Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1167 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Cds size | 936 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586741.3822727-UTR-C-australica_Contig_1008:4302..4444 | 1682586741.3822727-UTR-C-australica_Contig_1008:4302..4444 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1008 4303..4444 + |
| 1682586741.4599664-UTR-C-australica_Contig_1008:6281..6370 | 1682586741.4599664-UTR-C-australica_Contig_1008:6281..6370 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1008 6282..6370 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586741.3935068-CDS-C-australica_Contig_1008:4444..4517 | 1682586741.3935068-CDS-C-australica_Contig_1008:4444..4517 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1008 4445..4517 + |
| 1682586741.4009979-CDS-C-australica_Contig_1008:4602..4768 | 1682586741.4009979-CDS-C-australica_Contig_1008:4602..4768 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1008 4603..4768 + |
| 1682586741.4084554-CDS-C-australica_Contig_1008:4852..4931 | 1682586741.4084554-CDS-C-australica_Contig_1008:4852..4931 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1008 4853..4931 + |
| 1682586741.4160485-CDS-C-australica_Contig_1008:5031..5129 | 1682586741.4160485-CDS-C-australica_Contig_1008:5031..5129 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1008 5032..5129 + |
| 1682586741.4243581-CDS-C-australica_Contig_1008:5427..5538 | 1682586741.4243581-CDS-C-australica_Contig_1008:5427..5538 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1008 5428..5538 + |
| 1682586741.4330084-CDS-C-australica_Contig_1008:5611..5749 | 1682586741.4330084-CDS-C-australica_Contig_1008:5611..5749 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1008 5612..5749 + |
| 1682586741.4418569-CDS-C-australica_Contig_1008:5936..6079 | 1682586741.4418569-CDS-C-australica_Contig_1008:5936..6079 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1008 5937..6079 + |
| 1682586741.4508417-CDS-C-australica_Contig_1008:6153..6281 | 1682586741.4508417-CDS-C-australica_Contig_1008:6153..6281 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1008 6154..6281 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1008.1.1 >prot_C-australica_Contig_1008.1.1 ID=prot_C-australica_Contig_1008.1.1|Name=mRNA_C-australica_Contig_1008.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=312bp
MKGLEVDTGAAAPTHRQIMSGTVLNIGSPRAAQRMGDLIPHFDDNEEGGS
GTHDRLAKLLQDKRSMEVARMPLGALPVQWNNVTFDGTSRAVPDHVNLML
ELILSKGIMVKKFARNYPYKPQTRRLMLASSPAQILLARPNQLVINRNLK
HINVTDIEQLQLGSAMTLPRTQVFERSSNHVTCGDCTLALLGKGNTRSLD
LEMPSMLDRDELANALALFIDRSRPRIASPSQGGDVKRASRAAWAQVQGS
DTAARKHLSFAAGPLSPTPGYAQGECMTDVESTPIDKSPRDEPTGAKGVR
LFFPDTPDDKG* back to topmRNA from alignment at C-australica_Contig_1008:4303..6370+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_1008.1.1 ID=mRNA_C-australica_Contig_1008.1.1|Name=mRNA_C-australica_Contig_1008.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2068bp|location=Sequence derived from alignment at C-australica_Contig_1008:4303..6370+ (Chrysoparadoxa australica CS_1217)
GTTCAAGTTGGGCGCGTCAAGAATCCCTCGCTCTCTTCCCATCCTCCCAT
TTCCCCAATAGCTCTCATTTCATCATTTCTTTTTCTACTTAACGCGTCTT
TAAAGCCAAGAACTAAGCTCTTACCAAGGGCGAGGGGGCAATATGAAGGG
CCTGGAGGTAGACACAGGGGCGGCAGCCCCTACTCACAGGCAGATCATGA
GCGGAACCGTCCTAAGTGAGTTTCGCCCCCTTCTTCTCTTCAGACCGCCT
CCATCCATGCACCTCCACATACCCCCTCAACCTCCAGCTCTTTTGCCCAG
ATATCGGCTCTCCGAGGGCTGCCCAGAGGATGGGTGACCTGATCCCGCAC
TTTGATGACAACGAGGAGGGTGGAAGTGGTACGCATGACAGGCTCGCCAA
GCTGCTGCAAGATAAGAGATCAATGGAAGTGGCAAGAATGCCGCTGGGAG
CTCTGCCCGTACAGTGGTGGGTGAAAAACTGATACCGCCATGAGCGAGTC
AAGTCCCACTACCCTCTCACCCATACATTCCTTTGGCTTTGTGCCCTTAG
GAATAATGTCACCTTTGACGGCACCAGCAGAGCTGTCCCTGACCACGTCA
ACCTCATGCTGGAGTTGATACTCAGCAAGGCAAGCACAAGCTTCAATACT
TGAGCGTGCCTTCATTTGACTTTGACATTAATCGCCTGGCCTTGAAAAGC
CTAATATTCACCCTGCCAAACTATGCCAGGGCATTATGGTGAAGAAATTT
GCGCGCAACTACCCCTACAAGCCCCAGACCCGGCGGCTCATGCTGGCCTC
CTCACCGGCACAAATACTACTCGCAAGGTGTGGGACGCCTAGGTCACCCT
CCACCAGTAGTAGATGGATCCCATGCTCTCCCACGCTACCAGATAGAACC
TGGTTGGATCGGTTTACATGTCACGAGCCCTGCCATTCTTCTACTCAAGC
CTGCCTTTACACATACCAGTACCACTGGTCATAACTAGGTCTTGCATGTA
GCGCCCTTGCCACAACCGTGGACACTGCTCCCTCCTCACTCAACTACAAT
TCCAGATGCCGCTCCGGCGTCCCACTGCTTGCTGCACCTCTAGCTCATTG
CACTGATTCTCTCATTGCCCCCCAGGCCCAACCAGTTGGTGATAAACCGC
AATCTAAAGCACATCAACGTCACTGATATTGAGCAGCTGCAGCTCGGATC
GGCAATGACACTGCCTAGAACGCAAGTGTTTGAGAGGTAAGCTCCCACAG
TTCAAAGTCCAAATCATGGTGCCCAACCCCTCACTACATTATGATACCCT
ACCCCTCAGAAGCTCAAACCATGTGACTTGTGGTGACTGCACGCTTGCAC
TGTTGGGCAAGGGGAACACACGTTCATTGGACCTGGAGATGCCCTCCATG
CTAGACAGGGATGAGCTTGCCAACGCATTGGCATTGTTCATTGACAGGTA
TGTGCGCCTTTTGCTGCTTCTGTCGGATCCAACTGCTCACCTGGGACCAG
CAAAGAAGTAGCATGGCCGCAAGGCAGCCCATACAAACTCAAGCAAACTG
CTGGAGAGGAGCAGCTCTTGGCTTTGGAGCACCGCTTCTCTCACCGCTGG
CACTACAATAAAGCCTTGCCTGGCCCGCCTCCAGATCAAGGCCGAGGATT
GCATCACCTTCGCAGGGAGGCGACGTCAAGCGAGCGAGCAGGGCAGCATG
GGCACAGGTGCAAGGAAGTGACACGGCTGCAAGGAAGCACCTGTCATTCG
CGGCTGGACCTTTATCGCCAACGCCAGGTGAGCTTCACTGATCAGCTCTG
CACCTTGGCGGTCTCACTGCTCAGTCTTATGACCTCTTTCATTCACTGCA
GGGTATGCGCAAGGGGAATGCATGACTGATGTGGAGTCAACGCCTATAGA
TAAATCGCCACGAGACGAGCCCACTGGAGCGAAAGGGGTGCGGCTATTCT
TCCCAGACACCCCGGATGACAAAGGCTAAGGCTCTGGATGAGTTGATGGC
GTGTGGGTGTGTCATCACGGGTGGCACCTTGGTATGGGAAGCTCAAGCTG
TATCATGTATAGAGTAGC back to topCoding sequence (CDS) from alignment at C-australica_Contig_1008:4303..6370+ >mRNA_C-australica_Contig_1008.1.1 ID=mRNA_C-australica_Contig_1008.1.1|Name=mRNA_C-australica_Contig_1008.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=936bp|location=Sequence derived from alignment at C-australica_Contig_1008:4303..6370+ (Chrysoparadoxa australica CS_1217)
ATGAAGGGCCTGGAGGTAGACACAGGGGCGGCAGCCCCTACTCACAGGCA
GATCATGAGCGGAACCGTCCTAAATATCGGCTCTCCGAGGGCTGCCCAGA
GGATGGGTGACCTGATCCCGCACTTTGATGACAACGAGGAGGGTGGAAGT
GGTACGCATGACAGGCTCGCCAAGCTGCTGCAAGATAAGAGATCAATGGA
AGTGGCAAGAATGCCGCTGGGAGCTCTGCCCGTACAGTGGAATAATGTCA
CCTTTGACGGCACCAGCAGAGCTGTCCCTGACCACGTCAACCTCATGCTG
GAGTTGATACTCAGCAAGGGCATTATGGTGAAGAAATTTGCGCGCAACTA
CCCCTACAAGCCCCAGACCCGGCGGCTCATGCTGGCCTCCTCACCGGCAC
AAATACTACTCGCAAGGCCCAACCAGTTGGTGATAAACCGCAATCTAAAG
CACATCAACGTCACTGATATTGAGCAGCTGCAGCTCGGATCGGCAATGAC
ACTGCCTAGAACGCAAGTGTTTGAGAGAAGCTCAAACCATGTGACTTGTG
GTGACTGCACGCTTGCACTGTTGGGCAAGGGGAACACACGTTCATTGGAC
CTGGAGATGCCCTCCATGCTAGACAGGGATGAGCTTGCCAACGCATTGGC
ATTGTTCATTGACAGATCAAGGCCGAGGATTGCATCACCTTCGCAGGGAG
GCGACGTCAAGCGAGCGAGCAGGGCAGCATGGGCACAGGTGCAAGGAAGT
GACACGGCTGCAAGGAAGCACCTGTCATTCGCGGCTGGACCTTTATCGCC
AACGCCAGGGTATGCGCAAGGGGAATGCATGACTGATGTGGAGTCAACGC
CTATAGATAAATCGCCACGAGACGAGCCCACTGGAGCGAAAGGGGTGCGG
CTATTCTTCCCAGACACCCCGGATGACAAAGGCTAA back to top
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