_10105.1.1|Name=mRNA_C-australica_Contig_10105.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=534bp|location=Sequence derived from alignment at C-australica_Contig_10105:1..534- (Chrysoparadoxa australica CS_1217)
ATGCCGGCGTTGTCGACCATCACCCGGTTCTACGGCGCCGCCCAGGTGGC
GGCGCTGGATCGTCGCGTGATCGAGGCATTTGGCGTGCCGGGCTTCGACC
TGATGCACCGGGCCGCCGATGCCGGCTTCCAGGCGTTGCGTGGACGCTGG
CCCGAGGCGGACCGCCTGGCCGTGGTCTGCGGCCCCGGCAACAACGGTGG
CGATGGCTTTCTGATCGCCACTCGCGGCCTGGCATCGGCGATGACCGTGC
GCGTCTGGTTCCCGGGCGACCCCGAGCGTCTGACCGGCGATGCGCACCGG
GCTTACCAGGCCTGCATGCGGGCGGGCGGGGTTCTCACGGACAGCCCGTC
CGAGGCGCTGGCCGATGCCGAGGTGGCGGTGGATGCCCTGTTGGGTACCG
GACTGGGGCGGCCGCTGGCCGGTGATTTTCTGGCGGCAGTGCAGGCCATC
AACCGGGCCGGCGAGCAGGGGGCGGGGGTGCTGGCGGTCGACATTCCCTC
GGGCCTGGATGCCGACACCGGCGCGAGCTGGGGT

Coding sequence (CDS) from alignment at C-australica_Contig_10105:1..534-

>mRNA_C-australica_Contig_10105.1.1 ID=mRNA_C-australica_Contig_10105.1.1|Name=mRNA_C-australica_Contig_10105.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=534bp|location=Sequence derived from alignment at C-australica_Contig_10105:1..534- (Chrysoparadoxa australica CS_1217)
ATGCCGGCGTTGTCGACCATCACCCGGTTCTACGGCGCCGCCCAGGTGGC
GGCGCTGGATCGTCGCGTGATCGAGGCATTTGGCGTGCCGGGCTTCGACC
TGATGCACCGGGCCGCCGATGCCGGCTTCCAGGCGTTGCGTGGACGCTGG
CCCGAGGCGGACCGCCTGGCCGTGGTCTGCGGCCCCGGCAACAACGGTGG
CGATGGCTTTCTGATCGCCACTCGCGGCCTGGCATCGGCGATGACCGTGC
GCGTCTGGTTCCCGGGCGACCCCGAGCGTCTGACCGGCGATGCGCACCGG
GCTTACCAGGCCTGCATGCGGGCGGGCGGGGTTCTCACGGACAGCCCGTC
CGAGGCGCTGGCCGATGCCGAGGTGGCGGTGGATGCCCTGTTGGGTACCG
GACTGGGGCGGCCGCTGGCCGGTGATTTTCTGGCGGCAGTGCAGGCCATC
AACCGGGCCGGCGAGCAGGGGGCGGGGGTGCTGGCGGTCGACATTCCCTC
GGGCCTGGATGCCGACACCGGCGCGAGCTGGGGT