mRNA_C-australica_Contig_10052.2.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10052.2.1 vs. uniprot
Match: UPI001FF64235 (hypothetical protein n=1 Tax=Qipengyuania sp. S6317L1 TaxID=2926410 RepID=UPI001FF64235) HSP 1 Score: 119 bits (298), Expect = 1.590e-27 Identity = 173/198 (87.37%), Postives = 175/198 (88.38%), Query Frame = -2 Query: 3 VDEDELLELDEELELEDEPPLXXXXXXXXXXXELLLEELELPXXXXXXXXXXXXXXXXXXXXXXDEELEHDXXEEDDELEPPVVEPPGSGSPPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEVEVVEPPEEDELLXXXXXXXXXXXLDEEPPPVLVLDTLPDVLEMLPEVXXXXXXXXXXXXVLVLE 596
+DEDELLELDEELELED XXXXXXXXXXXELLLEELELPXXXXXXXXX XXXXXXXXXX DEELE XX PPVVEPPG GSPPLLXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXLEVEVVEPPEEDELLXXXXXXXXXXXLDEEPPPVLVLDTLPDVLEMLPEVXXXXXXXXXX VLVL+
Sbjct: 155 LDEDELLELDEELELEDXXXXXXXXXXXXXXXELLLEELELPXXXXXXXXXLLXXXXXXXXXXDDEELEXXXXXXXXXXXPPVVEPPGCGSPPLLXXXXXXXXXXXXXXXXXXXXXXXXXEELEXXXXXXXLEVEVVEPPEEDELLXXXXXXXXXXXLDEEPPPVLVLDTLPDVLEMLPEVXXXXXXXXXXVEVLVLD 352 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10052.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10052.2.1 >prot_C-australica_Contig_10052.2.1 ID=prot_C-australica_Contig_10052.2.1|Name=mRNA_C-australica_Contig_10052.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=231bp VSSTSTSTTSGNVSSTSTTSGNISSTSGNVSSTSTGGGSSSSSSSSSSSSback to top mRNA from alignment at C-australica_Contig_10052:2..694- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10052.2.1 ID=mRNA_C-australica_Contig_10052.2.1|Name=mRNA_C-australica_Contig_10052.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=693bp|location=Sequence derived from alignment at C-australica_Contig_10052:2..694- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10052:2..694- >mRNA_C-australica_Contig_10052.2.1 ID=mRNA_C-australica_Contig_10052.2.1|Name=mRNA_C-australica_Contig_10052.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=693bp|location=Sequence derived from alignment at C-australica_Contig_10052:2..694- (Chrysoparadoxa australica CS_1217)back to top |