prot_C-tenellus_contig10047.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10047.1.1
Unique Nameprot_C-tenellus_contig10047.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length49
Homology
BLAST of mRNA_C-tenellus_contig10047.1.1 vs. uniprot
Match: D7FV47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV47_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 9.570e-18
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0
Query:    1 YKRTSFIILSIGSVVALSAVMMGSHSLYNFLVPSEDAEEDGGFCSAGE 48
            YKRTSFI+LSIG+VVALSAVMMG HSLYNF+ P+ D E  GGFCS GE
Sbjct:   58 YKRTSFIVLSIGAVVALSAVMMGGHSLYNFMFPNPDEEGGGGFCSVGE 105          
BLAST of mRNA_C-tenellus_contig10047.1.1 vs. uniprot
Match: A0A6H5JFJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFJ9_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.200e-15
Identity = 37/48 (77.08%), Postives = 41/48 (85.42%), Query Frame = 0
Query:    1 YKRTSFIILSIGSVVALSAVMMGSHSLYNFLVPSEDAEEDGGFCSAGE 48
            YKRTSFI+LSIG+VVALSAVMMG HSLYNF+ P+ D E  GGFCS GE
Sbjct:  486 YKRTSFIVLSIGAVVALSAVMMGGHSLYNFMFPNPDEEGAGGFCSVGE 533          
BLAST of mRNA_C-tenellus_contig10047.1.1 vs. uniprot
Match: D8LFQ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ1_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 4.420e-9
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0
Query:    1 YKRTSFIILSIGSVVALSAVMMGSHSLYNFLVPSEDAEEDGGFCSAG 47
            +KR SFIILSI SVVALSA +MG + LY+ + P+   EE+ G CS G
Sbjct:   30 FKRPSFIILSIASVVALSAFLMGINGLYDIIHPTAGGEEENGICSVG 76          
BLAST of mRNA_C-tenellus_contig10047.1.1 vs. uniprot
Match: A0A836CFF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFF2_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 5.280e-9
Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 YKRTSFIILSIGSVVALSAVMMGSHSLYNFLVPSEDAEEDGGFCSAGE 48
            Y+R+S II+SIG+VVALSA++MG  SLY    P +D +E GGFC+AGE
Sbjct:  177 YQRSSLIIVSIGAVVALSALLMGGQSLYFLAFPRQD-DESGGFCAAGE 223          
BLAST of mRNA_C-tenellus_contig10047.1.1 vs. uniprot
Match: A0A835ZGS5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGS5_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 9.950e-9
Identity = 29/48 (60.42%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    1 YKRTSFIILSIGSVVALSAVMMGSHSLYNFLVPSEDAEEDGGFCSAGE 48
            Y+R+S II+SIG+VVALSA++MG  SLY    P +D +E GGFC+AGE
Sbjct:  477 YQRSSLIIVSIGAVVALSALLMGGQSLYFLAFPRQD-DESGGFCAAGE 523          
BLAST of mRNA_C-tenellus_contig10047.1.1 vs. uniprot
Match: A0A6H5JD73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD73_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 4.760e-8
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0
Query:    1 YKRTSFIILSIGSVVALSAVMMGSHSLYNFLVPSEDAEEDGGFCSAG 47
            +KR SFIILSI SVVALSA +MG + LY+ L P+   +E+ G CSAG
Sbjct:  458 FKRPSFIILSIASVVALSAFLMGINGLYDILHPTAGGDEEDGICSAG 504          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10047.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FV47_ECTSI9.570e-1877.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JFJ9_9PHAE1.200e-1577.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFQ1_ECTSI4.420e-957.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CFF2_9STRA5.280e-960.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZGS5_9STRA9.950e-960.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JD73_9PHAE4.760e-859.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10047contigC-tenellus_contig10047:355..501 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10047.1.1mRNA_C-tenellus_contig10047.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10047 355..501 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10047.1.1 ID=prot_C-tenellus_contig10047.1.1|Name=mRNA_C-tenellus_contig10047.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=49bp
YKRTSFIILSIGSVVALSAVMMGSHSLYNFLVPSEDAEEDGGFCSAGE*
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