Homology
BLAST of mRNA_C-australica_Contig_1010.1.1 vs. uniprot
Match:
A0A8K1FLY0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLY0_PYTOL)
HSP 1 Score: 62.4 bits (150), Expect = 8.820e-7
Identity = 26/57 (45.61%), Postives = 38/57 (66.67%), Query Frame = 3
Query: 879 RDAKEALLCRSENAVEQKSVFLIPCRHLCLCQPCSQHDGMNRCPICREDIEITQIVY 1049
+D K ++C S +KS+ +PCRHLCLCQ CSQH +++CPICR ++ +VY
Sbjct: 857 QDHKLCVICLSN----EKSILCLPCRHLCLCQECSQHQELDKCPICRLGVDNMLLVY 909
BLAST of mRNA_C-australica_Contig_1010.1.1 vs. uniprot
Match:
A0A7S4DHZ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHZ0_HETAK)
HSP 1 Score: 58.9 bits (141), Expect = 1.580e-6
Identity = 25/56 (44.64%), Postives = 39/56 (69.64%), Query Frame = 3
Query: 882 DAKEALLCRSENAVEQKSVFLIPCRHLCLCQPCSQHDGMNRCPICREDIEITQIVY 1049
+ + ++C+ ENA KS+ ++PCRHLCLCQ CS++ + CP+CR DI+ T V+
Sbjct: 148 EQNQCVICQ-ENA---KSILILPCRHLCLCQSCSENPRLKSCPLCRNDIKETLQVF 199
BLAST of mRNA_C-australica_Contig_1010.1.1 vs. uniprot
Match:
A0A7S3H223_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H223_9STRA)
HSP 1 Score: 57.4 bits (137), Expect = 1.600e-6
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 3
Query: 882 DAKEALLCRSE--NAVEQ----------KSVFLIPCRHLCLCQPCSQHDGMNRCPICREDI 1028
+AK+A+L R++ N EQ KSV L+PCRHLC+C CS HD + CP+CRE I
Sbjct: 66 EAKKAVLIRNQIGNQKEQRVCVVCQEHEKSVVLLPCRHLCVCDVCSTHDLLKMCPLCREPI 126
BLAST of mRNA_C-australica_Contig_1010.1.1 vs. uniprot
Match:
A0A485KWE6_9STRA (Aste57867_12514 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWE6_9STRA)
HSP 1 Score: 60.1 bits (144), Expect = 4.310e-6
Identity = 24/68 (35.29%), Postives = 44/68 (64.71%), Query Frame = 3
Query: 846 RRSLFS*EEMPRDAKEALLCRSENAVEQKSVFLIPCRHLCLCQPCSQHDGMNRCPICREDIEITQIVY 1049
R++L E+ ++ K ++C + +K++ +PCRH+C+C+ C+ H+ M RCPICR +IE ++Y
Sbjct: 623 RQALDRQVEVHQELKLCVVCMAT----EKTILCLPCRHVCMCEACANHEQMQRCPICRLEIEEKMLIY 686
BLAST of mRNA_C-australica_Contig_1010.1.1 vs. uniprot
Match:
A0A1V9Z0G8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z0G8_9STRA)
HSP 1 Score: 59.7 bits (143), Expect = 4.960e-6
Identity = 24/60 (40.00%), Postives = 39/60 (65.00%), Query Frame = 3
Query: 870 EMPRDAKEALLCRSENAVEQKSVFLIPCRHLCLCQPCSQHDGMNRCPICREDIEITQIVY 1049
E ++ K ++C S +K++ +PCRH+C+CQ CS H+ + RCPICR +IE ++Y
Sbjct: 473 EEQQELKLCVICLSA----EKTILCLPCRHVCMCQECSNHNEVVRCPICRLEIEEKMVIY 528
BLAST of mRNA_C-australica_Contig_1010.1.1 vs. uniprot
Match:
A0A482S6W3_9ARCH (RING-type domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6W3_9ARCH)
HSP 1 Score: 55.5 bits (132), Expect = 8.030e-6
Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 3
Query: 870 EMPRDAKEALLCRSENAVEQKSVFLIPCRHLCLCQPCSQHDGMNRCPICREDI 1028
E ++ + ++C+ EN +K+V L+PCRHLCLC CS H ++ CP+CRE I
Sbjct: 81 EAQKEQRLCVICQ-EN---EKTVVLLPCRHLCLCDGCSVHSALDMCPLCREAI 129
BLAST of mRNA_C-australica_Contig_1010.1.1 vs. uniprot
Match:
A0A067D9C5_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D9C5_SAPPC)
HSP 1 Score: 58.9 bits (141), Expect = 1.010e-5
Identity = 23/60 (38.33%), Postives = 39/60 (65.00%), Query Frame = 3
Query: 870 EMPRDAKEALLCRSENAVEQKSVFLIPCRHLCLCQPCSQHDGMNRCPICREDIEITQIVY 1049
E+ ++ K ++C + +K++ +PCRH+C+CQ CS H + RCPICR DI+ ++Y
Sbjct: 633 EVQQELKLCVICLTA----EKTILCLPCRHVCMCQACSGHAEVTRCPICRLDIQEKMLIY 688
BLAST of mRNA_C-australica_Contig_1010.1.1 vs. uniprot
Match:
T0S2N8_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S2N8_SAPDV)
HSP 1 Score: 58.9 bits (141), Expect = 1.010e-5
Identity = 23/60 (38.33%), Postives = 39/60 (65.00%), Query Frame = 3
Query: 870 EMPRDAKEALLCRSENAVEQKSVFLIPCRHLCLCQPCSQHDGMNRCPICREDIEITQIVY 1049
E+ ++ K ++C + +K++ +PCRH+C+CQ CS H + RCPICR DI+ ++Y
Sbjct: 636 EVQQELKLCVICLTA----EKTILCLPCRHVCMCQACSGHAEVTRCPICRLDIQEKMLIY 691
BLAST of mRNA_C-australica_Contig_1010.1.1 vs. uniprot
Match:
K3X4I9_GLOUD (RING-type domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4I9_GLOUD)
HSP 1 Score: 58.9 bits (141), Expect = 1.120e-5
Identity = 25/60 (41.67%), Postives = 38/60 (63.33%), Query Frame = 3
Query: 870 EMPRDAKEALLCRSENAVEQKSVFLIPCRHLCLCQPCSQHDGMNRCPICREDIEITQIVY 1049
E ++ K ++C S +KS+ +PCRHLCLC+ CS H+ + +CPICR I+ +VY
Sbjct: 877 EEQQELKLCVICLSN----EKSILCLPCRHLCLCESCSAHEEVEKCPICRLHIDEMLLVY 932
BLAST of mRNA_C-australica_Contig_1010.1.1 vs. uniprot
Match:
A0A7S3XJT7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XJT7_HETAK)
HSP 1 Score: 55.8 bits (133), Expect = 1.270e-5
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 3
Query: 930 KSVFLIPCRHLCLCQPCSQHDGMNRCPICREDIE 1031
KSV ++PCRHLCLCQ CS++ + CP+CRE+IE
Sbjct: 138 KSVLILPCRHLCLCQGCSENQLLRTCPLCRENIE 171
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1010.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 16
0 1 Expect = 8.82e-7 / Id = 45.61 Expect = 1.58e-6 / Id = 44.64 Expect = 1.60e-6 / Id = 47.54 Expect = 4.31e-6 / Id = 35.29 Expect = 4.96e-6 / Id = 40.00 Expect = 8.03e-6 / Id = 45.28 Expect = 1.01e-5 / Id = 38.33 Expect = 1.01e-5 / Id = 38.33 Expect = 1.12e-5 / Id = 41.67 Expect = 1.27e-5 / Id = 61.76 Sequence A0A8K1FLY0_PYTOL A0A7S4DHZ0_HETAK A0A7S3H223_9STRA A0A485KWE6_9STRA A0A1V9Z0G8_9STRA A0A482S6W3_9ARCH A0A067D9C5_SAPPC T0S2N8_SAPDV K3X4I9_GLOUD A0A7S3XJT7_HETAK Pages
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1010.1.1
>prot_C-australica_Contig_1010.1.1 ID=prot_C-australica_Contig_1010.1.1|Name=mRNA_C-australica_Contig_1010.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=62bp
MPRDAKEALLCRSENAVEQKSVFLIPCRHLCLCQPCSQHDGMNRCPICRE back to top mRNA from alignment at C-australica_Contig_1010:381..2033+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1010.1.1 ID=mRNA_C-australica_Contig_1010.1.1|Name=mRNA_C-australica_Contig_1010.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1653bp|location=Sequence derived from alignment at C-australica_Contig_1010:381..2033+ (Chrysoparadoxa australica CS_1217)GGATGAGCATGGGCATGCTGTCAACCGTGCCTTTGGGCTGTCATGCTTTG
TTGAGAGGGACGGAGGGGAGCACACGCCAGAGACCGGAACATAAAATGGA
TGGGCGAGTAATTATTAATTAGGAGAGAGAATACCTTATTCATGCCAGAA
GGGAATGAGCTCGGCTGAAATTGCACTACCTTGTTCTTTGCAGCCCCAGA
GATGATTCAACACGAGCCTTATAGCGAGGGTGCTGATGTCTACAGCTATG
GCATTGTACATTTTCATTTGCTCTGCTCTTGCCTTGTTGGGTTAGGGTTA
GGGCAATAGGCAACTGGCAGCTTGTGTGACTTTGGCACCGTTACCCTTCA
GGGTTACGACCCAGGCTACCTCCTGTTACACCTGATGCATTAGCCAAGCT
GGTGCGAAGTTGCTGGCATGGGGTAGCTAGCCGAAGACCATCCTTTGATC
AG GTGAGAGAGAATACTTGAGTCAAGCAAACAAACTGACCCTCTCCTCGC
CTTGCTCAAGCCCTTTGCTTGATGCATTCACAGACGCATTTACTAAAGCC
TTTGCTATATATGTGCCTTTCTTCCCTCGGATCTGCCAAATGATTCCTGA
CGTGACATTAGTGGCGCAACACAGTGATTTGCCTCAGCAAGGACTGCTTG
GGGGCACACATTCATCAGACAGCCACCTAAACCAGTGCTTGGGCCCGCCG
GCCACAAGCTTGGGACACTATCTTTCAGCTGCTGACAGGGCTTTTGTGAT
TTGTGAAAACAACAAGCAAAAATACTAATATGGTGGCAGCTCTACATGGG
AAGCTGAATACATTGCTTGAATATACCACCATGCTGCCACCTACTGGTGT
AAAATCTCCACCTCTTGCTCCGATGCCTCCTCCTCCTGCTGGTGCTGCTG
GTGCTGCTGGTGCTGCTGTGCTGCCAGGTTAGGCCTTGCTGTCACGCAAG
ATTTGCTTCATGATGCGTGTGACACGCTGCATCATGAACATGACCCTCTT
CTGGCGCCGGTCTTTATTCTCTTAAGAGGAA ATGCCGAGAGATGCAAAGG
AAGCTTTGCTTTGCAGATCAGAAAATGCAGTTGAGCAGAAGAGTGTGTTC
CTCATCCCCTGCAG GTAGCTGCCTGAGAGAACAAGCCCTATAGAGTAGCC
ACAGCTTAGCTAACCAATAGATACCCAAGTATATAACCCACGTGAAGTCC
TAGCAAGCTCCCTGTCTTCCCTGCAGACACTTATGTTTATGCCAGCCCTG
CTCTCAGCATGATGGCATGAACAGATGTCCAATCTGCAG GTAGCTCTGGT
CTTTTGAGCCCACCTCCTGAACAGCTCAACCACCCTCAATAGCTCACTCA
TTCAAACTGTGGTGAGCCTCGCTCGCCTCATCATTTCCCCTATAATCGCA
GCCGTATCAAACCATCTCCTATCTCTCTTGCCATTCACCTCTAATCTAAC
ACTAACCCTTCCCTTACCCTTTTACCCTCACCCTTAGGGAAGATATTGAG
ATTACTCAGATTGTATACATCAGCTGA GGAATGTGAGGCCCCTGCAAAGG
GAGTATTATAGCTACCAACTGAATCAAGACCTTTATTGAAGAGTTTGGAG
CTTTCATTTACATCAGGATCAAGAGTTGAGGGTGTTGTGGTACCACCTCT
CAG back to top Coding sequence (CDS) from alignment at C-australica_Contig_1010:381..2033+
>mRNA_C-australica_Contig_1010.1.1 ID=mRNA_C-australica_Contig_1010.1.1|Name=mRNA_C-australica_Contig_1010.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=186bp|location=Sequence derived from alignment at C-australica_Contig_1010:381..2033+ (Chrysoparadoxa australica CS_1217) back to top