mRNA_C-australica_Contig_10.10.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Properties


Property Name	Value
Stop	0
Start	0
Model size	2082
Hectar predicted targeting category	mitochondrion
Exons	18
Cds size	2082

Relationships

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_C-australica_Contig_10.10.1	prot_C-australica_Contig_10.10.1	Chrysoparadoxa australica CS_1217	polypeptide	C-australica_Contig_10 26412..31574 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-australica_Contig_10:26412..31574-
coding sequence from alignment at C-australica_Contig_10:26412..31574-

protein sequence of mRNA_C-australica_Contig_10.10.1

>prot_C-australica_Contig_10.10.1 ID=prot_C-australica_Contig_10.10.1|Name=mRNA_C-australica_Contig_10.10.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=694bp
AAVELQRLYRGMMVRRVWLPKLAEANRRRACLTSFRERVLGKQVTSIKRR
WRRHLEWREKNLHGRRKLRGMLAEIGCGHLYRVCGMEPEDPVQRGILGRA
CQVAMLTEGTRPSALPTLRELTMLLQFVKEFGKSRRQLRKELVSKWRKTI
TGRAQARQLEAQSSGKEWLNGYRERQQLLQRLSEMIRNADDEETKKKLVR
MHTHHRLEQIEEQRRREEEMESYLMWRAEMCQHASEHQLKVKHAEAEDRE
RNLMRWEEVRQRRKQVIDSVVQLRKDELSKEEVALRAKFPDRFASPATEG
STPSSACEGYLMVKKGLEAHLKGGTVTVDVLLRRTEACNLAYDAISKLKE
AEEELLCCRKRWHHCRSKSQRDRARYLELRSAQKKLKCKTRTERKRFGTK
VTNSEARALSAQQDAKEALASAKLAVISRTKAVATVCGMEPPAALMKRWS
QAKTYHQALARSIDGWCRAEARRFRKRHHFDLVLRLQRAAELAGQPREHY
CSAALAHQTATGDLTSLAAVLHFEADLRVVQHGKKRQTVSIPLAPWMGVG
LASELQWGWKEGHEACDWKGLGAAAFNAVVKPRLALTGGTLTLGEDKGSG
SSLPDSLVPHATWEAEVDGQLCSVSTSFLLEGCLQVNPESGQGSIKMERK
EWESAVTSFVAHRPVCGNCRKSFGAWLCVSSRVLCETCKCLLIR

mRNA from alignment at C-australica_Contig_10:26412..31574-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-australica_Contig_10.10.1 ID=mRNA_C-australica_Contig_10.10.1|Name=mRNA_C-australica_Contig_10.10.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=5163bp|location=Sequence derived from alignment at C-australica_Contig_10:26412..31574- (Chrysoparadoxa australica CS_1217)
GCGGCTGTGGAGCTGCAGAGGCTGTACCGTGGGATGATGGTGAGGCGGGT
GTGGCTGCCTAAGCTGGCTGAGGCAAACAGGAGGCGAGCCTGCTTGACCA
GCTTTAGAGAGCGAGTGCTTGGGAAGCAGGTGACATCCATAAAGCGAAGA
TGGCGGAGGCATCTGGAATGGAGAGAGAAGAACCTGCATGGCAGGTAAGC
TTCCTTGGTCAGCTCAATGGACCGTTCGTGTATGGGTTTGGACCGTCATG
GCATGATGGTTGACAGCCATTCTTTGATTGGTCCTAGCAACTGCTTTGCT
CTGATGAGCTCCGCACCATCTAGCATTCACTGGCCCTGGCCTTAACCTTG
CCTCACTGTTTGCCGTAGGAGGAAGCTGCGAGGCATGCTGGCTGAGATAG
GGTGCGGTCACTTGTATAGGGTGTGTGGAATGGAGCCAGAGGATCCAGTT
CAGAGAGGTAGTATGCTTGCATTATTGATGATCTATTGATGTGCAGGAAC
CCTCAACAATTTAACTTCATCTTAACCGGAACGCTCACCTCTAATCTTGC
TTCTTCAGGTATCCTTGGAAGGGCTTGCCAAGTGGCAATGCTCACCGAAG
GTGGTAACCTTCTTTGCCTGAAGTTTTTAATCTCAATTCTTGGTGCCTCA
CAGACCTGAGTGGGAATGCTTATGCTTTCATGATGCCCAGAGTTTCGCGG
CACGCTTGCGTTTACTATCCCCTCTTCCCTTCTCCTCTCCTTTGTTTCTC
ACAGGCACTAGGCCCTCCGCGCTACCTACATTGCGGGAGCTCACAATGCT
GCTGCAGTTTGTGAAAGAGTTTGGGAAGTCACGCCGGCAACTGAGGAAGG
AGCTCGTGTCTAAGTGGAGGAAGACGATCACGGGCAGGTGTGATGCTTAT
CTCCTGCTCCCAAGCCAACTCTCGCATATCCCCAACACTGCCTGAGTTAC
TAAAGCAACACAGATCGCCCCTCGAGTGCCAGGTGCACCGCATAGCACTT
GGGTATTTTACTCATCAATGCAATATGGACCACTCACATCTCAGGCTGTG
CTGCATTTTCACTGCTTGTTCTGGCCTTTATCCTGCTGGCACCTAAACGC
CCACGCTAACGTCATTGCGTGCTCAACAGGGCTCAAGCCAGGCAGCTAGA
AGCGCAGAGCTCAGGGAAAGAGTGGCTAAATGGCTACAGAGAGCGGCAGC
AGTTGCTGCAGAGGCTGAGTGAGATGATACGGAATGCAGATGATGAAGAG
ACAAAGAAAAAACTGGTGAGGATGCACACGCATCATCGCTTGGAGCAGAT
TGAGGAGCAGAGGCGACGGGAGGAGGAAATGGAGTCCTACTTGATGTGGA
GGGCAGAGATGTGCCAGCATGCCTCAGAGCACCAGCTGAAGGTGAAGCAT
GCAGAAGCAGAGGACAGGCAAGGAGGCTACTTCTATACCACCCTAGCCCA
CATTAAGAACGTCCCAAACCTAGCGTAGCTTAAAGCTTCTCCAGTCCGGT
CTACTTTTCTCCTAATCAGCATAGTATAACCAACTCTAGGTCCAACTCAC
CTATCTCACCATTACCCCTTTGCCTCCTTCAATTCAATGCGACCTCTCGA
GTTCTGTGAGGGTTTTAGTTCAGTCAAACCAATCTATGGTAGCCTGCCGT
GTCAGTTTGGCGCTGCTGTCTTAATTAATTCAGATCCATTTGGTAATGCT
ACCTGCGCATAATTCACGCCTCCCTTTGGTAATGCTACTGCTCAGGGAGC
GGAACCTGATGAGGTGGGAGGAGGTGCGGCAGAGGAGGAAGCAAGTCATA
GACAGTGTGAGTGACCCTTTCGTGATGAGTGGGCGCTGGATTAAGGATCA
GATGCAGTCCATGCCTGTCTTAACTTCCCCGTCTTTATCTTCCTGCTGTT
GGAATGCCACTGAGTTTTATCCACCTCGCCGGCCTGGCAGGTGGTGCAGC
TTCGGAAGGATGAGCTCTCCAAGGAAGAGGTGGCCCTAAGAGCAAAGTTC
CCTGACCGCTTTGCAAGTCCAGGTACTCAGAGCCCAGAGCACTCACTAAG
ATTTTTGCATGCTTCTTGCCTTATTCTCACTTTGGCTGCTTTCCTTTATC
CACCAAGCCTCTCCCCCATTCAATCCTGCACCCATGCTCAGGTCAGCTAC
ATCCCAGGATTGCTCATACGCTCCTGACAATCTGTGAACACTCTGCGCAG
TAACTGCAAAAGATTAACTCACTCTTGGCTTCCACCTTACGCCCAGTCTT
CTGCCATTCTTTGCCTATCACTTCTCTTAACACTTCAGCTACAGAAGGCA
GCACCCCGAGTAGTGCATGTGAAGGTGATCACTTGCCTCTCACTTGGTCT
TCACTTGCTCCTCACTTATCCTGACCTAAGCCATCACTTTAGGCTACTTG
ATGGTAAAGAAGGGTTTGGAAGCACATTTAAAGGGAGGAACGGTGACGGT
AGATGTGCTCCTGAGGCGAACTGAAGCTTGTAACCTTGCGTACGATGCCA
TTTCAAAGTTGAAGGAAGCTGAGGTGCTCATTAGCGCTACCTGGACTAAC
TACCCGAAGCTCCTTCCTTGCCCTTGCCTTTGCCCTTATCTAAGCTGAGC
CTCTAACCTTACCATGCCAATGCATGCTGCACCTCAACTCATAAACCTCA
GGAAGAGCTGCTGTGCTGCAGGAAGAGGTGGCACCACTGCAGGTCCAAGT
CACAACGAGACAGAGCGAGGTCGTTCCCAAACTAAAAAAGATGTGATTTG
ATCTTTGATCCCCACGAGACCTAGGTTGGCTAACCTGACAAGACATCACC
ACCATGTAAGATATCTTGAGCTACGGAGTGCACAGAAAAAGCTCAAGTGC
AAAACGCGAACTGAGAGGAAGCGATTTGGAACCAAGGTGGGGAGCTCAGA
CATGCTGCTTGGAGAGGATCAGTTTTCTTTCCTTGGAAAAGGCTTTTAAT
TCCTTCAATTTCTTCTTTACCTATTTATACCTATTTGCATACGTGTCGCC
CTATCTGTCTTTGGATTTTTCGCTTTCTCACCGGAGCTTTCTACTTGTTC
TGAAATGGCCCGCCCTCTTGCCCTTGCATTGCCAGGTCACAAATAGTGAA
GCCAGAGCCCTGTCTGCGCAGCAAGATGCCAAGGAAGCCCTCGCCTCAGC
AAAGGTTGACCTCACTCATAGCCAAGCCACCATAGCCATCTTGGTGTGTC
GCCACTGCTCTGCCTGACAATGCCTGGCAAATGTGCGCTTCTGTTCCTTC
GACCAGCTGGCTGTGATTAGTCGTACAAAGGCTGTGGCTACAGTGTGTGG
CATGGAGCCCCCAGCAGCCTTGATGAAGCGGTAAGGGTGTGTTGAGAGCT
CTCAGAGACGTTCTCGGTGCATTATTAGACAAATAGCACTCAGCTTTACA
ACGGAATTACTCAAATCCTCCGCGATACTTCAATCAGCTGCTGTGATTTA
AGCTCCTGCGAACGCTATCACTACACTCTGCTAATTCGAGAGTCCTCATG
GCTTGAACTTACACAAGCTGACTCTAAGTGTACACCACCTTCAGGTGGTC
CCAAGCTAAGACTTACCATCAAGCACTGGCTCGAAGCATTGACGGCTGGT
GCCGGGCAGAGGCTCGCAGGTGTGGTGACCACAACTGACCAAACCTGACT
TATTATACCTGGTCCAGTAAAGCTACTTACTTACTGCAAAGGCTAGCAAG
TATACATTAGCTGTTGCCACTGCAAAGTGCCACCCCACACTGAGTGCTGA
GCCCATGCTGTCCAGTTGCATCCACCATAGGTCCTTGACCTCCTCATGAA
CCACCTCCTCTGAACACACAGGTTCAGGAAGAGGCACCATTTTGACTTGG
TGTTGCGGCTGCAGCGAGCAGCAGAGCTGGCTGGGCAGCCTAGAGAGCAC
TACTGCAGTGCTGCTTTGGCACATCAAACTGCGACTGGTGACTTAACGTC
ACTTGCTGCAGTGAGTGCTCATGTGCATGTGCTGATACCAGCTCATAACC
AACCATTGCCCTTTGCAGAACTTATCAAATGGCCTTGCGTTGCCCGACTT
AAAGTCATGCTGCGCTATATTGCACCGCGTGCCAGCCAAGGAATGACTTT
ACAAACACGTGATGATGCCCAGGTGTTGCACTTTGAAGCAGATTTGCGCG
TTGTACAGCACGGAAAGAAGAGGCAAACTGTGAGCATCCCTCTGGCACCT
TGGATGGGTGTAGGGCTGGCAAGTGAGCTTCAGTGGGGATGGAAGGAGGG
GCATGAAGCATGTGATTGGAAGGGACTGGGAGCTGCCGCATTCAATGCAG
TGGTCAAGCCGCGTCTTGCGTTAACAGGGGGGACTCTTACTCTTGGGGAA
GATAAAGGCAGCGGAAGCTCTCTTCCTGACAGCTTGGTACCGCACGCGAC
ATGGGAAGCTGAGGTGACGTTAGCAGACAAGATCAGACTAGACCAGCCTG
TAGTACGTATCCTGTAGCATGCAGATACTTTGTGTTAGCGGTGGTCTGTG
TTGCCAGTGAGAGCATTTATGTACAAGTGTACAACTCTACCTTTAGGAGA
TGTGCAAGTTCATGATTATAATGGGCAGGTAGATGATGAATTGAGGATGT
GCTGAGTCTAGCTGCTCTACTGGTCGCAGCAACATTCTCCCAAAGCAATC
AATCACACCACTCCATCATTGCTCTCAGGTTGATGGACAGCTGTGCTCAG
TGAGTACCAGCTTTTTATTGGAGGGCTGCCTACAAGTCAACCCAGAATCT
GGCCAGGGCTCCATAAAGATGGAAAGGAAAGAATGGGAATCAGCAGTTAC
AAGCTTTGTGGCCCACCGACCTGTGTGCGGCAACTGCCGAAAGAGCTTTG
GTGCCTGGCTTTGTGTCAGTTCAAGGGTATTGTGTGAGGTGAGTTGGTGC
CGATGCCTGAAGTACTAATGATGGGAAAACCAGTTGGCCAGACTATCCCA
CATGTTGCCTTGAGCTTTAATGCGGATCTAACTGATAGACTCATTCACGT
TTAATCCTGCTGCGCCGCACATTGCTGACATTTGAACCCATGATTGAATG
ATTGATGGTGATGGAACCCCAATACTTTATCAACTGGCCGCTTCTCACAT
GGCCACAGCTCACTCACTTCCCTATTTTACCGTTCACAGACGTGCAAATG
CCTGCTAATCCGC

Coding sequence (CDS) from alignment at C-australica_Contig_10:26412..31574-

>mRNA_C-australica_Contig_10.10.1 ID=mRNA_C-australica_Contig_10.10.1|Name=mRNA_C-australica_Contig_10.10.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=2082bp|location=Sequence derived from alignment at C-australica_Contig_10:26412..31574- (Chrysoparadoxa australica CS_1217)
GCGGCTGTGGAGCTGCAGAGGCTGTACCGTGGGATGATGGTGAGGCGGGT
GTGGCTGCCTAAGCTGGCTGAGGCAAACAGGAGGCGAGCCTGCTTGACCA
GCTTTAGAGAGCGAGTGCTTGGGAAGCAGGTGACATCCATAAAGCGAAGA
TGGCGGAGGCATCTGGAATGGAGAGAGAAGAACCTGCATGGCAGGAGGAA
GCTGCGAGGCATGCTGGCTGAGATAGGGTGCGGTCACTTGTATAGGGTGT
GTGGAATGGAGCCAGAGGATCCAGTTCAGAGAGGTATCCTTGGAAGGGCT
TGCCAAGTGGCAATGCTCACCGAAGGCACTAGGCCCTCCGCGCTACCTAC
ATTGCGGGAGCTCACAATGCTGCTGCAGTTTGTGAAAGAGTTTGGGAAGT
CACGCCGGCAACTGAGGAAGGAGCTCGTGTCTAAGTGGAGGAAGACGATC
ACGGGCAGGGCTCAAGCCAGGCAGCTAGAAGCGCAGAGCTCAGGGAAAGA
GTGGCTAAATGGCTACAGAGAGCGGCAGCAGTTGCTGCAGAGGCTGAGTG
AGATGATACGGAATGCAGATGATGAAGAGACAAAGAAAAAACTGGTGAGG
ATGCACACGCATCATCGCTTGGAGCAGATTGAGGAGCAGAGGCGACGGGA
GGAGGAAATGGAGTCCTACTTGATGTGGAGGGCAGAGATGTGCCAGCATG
CCTCAGAGCACCAGCTGAAGGTGAAGCATGCAGAAGCAGAGGACAGGGAG
CGGAACCTGATGAGGTGGGAGGAGGTGCGGCAGAGGAGGAAGCAAGTCAT
AGACAGTGTGGTGCAGCTTCGGAAGGATGAGCTCTCCAAGGAAGAGGTGG
CCCTAAGAGCAAAGTTCCCTGACCGCTTTGCAAGTCCAGCTACAGAAGGC
AGCACCCCGAGTAGTGCATGTGAAGGCTACTTGATGGTAAAGAAGGGTTT
GGAAGCACATTTAAAGGGAGGAACGGTGACGGTAGATGTGCTCCTGAGGC
GAACTGAAGCTTGTAACCTTGCGTACGATGCCATTTCAAAGTTGAAGGAA
GCTGAGGAAGAGCTGCTGTGCTGCAGGAAGAGGTGGCACCACTGCAGGTC
CAAGTCACAACGAGACAGAGCGAGATATCTTGAGCTACGGAGTGCACAGA
AAAAGCTCAAGTGCAAAACGCGAACTGAGAGGAAGCGATTTGGAACCAAG
GTCACAAATAGTGAAGCCAGAGCCCTGTCTGCGCAGCAAGATGCCAAGGA
AGCCCTCGCCTCAGCAAAGCTGGCTGTGATTAGTCGTACAAAGGCTGTGG
CTACAGTGTGTGGCATGGAGCCCCCAGCAGCCTTGATGAAGCGGTGGTCC
CAAGCTAAGACTTACCATCAAGCACTGGCTCGAAGCATTGACGGCTGGTG
CCGGGCAGAGGCTCGCAGGTTCAGGAAGAGGCACCATTTTGACTTGGTGT
TGCGGCTGCAGCGAGCAGCAGAGCTGGCTGGGCAGCCTAGAGAGCACTAC
TGCAGTGCTGCTTTGGCACATCAAACTGCGACTGGTGACTTAACGTCACT
TGCTGCAGTGTTGCACTTTGAAGCAGATTTGCGCGTTGTACAGCACGGAA
AGAAGAGGCAAACTGTGAGCATCCCTCTGGCACCTTGGATGGGTGTAGGG
CTGGCAAGTGAGCTTCAGTGGGGATGGAAGGAGGGGCATGAAGCATGTGA
TTGGAAGGGACTGGGAGCTGCCGCATTCAATGCAGTGGTCAAGCCGCGTC
TTGCGTTAACAGGGGGGACTCTTACTCTTGGGGAAGATAAAGGCAGCGGA
AGCTCTCTTCCTGACAGCTTGGTACCGCACGCGACATGGGAAGCTGAGGT
TGATGGACAGCTGTGCTCAGTGAGTACCAGCTTTTTATTGGAGGGCTGCC
TACAAGTCAACCCAGAATCTGGCCAGGGCTCCATAAAGATGGAAAGGAAA
GAATGGGAATCAGCAGTTACAAGCTTTGTGGCCCACCGACCTGTGTGCGG
CAACTGCCGAAAGAGCTTTGGTGCCTGGCTTTGTGTCAGTTCAAGGGTAT
TGTGTGAGACGTGCAAATGCCTGCTAATCCGC

mRNA_C-australica_Contig_10.10.1 (mRNA) Chrysoparadoxa australica CS_1217

ZOOM

x 1

POSITION

0