Homology
BLAST of mRNA_C-australica_Contig_10052.2.1 vs. uniprot
Match:
UPI001FF64235 (hypothetical protein n=1 Tax=Qipengyuania sp. S6317L1 TaxID=2926410 RepID=UPI001FF64235)
HSP 1 Score: 119 bits (298), Expect = 1.590e-27
Identity = 173/198 (87.37%), Postives = 175/198 (88.38%), Query Frame = -2
Query: 3 VDEDELLELDEELELEDEPPLXXXXXXXXXXXELLLEELELPXXXXXXXXXXXXXXXXXXXXXXDEELEHDXXEEDDELEPPVVEPPGSGSPPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEVEVVEPPEEDELLXXXXXXXXXXXLDEEPPPVLVLDTLPDVLEMLPEVXXXXXXXXXXXXVLVLE 596
+DEDELLELDEELELED XXXXXXXXXXXELLLEELELPXXXXXXXXX XXXXXXXXXX DEELE XX PPVVEPPG GSPPLLXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXLEVEVVEPPEEDELLXXXXXXXXXXXLDEEPPPVLVLDTLPDVLEMLPEVXXXXXXXXXX VLVL+
Sbjct: 155 LDEDELLELDEELELEDXXXXXXXXXXXXXXXELLLEELELPXXXXXXXXXLLXXXXXXXXXXDDEELEXXXXXXXXXXXPPVVEPPGCGSPPLLXXXXXXXXXXXXXXXXXXXXXXXXXEELEXXXXXXXLEVEVVEPPEEDELLXXXXXXXXXXXLDEEPPPVLVLDTLPDVLEMLPEVXXXXXXXXXXVEVLVLD 352
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10052.2.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 1
0 1 Expect = 1.59e-27 / Id = 87.37 Sequence UPI001FF64235
Match Name E-value Identity Description
UPI001FF64235 1.590e-27 87.37 hypothetical protein n=1 Tax=Qipengyuania sp. S631... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 0 Model size 693 Hectar predicted targeting category other localisation Exons 1 Cds size 693
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586739.632627-CDS-C-australica_Contig_10052:1..694 1682586739.632627-CDS-C-australica_Contig_10052:1..694 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_10052 2..694 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10052.2.1
>prot_C-australica_Contig_10052.2.1 ID=prot_C-australica_Contig_10052.2.1|Name=mRNA_C-australica_Contig_10052.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=231bp
VSSTSTSTTSGNVSSTSTTSGNISSTSGNVSSTSTGGGSSSSSSSSSSSS back to top mRNA from alignment at C-australica_Contig_10052:2..694-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10052.2.1 ID=mRNA_C-australica_Contig_10052.2.1|Name=mRNA_C-australica_Contig_10052.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=693bp|location=Sequence derived from alignment at C-australica_Contig_10052:2..694- (Chrysoparadoxa australica CS_1217)GTCTCAAGCACCAGCACCTCGACGACTTCGGGCAATGTATCGAGCACGAG
CACGACCTCGGGCAACATTTCCAGCACGTCAGGCAATGTGTCGAGCACCA
GCACGGGTGGCGGTTCCTCGTCGAGCTCCAGCTCTTCGTCTTCAAGCAGC
TCTTCCTCGAGCAGCTCGTCTTCTTCGGGCGGTTCGACCACTTCGACTTC
AAGCGGCGGTTCCGGTTCGTCCGGTTCAAGCTCTTCAGGCGGAAGTTCTT
CGTCATCGAGCTCCAGCTCAAGTTCCAGCAGCTCGTCGTCGTCGAGCGGC
GGCTCGGGCGGCAGCAATGGCGGTGACCCACTTCCGGGAGGTTCGACTAC
GGGCGGTTCAAGCTCGTCGTCTTCTTCTAGCTCGTCGTGCTCCAGCTCTT
CGTCATCAAGCGGCGGTTCGAACGGTGGTTCCGGCGGCAGCAATGGTGGT
TCATCAAGCTCGTCATCGAGCGGCAGCTCAAGCTCTTCAAGCAGCAGTTC
GGGCGGCTCCAACGGTGGGTCGAACGGGGGCTCCAATGGCGGCTCGTCTT
CGAGCTCCAGTTCCTCATCGAGCTCGAGCAGTTCGTCTTCGTCTACCGCC
GCCACCAATACCCGCGCGAACGGCGGCGCAAAAGGCTGCACATCAAGCAC
CACCACCAACGGCAGGTCCAGGGCGACAAAAAACAGATCATGA back to top Coding sequence (CDS) from alignment at C-australica_Contig_10052:2..694-
>mRNA_C-australica_Contig_10052.2.1 ID=mRNA_C-australica_Contig_10052.2.1|Name=mRNA_C-australica_Contig_10052.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=693bp|location=Sequence derived from alignment at C-australica_Contig_10052:2..694- (Chrysoparadoxa australica CS_1217) back to top