Homology
BLAST of mRNA_C-australica_Contig_10034.1.1 vs. uniprot
Match:
UPI001C08E756 (enoyl-CoA hydratase/isomerase family protein n=1 Tax=Roseovarius nubinhibens TaxID=314263 RepID=UPI001C08E756)
HSP 1 Score: 501 bits (1291), Expect = 2.670e-178
Identity = 248/280 (88.57%), Postives = 264/280 (94.29%), Query Frame = 1
Query: 1 VDGHGIAEMCWDDPYLKGNVFSTEAIAEWVALVEQVASDPSVRGVLITSGKASFHAGADLSMVSGFFGMSTEDLWSVMARVKDSLYRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWQRVTADMLQGATYDVSQARSLGQLTDVVPAGALRDAARRWLLDNPAAEQPWMARGYRGPSASEIERYFHALNAGLTRDGMADRPEQKLIAEAVYHGLQMPIEPALRLEVRRFIELTRNLSVRQTLQAR 840
VDGHGIAE+ WDDP K NVFSTEAIA+W ALV+++ASD +RGVLITSGK SFHAGADL MV GFF MS EDLWSVMARVKDSLYRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWQ+VTADMLQGATYDVS+A+SLG LTDVVPAGALRDAARRWLLD+P AEQPWMARGYRGPSA+E+ER+FHALNAGLTRDG+ADRPEQ+LIAEAVYHGLQMPIEPALRLEVRRFIELTR+ SVR TLQAR
Sbjct: 9 VDGHGIAELSWDDPDRKVNVFSTEAIAQWAALVDELASDTDIRGVLITSGKPSFHAGADLRMVGGFFDMSAEDLWSVMARVKDSLYRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWQKVTADMLQGATYDVSEAKSLGLLTDVVPAGALRDAARRWLLDSPNAEQPWMARGYRGPSAAELERHFHALNAGLTRDGVADRPEQRLIAEAVYHGLQMPIEPALRLEVRRFIELTRDPSVRHTLQAR 288
BLAST of mRNA_C-australica_Contig_10034.1.1 vs. uniprot
Match:
A0A222E2Q4_9RHOB (Fatty acid oxidation complex subunit alpha n=3 Tax=Rhodobacterales TaxID=204455 RepID=A0A222E2Q4_9RHOB)
HSP 1 Score: 500 bits (1288), Expect = 7.640e-178
Identity = 250/280 (89.29%), Postives = 261/280 (93.21%), Query Frame = 1
Query: 1 VDGHGIAEMCWDDPYLKGNVFSTEAIAEWVALVEQVASDPSVRGVLITSGKASFHAGADLSMVSGFFGMSTEDLWSVMARVKDSLYRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWQRVTADMLQGATYDVSQARSLGQLTDVVPAGALRDAARRWLLDNPAAEQPWMARGYRGPSASEIERYFHALNAGLTRDGMADRPEQKLIAEAVYHGLQMPIEPALRLEVRRFIELTRNLSVRQTLQAR 840
VDGHGIAE+ WDDP K NVFST+AI+EWV LV+QVASDPSVRGVLITSGKASFHAGADL MV FF + EDLWSVMARVKDSLYRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLM GFGGTQRLTRLAPWQRVT DMLQG TYDVS+ARSLG LTDVVPAGALRDAARRWLLDNPAAEQ WM RGYRGP+A EIERYFHALNAGLTRDG+A+RPEQ+LIAEA+YHGLQMPIEPALRLEVRRFIELTRN SVRQTLQAR
Sbjct: 9 VDGHGIAELRWDDPDRKVNVFSTDAISEWVGLVDQVASDPSVRGVLITSGKASFHAGADLRMVGEFFDIPAEDLWSVMARVKDSLYRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMTGFGGTQRLTRLAPWQRVTGDMLQGTTYDVSEARSLGLLTDVVPAGALRDAARRWLLDNPAAEQRWMVRGYRGPTAPEIERYFHALNAGLTRDGVAERPEQRLIAEAIYHGLQMPIEPALRLEVRRFIELTRNPSVRQTLQAR 288
BLAST of mRNA_C-australica_Contig_10034.1.1 vs. uniprot
Match:
A0A231V1U6_9HYPH (Uncharacterized protein n=1 Tax=Notoacmeibacter marinus TaxID=1876515 RepID=A0A231V1U6_9HYPH)
HSP 1 Score: 477 bits (1227), Expect = 1.500e-168
Identity = 234/280 (83.57%), Postives = 252/280 (90.00%), Query Frame = 1
Query: 1 VDGHGIAEMCWDDPYLKGNVFSTEAIAEWVALVEQVASDPSVRGVLITSGKASFHAGADLSMVSGFFGMSTEDLWSVMARVKDSLYRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWQRVTADMLQGATYDVSQARSLGQLTDVVPAGALRDAARRWLLDNPAAEQPWMARGYRGPSASEIERYFHALNAGLTRDGMADRPEQKLIAEAVYHGLQMPIEPALRLEVRRFIELTRNLSVRQTLQAR 840
VDGHGIAE+CW DP K NVFS EAI+EW A+VEQVA DP++RGVLITSGK SFHAGADL MV GF MS E+LW+VMARVKDS YRLETCGKPVAAAINGHCLGGGFEMAL+ HARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPW+RVT DML G TYDVS+ARSLG LTD+VP ALRD ARRWLLDN AA QPWMARGYRGP+A +IE++FHALNAGLTRDG+ADRPEQ+LIAEAVYHGLQMPIEPALRLEVRRF+ELTR SVRQ LQAR
Sbjct: 9 VDGHGIAELCWADPDRKVNVFSAEAISEWAAMVEQVAFDPAIRGVLITSGKPSFHAGADLRMVGGFSDMSVEELWTVMARVKDSFYRLETCGKPVAAAINGHCLGGGFEMALSTHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWRRVTPDMLHGVTYDVSEARSLGLLTDIVPEDALRDVARRWLLDNSAAHQPWMARGYRGPAAPDIEQFFHALNAGLTRDGVADRPEQRLIAEAVYHGLQMPIEPALRLEVRRFVELTRIPSVRQALQAR 288
BLAST of mRNA_C-australica_Contig_10034.1.1 vs. uniprot
Match:
UPI0009801A64 (enoyl-CoA hydratase/isomerase family protein n=1 Tax=Roseibium aggregatum TaxID=187304 RepID=UPI0009801A64)
HSP 1 Score: 423 bits (1088), Expect = 2.190e-147
Identity = 206/280 (73.57%), Postives = 232/280 (82.86%), Query Frame = 1
Query: 1 VDGHGIAEMCWDDPYLKGNVFSTEAIAEWVALVEQVASDPSVRGVLITSGKASFHAGADLSMVSGFFGMSTEDLWSVMARVKDSLYRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWQRVTADMLQGATYDVSQARSLGQLTDVVPAGALRDAARRWLLDNPAAEQPWMARGYRGPSASEIERYFHALNAGLTRDGMADRPEQKLIAEAVYHGLQMPIEPALRLEVRRFIELTRNLSVRQTLQAR 840
D +GIAE+ WDDP K NVFS EAI EWV LVE+VA D ++ GVL+TSGK+ FHAGADL M+ GFF M+ +DLWSVMAR+KDS YRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVD PA K+GLPEAGLGLMPGFGGTQR+TRLAPWQR DML GATYDV+ A+SLG + +VV ALRD A WLL NP A+QPWM RGYRGP + ER+FH LNAGL RDG+ RPEQ+LIAEAVYHGLQMPIEPALRLEVRRFIEL + SV++T+Q R
Sbjct: 9 TDAYGIAELYWDDPQRKVNVFSAEAIQEWVTLVERVAVDDTIHGVLLTSGKSMFHAGADLRMIGGFFDMTPKDLWSVMARIKDSFYRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVDVPAAKIGLPEAGLGLMPGFGGTQRMTRLAPWQRAVEDMLAGATYDVTTAKSLGLVREVVSPDALRDTAHAWLLANPEAQQPWMVRGYRGPGGATFERFFHKLNAGLIRDGVEGRPEQRLIAEAVYHGLQMPIEPALRLEVRRFIELVQIPSVKETMQRR 288
BLAST of mRNA_C-australica_Contig_10034.1.1 vs. uniprot
Match:
A0A418ZYD0_9RHOB (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Paracoccus aestuarii TaxID=453842 RepID=A0A418ZYD0_9RHOB)
HSP 1 Score: 358 bits (918), Expect = 1.640e-121
Identity = 179/281 (63.70%), Postives = 212/281 (75.44%), Query Frame = 1
Query: 1 VDGHGIAEMCWDDPYLKGNVFSTEAIAEWVALVEQVASDPSVRGVLITSGKASFHAGADLSMVSGFFGMSTEDLWSVMARVKDSLYRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWQRVTADMLQGATYDVSQARSLGQLTDVVPAGALRDAARRWLLDNPAAEQPWMARGYRGP-SASEIERYFHALNAGLTRDGMADRPEQKLIAEAVYHGLQMPIEPALRLEVRRFIELTRNLSVRQTLQAR 840
VD GIAE+ WDDP K NVFS IAE+ A+V ++ D ++RGVLITSGK SFHAGADL+MVSGFF MS DLW +M+ V S YRLETCGKPV AA+NGHCLGGGFEMALAAHARF DDP I++GLPEAGLGLMPGFGGTQR+ R+APW++ D+++G +D A SLG + VVPA L AAR WL A+QPW RGYR P +A++ E+YF ALNA L RDG ADRPE++LIAE +YHGLQ+PIEPALR EVR FIEL VR T++ R
Sbjct: 9 VDAEGIAELRWDDPARKVNVFSAAEIAEFAAIVTRIRDDNAIRGVLITSGKGSFHAGADLNMVSGFFDMSAADLWEIMSLVMTSFYRLETCGKPVVAALNGHCLGGGFEMALAAHARFVADDPRIRIGLPEAGLGLMPGFGGTQRMARIAPWKQAAEDIMEGRCHDPQTALSLGLVGGVVPADGLEAAARDWLWCTCEAKQPWAVRGYRPPGAAADFEQYFTALNAALIRDGAADRPERRLIAETLYHGLQLPIEPALRHEVRCFIELAGMPDVRSTMRQR 289
BLAST of mRNA_C-australica_Contig_10034.1.1 vs. uniprot
Match:
A0A348WDB0_9RHOB (3-hydroxyacyl-CoA dehydrogenase (Fragment) n=1 Tax=Roseovarius nubinhibens TaxID=314263 RepID=A0A348WDB0_9RHOB)
HSP 1 Score: 348 bits (892), Expect = 4.010e-119
Identity = 174/186 (93.55%), Postives = 181/186 (97.31%), Query Frame = 1
Query: 283 VAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWQRVTADMLQGATYDVSQARSLGQLTDVVPAGALRDAARRWLLDNPAAEQPWMARGYRGPSASEIERYFHALNAGLTRDGMADRPEQKLIAEAVYHGLQMPIEPALRLEVRRFIELTRNLSVRQTLQAR 840
VAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWQRVTADMLQGATYDVS+A+SLG LTDVVPAGALRDAARRWLLD+P AEQPWMARGYRGPSA+EIER+FHALNAGLTRDG+A RPEQKLIAEAVYHGLQMPIEPALRLEVRRFIELTR+ SVR TLQAR
Sbjct: 1 VAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWQRVTADMLQGATYDVSEAKSLGLLTDVVPAGALRDAARRWLLDSPNAEQPWMARGYRGPSAAEIERHFHALNAGLTRDGVAGRPEQKLIAEAVYHGLQMPIEPALRLEVRRFIELTRDPSVRHTLQAR 186
BLAST of mRNA_C-australica_Contig_10034.1.1 vs. uniprot
Match:
UPI00065C9CA9 (enoyl-CoA hydratase/isomerase family protein n=1 Tax=Sphingomonas sp. MEA3-1 TaxID=1647414 RepID=UPI00065C9CA9)
HSP 1 Score: 350 bits (898), Expect = 2.060e-118
Identity = 175/281 (62.28%), Postives = 212/281 (75.44%), Query Frame = 1
Query: 1 VDGHGIAEMCWDDPYLKGNVFSTEAIAEWVALVEQVASDPSVRGVLITSGKASFHAGADLSMVSGFFGMSTEDLWSVMARVKDSLYRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWQRVTADMLQGATYDVSQARSLGQLTDVVPAGALRDAARRWLLDNPAAEQPWMARGYRGPSASE-IERYFHALNAGLTRDGMADRPEQKLIAEAVYHGLQMPIEPALRLEVRRFIELTRNLSVRQTLQAR 840
VD GIAE+ WD+P K NVFS EAI ++ ALV ++ SD S+RGV+ITSGK+ FHAGADL+MVSGFF +S +LW +M+++ S Y+LETCGKPV AA+NGHCLGGGFEMALAAHARFAVDDP I++GLPEAGLGLMPGFGGTQR+ R+APWQ+ D+++G YD A SLG + VVPA L AAR WL A QPWM RGYR P AS + +F NAGL+RDG+ PE++LIAE +YHGLQ+PIEPALR EVR FIEL VR T++ R
Sbjct: 9 VDAAGIAELRWDNPARKVNVFSAEAIEDFAALVARITSDDSIRGVMITSGKSVFHAGADLNMVSGFFDLSPAELWQIMSKIMASFYQLETCGKPVVAALNGHCLGGGFEMALAAHARFAVDDPKIRIGLPEAGLGLMPGFGGTQRMARIAPWQQAARDIIEGRCYDPQTAASLGLVDGVVPAEGLEAAARDWLFCAQDAAQPWMRRGYRPPGASAGYDDFFAVFNAGLSRDGIDAWPERRLIAETLYHGLQLPIEPALRHEVRCFIELAGMPEVRHTMRQR 289
BLAST of mRNA_C-australica_Contig_10034.1.1 vs. uniprot
Match:
A0A840STD9_9RHOB (3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Amaricoccus macauensis TaxID=57001 RepID=A0A840STD9_9RHOB)
HSP 1 Score: 263 bits (671), Expect = 2.500e-79
Identity = 140/283 (49.47%), Postives = 182/283 (64.31%), Query Frame = 1
Query: 1 VDGHGIAEMCWDDPYLKGNVFSTEAIAEWVALVEQVASDPSVRGVLITSGKASFHAGADLSMVSGFFGMSTEDLWSVMARVKDSLYRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWQRVTADMLQGATYDVSQARSLGQLTDVVPAGALRDAARRWLLDN----PAAEQPWMARGYRGPSASE-IERYFHALNAGLTRDGMADRPEQKLIAEAVYHGLQMPIEPALRLEVRRFIELTRNLSVRQTLQ 834
V+ G+A + W+ P NVFS A+A + A V ++ASDP + G ++ S +FHAGADL V F S + +W+ + V S RLETCGKPV AAINGH LGGGFEMALA H R DDPAI+LGLPE+ +GLMPGFGGTQRL RL ++ DM++G T+ A +LG + +VV ALR+ AR+ +L+ A QPW RG P+A +F NA TR +RP ++L+AEAVYHGLQMPI+PALRLE RRF+EL+R + R L+
Sbjct: 10 VESDGVATLLWE-PQGPMNVFSEAALASFDAAVGRIASDPVIVGAIVASSGRAFHAGADLDFVMELFDRSPQQVWAFLEAVMTSFRRLETCGKPVVAAINGHALGGGFEMALACHGRVVADDPAIRLGLPESAIGLMPGFGGTQRLPRLIEYRSAVRDMVKGRTWSPRDALALGAVDEVVAPDALRETARKRVLERLGNKTGATQPWDRRGTISPAADPGFAGFFTEFNAAQTRANWGNRPAERLVAEAVYHGLQMPIDPALRLEARRFVELSRIPATRAVLR 291
BLAST of mRNA_C-australica_Contig_10034.1.1 vs. uniprot
Match:
UPI001EE1178E (3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein n=1 Tax=unclassified Xanthobacter TaxID=2623496 RepID=UPI001EE1178E)
HSP 1 Score: 212 bits (539), Expect = 4.020e-60
Identity = 116/282 (41.13%), Postives = 167/282 (59.22%), Query Frame = 1
Query: 1 VDGHGIAEMCWDDPYLKGNVFSTEAIAEWVALVEQVASDPSVRGVLITSGKASFHAGADLSMVSGFFGMSTEDLWSVMARVKDSLYRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWQRVTADMLQGATYDVSQARSLGQLTDVVPAGALRDAARRWLLDNPAAEQPWMARGYRGPSAS----EIERYFHALNAGLTRDGMADRPEQKLIAEAVYHGLQMPIEPALRLEVRRFIELTRNLSVRQTLQ 834
+D GIA + WD P NV S +A +++A+ E +DP+V+GV+ITS K F AGADL+++ F G ++ M+ ++D L R+ET GKPV AA+NG LGGG E+ LA H R AVD P GLPEAGLGL+PG GG+QRL RL + ML G+ ++ ++LG + ++V A L AAR W+L +P A QPW G+ P E+ R+F AL++ + D + P + I VY GL++PI+ L +E R +EL R + T++
Sbjct: 6 LDADGIATVTWDLPGRPVNVLSMDARLKFIAVTEAALNDPAVKGVIITSAKKEFIAGADLTLLQSFRGKPAAEIMGKMSALRDFLRRMETAGKPVVAAMNGTALGGGLEICLACHHRIAVDRPDAVFGLPEAGLGLLPGAGGSQRLPRLIGIKAALPLMLDGSRVSAARGKALGFIDELVAAEELLPAARAWILAHPKAAQPWDQPGFVPPGGDIAGVEMNRWFMALDSKVHADTRGNFPAPRAILSCVYEGLRVPIDVGLAIEFRYLVELVRGDVAQNTIR 287
BLAST of mRNA_C-australica_Contig_10034.1.1 vs. uniprot
Match:
UPI000A9951DE (3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein n=1 Tax=Sphingomonas sp. CCH18-H6 TaxID=1768787 RepID=UPI000A9951DE)
HSP 1 Score: 211 bits (537), Expect = 7.460e-60
Identity = 119/269 (44.24%), Postives = 158/269 (58.74%), Query Frame = 1
Query: 13 GIAEMCWDDPYLKGNVFSTEAIAEWVALVEQVASDPSVRGVLITSGKASFHAGADLSMVSGFFGMSTEDLWSVMARVKDSLYRLETCGKPVAAAINGHCLGGGFEMALAAHARFAVDDPAIKLGLPEAGLGLMPGFGGTQRLTRLAPWQRVTADMLQGATYDVSQARSLGQLTDVVPAGALRDAARRWLLDNPAAEQPWMARGYRGPS----ASEIERYFHALNAGLTRDGMADRPEQKLIAEAVYHGLQMPIEPALRLEVRRFIELTR 807
GIA + WD + NVF+ ++ VE + ++ V+GV+ITS K +FHAGADLSM+S + +L + M + +L R+ET GKP AAAI GH LGGG E+ALA HARF D ++LGLPE +GLMPG GGTQRLTRL + M +G + +A LG +T + P L AA+ WLL N A QPW G+R PS +++ ++F A +A L + P I EA YHGLQ+P + ALRLE R F L R
Sbjct: 18 GIAVLTWDMRGREVNVFTERSLEALAVAVEALLAEREVKGVVITSAKKTFHAGADLSMISKMASLPPRELLARMLGLHAALRRIETGGKPFAAAIAGHALGGGLELALACHARFVARDAPVQLGLPEVKVGLMPGLGGTQRLTRLVRLEEALPAMAEGRQFPPGRALELGLVTGLAPRAELVGAAKAWLLSNLEARQPWDRPGFRPPSGPVQSAKGLQFFAAASANLRKHTGGHYPAPGRILEATYHGLQLPFDVALRLEARLFASLVR 286
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10034.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.67e-178 / Id = 88.57 Expect = 7.64e-178 / Id = 89.29 Expect = 1.50e-168 / Id = 83.57 Expect = 2.19e-147 / Id = 73.57 Expect = 1.64e-121 / Id = 63.70 Expect = 4.01e-119 / Id = 93.55 Expect = 2.06e-118 / Id = 62.28 Expect = 2.50e-79 / Id = 49.47 Expect = 4.02e-60 / Id = 41.13 Expect = 7.46e-60 / Id = 44.24 Sequence UPI001C08E756 A0A222E2Q4_9RHOB A0A231V1U6_9HYPH UPI0009801A64 A0A418ZYD0_9RHOB A0A348WDB0_9RHOB UPI00065C9CA9 A0A840STD9_9RHOB UPI001EE1178E UPI000A9951DE Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 1 Seed ortholog 414684.RC1_1743 PFAMs 3HCDH,3HCDH_N,ECH_1 Model size 840 Max annot lvl 204441|Rhodospirillales KEGG rclass RC00029,RC00099,RC00117,RC00241,RC00525,RC00831,RC00834,RC00896,RC01086,RC01095,RC01098,RC01103,RC01217,RC02115 KEGG ko ko:K01782 KEGG Reaction R01975,R03026,R03045,R03276,R04137,R04170,R04203,R04204,R04224,R04737,R04738,R04739,R04740,R04741,R04744,R04745,R04746,R04748,R04749,R05066,R05305,R06411,R06412,R06941,R06942,R07935,R07951,R08093,R08094 KEGG Pathway ko00071,ko00280,ko00281,ko00310,ko00362,ko00380,ko00410,ko00640,ko00650,ko00903,ko00930,ko01040,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00071,map00280,map00281,map00310,map00362,map00380,map00410,map00640,map00650,map00903,map00930,map01040,map01100,map01110,map01120,map01130,map01200,map01212 KEGG Module M00032,M00087 Hectar predicted targeting category other localisation Exons 1 Evalue 8.72e-52 EggNOG OGs COG1024@1|root,COG1250@1|root,COG1024@2|Bacteria,COG1250@2|Bacteria,1MU9P@1224|Proteobacteria,2TS8E@28211|Alphaproteobacteria,2JPNR@204441|Rhodospirillales EC 1.1.1.35,4.2.1.17,5.1.2.3 Description Belongs to the enoyl-CoA hydratase isomerase family Cds size 816 COG category I BRITE ko00000,ko00001,ko00002,ko01000
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586738.0558755-UTR-C-australica_Contig_10034:3..27 1682586738.0558755-UTR-C-australica_Contig_10034:3..27 Chrysoparadoxa australica CS_1217 UTR C-australica_Contig_10034 4..27 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586738.0661724-CDS-C-australica_Contig_10034:27..843 1682586738.0661724-CDS-C-australica_Contig_10034:27..843 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_10034 28..843 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10034.1.1
>prot_C-australica_Contig_10034.1.1 ID=prot_C-australica_Contig_10034.1.1|Name=mRNA_C-australica_Contig_10034.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=272bp
MCWDDPYLKGNVFSTEAIAEWVALVEQVASDPSVRGVLITSGKASFHAGA back to top mRNA from alignment at C-australica_Contig_10034:4..843+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10034.1.1 ID=mRNA_C-australica_Contig_10034.1.1|Name=mRNA_C-australica_Contig_10034.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=840bp|location=Sequence derived from alignment at C-australica_Contig_10034:4..843+ (Chrysoparadoxa australica CS_1217)GTCGACGGACATGGCATTGCAGAG ATGTGCTGGGACGATCCGTACCTCAA
GGGAAACGTATTTTCAACTGAAGCCATCGCGGAATGGGTGGCACTGGTGG
AGCAGGTGGCCTCAGACCCAAGTGTTCGCGGCGTGCTGATCACCTCCGGC
AAGGCCTCGTTTCACGCCGGCGCGGACCTGAGCATGGTCAGCGGCTTCTT
CGGCATGTCGACCGAGGATCTCTGGTCTGTCATGGCCCGCGTCAAGGACA
GCCTTTACCGGCTGGAGACCTGTGGCAAGCCAGTGGCCGCGGCGATCAAC
GGGCATTGCCTCGGCGGCGGTTTCGAGATGGCACTGGCGGCGCATGCCAG
GTTCGCCGTGGACGATCCAGCGATCAAACTCGGCCTGCCCGAGGCCGGGC
TCGGGCTGATGCCGGGCTTTGGTGGCACGCAACGTCTGACGCGGTTGGCG
CCGTGGCAGCGGGTGACGGCGGACATGTTGCAGGGGGCCACCTACGACGT
GTCGCAAGCGCGATCTTTGGGCCAGCTGACCGATGTGGTTCCTGCGGGTG
CCCTGCGCGATGCCGCCCGTCGGTGGCTGCTGGACAATCCCGCCGCCGAA
CAACCTTGGATGGCGCGGGGCTATCGTGGGCCATCCGCCTCGGAGATCGA
GCGGTACTTCCACGCGCTGAACGCCGGGTTGACCCGTGATGGTATGGCCG
ACCGACCCGAGCAGAAGTTGATCGCCGAGGCCGTCTATCACGGGCTGCAA
ATGCCCATCGAGCCGGCGCTGCGGCTGGAGGTGCGCCGGTTCATCGAACT
GACCCGCAATCTCTCGGTCAGGCAAACCCTGCAGGCTCGC back to top Coding sequence (CDS) from alignment at C-australica_Contig_10034:4..843+
>mRNA_C-australica_Contig_10034.1.1 ID=mRNA_C-australica_Contig_10034.1.1|Name=mRNA_C-australica_Contig_10034.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=816bp|location=Sequence derived from alignment at C-australica_Contig_10034:4..843+ (Chrysoparadoxa australica CS_1217) back to top