mRNA_C-tenellus_contig10414.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10414.1.1 vs. uniprot
Match: A0A6H5JWC3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWC3_9PHAE) HSP 1 Score: 198 bits (504), Expect = 2.550e-57 Identity = 111/230 (48.26%), Postives = 154/230 (66.96%), Query Frame = 1 Query: 10 LWGAKRADMKALAKIPSSDCKIYQLCKTKAGFVPYYLRLVMVRMLHSNAKHALAYAFLLRLCEGSEEVPTRVKAMMCYISATNAGNNILRAHFAFMAYRAGVSISRLVEITRGAGDASVGSTSGEPDDKEEMAMAMAQAASYDANSLLSPELVSVISWLYSPAAVIELVTTISLQSAFHRWTSVYVPMSYEPEVENFLGMDGNGVMLDLPLEGPAFKCQEDWDELARETR 699 ++G K AD ++L KIP+SD ++ CK GFVPYY+R +M H+NAK AL++ FLLRLC+GS+EVP ++K +M Y ATNA NN+LRAHFAFMA R+GV++SRL+++T + ST G E+ AMA AQAAS+ + + L +IS L+SP AVIEL+ T+S++ A HRWTSVYVP YEPE++ F+ G L +P P Q+ W+E+A + R Sbjct: 280 IFGGKMADNRSLKKIPTSDSALFSQCKKDGGFVPYYIR----QMQHANAKKALSFGFLLRLCQGSDEVPVQLKQLMAYQCATNAENNVLRAHFAFMAMRSGVTLSRLIQVT------DITSTGGGDSAAEDAAMAFAQAASWTPTRMTAA-LAGLISRLFSPPAVIELLITVSVEFAIHRWTSVYVPRRYEPEIDEFV--KEYGPALGIP-HSPCTADQQKWEEIAAQKR 495
BLAST of mRNA_C-tenellus_contig10414.1.1 vs. uniprot
Match: D7FMN7_ECTSI (Probable fusion protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMN7_ECTSI) HSP 1 Score: 183 bits (464), Expect = 4.200e-52 Identity = 107/228 (46.93%), Postives = 144/228 (63.16%), Query Frame = 1 Query: 16 GAKRADMKALAKIPSSDCKIYQLCKTKAGFVPYYLRLVMVRMLHSNAKHALAYAFLLRLCEGSEEVPTRVKAMMCYISATNAGNNILRAHFAFMAYRAGVSISRLVEITRGAGDASVGSTSGEPDDKEEMAMAMAQAASYDANSLLSPELVSVISWLYSPAAVIELVTTISLQSAFHRWTSVYVPMSYEPEVENFLGMDGNGVMLDLPLEGPAFKCQEDWDELARETR 699 GAK AD +L P+++ + Q C AGFVPYYL V+M HS A++A +AF LRLC+GSEEVP ++K +MCYI ATNAGN ILRAH+AFMA+R G+ I +L T +V + D K+ AMA+A+A S S +SP LV ++ YSPA VIEL+ T+SL +HRWT++Y+P YEPEV F+ +G L + E P K Q W+ +A+E R Sbjct: 198 GAKLADRASLKNTPTAEQLVAQKCMELAGFVPYYL----VQMKHSQARNAFVWAFTLRLCQGSEEVPAQLKQLMCYICATNAGNTILRAHYAFMAHRNGMPIRQLATATNTDSSEAVAADD-TIDAKQVAAMALAEACS-GTPSTVSPVLVGLLMRQYSPAGVIELIATVSLAFMYHRWTAIYMPREYEPEVLKFV--QEHGAALGIDPERPCTKDQSTWEGIAKEAR 417
BLAST of mRNA_C-tenellus_contig10414.1.1 vs. uniprot
Match: A0A6H5JXG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXG8_9PHAE) HSP 1 Score: 145 bits (366), Expect = 6.990e-38 Identity = 90/187 (48.13%), Postives = 117/187 (62.57%), Query Frame = 1 Query: 10 LWGAKRADMKALAKIPSSDCKIYQLCKTKAGFVPYYLRLVMVRMLHSNAKHALAYAFLLRLCEGSEEVPTRVKAMMCYISATNAGNNILRAHFAFMAYRAGVSISRLVEITRGAGDASVGSTSGEPDDKEEMAMAMAQAASYDANSLLSPELVSVISWLYSPAAVIELVTTISLQSAFHRWTSVYVP 570 L GAK AD +L P+S+ + QLC +AGF PYYL + + +NA++AL +AF RLC+GSEEVP K M Y+ AT+A N ILRAHFAFMA+R GVS+S L T GD T G D K+ A++MA+A L ELV+++ Y+PA VIELV T+SL S RWTS+Y+P Sbjct: 218 LVGAKMADSASLKGTPTSEKNVKQLCTERAGFAPYYL-VGEEKSKMANARNALVWAFTRRLCQGSEEVPAATKQTMGYMLATSADNTILRAHFAFMAHRNGVSVSNLASATAEGGD-----TDGGEDLKKAAALSMARACGGTPGPL-PRELVALLMRQYTPAGVIELVNTLSLVSMLQRWTSIYMP 397
BLAST of mRNA_C-tenellus_contig10414.1.1 vs. uniprot
Match: D7G5G2_ECTSI (Probable fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5G2_ECTSI) HSP 1 Score: 102 bits (254), Expect = 7.960e-23 Identity = 72/152 (47.37%), Postives = 89/152 (58.55%), Query Frame = 1 Query: 253 TNAGNNILRAHFAFMAYRAGVSISRLVEITRGAGDASVGSTSGEPDDKEEMAMAMAQAASYDANSLLSP---ELVSVISWLYSPAAVIELVTTISLQSAFHRWTSVYVPMSYEPEVENFLGMDGNGVMLDLPLEGPAFKCQEDWDELARETR 699 T+A N ILRAHFAFMA+R GVS+S L T GD T G D K+ A++MA+A S L P ELV+++ Y+PA VIELV T+SL S RWTS+Y+P YEPEV F+ + NG L L P + Q W ELA E R Sbjct: 104 TSADNTILRAHFAFMAHRNGVSVSDLANATAEGGD-----TDGGEDLKKAAALSMARACS----GTLGPMPRELVALLMRQYTPAGVIELVNTLSLVSMLQRWTSIYMPKQYEPEVLVFV--EENGSALSLDPTKPCTEEQSGWRELAAEIR 244
BLAST of mRNA_C-tenellus_contig10414.1.1 vs. uniprot
Match: A0A850G4F7_9DELT (Uncharacterized protein n=1 Tax=Pseudenhygromyxa sp. WMMC2535 TaxID=2712867 RepID=A0A850G4F7_9DELT) HSP 1 Score: 94.7 bits (234), Expect = 7.840e-19 Identity = 76/223 (34.08%), Postives = 113/223 (50.67%), Query Frame = 1 Query: 31 DMKALAKIPSSDCKIYQLCKTKAGFVPYYLRLVMVRMLHSNAKHALAYAFLLRLCEGSEEVPTRVKAMMCYISATNAGNNILRAHFAFMAYRAGVSISRLVEITRGAGDASVGSTSGEPDDKEEMAMAMAQAASYDANSLLSPELVSVISWLYSPAAVIELVTTISLQSAFHRWTSVYVPMSYEPEVENFLGMDGNGVMLDLPLEGPAFKCQEDWDELARETR 699 D AL I K+++ + GFVPYY+ R+ + AK A+ + R+ + E+P +K C+ +A N+ N++L AHFA A RAG SI +L RGA T G +E A A+A+ AS + L EL+ ++ +SP +IELVT +S+Q F R+ S Y SYE V +F+ +G +L LP + WDEL + R Sbjct: 254 DRGALETIAKRPAKVHEQVREAMGFVPYYVE----RVERTPAKRVFAHMLVERVQSSAGELPVWLKHAACFAAARNSKNDLLAAHFAHWAMRAGASIEQL----RGA--LMPRPTGG----REATAFALAKVASSQP-ATLGHELLERVTSQFSPPEIIELVTMLSIQGMFQRYVSTYPVDSYESPVADFV--TEHGTLLGLPRRPSQVSAR--WDELCQRAR 457 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10414.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10414.1.1 >prot_C-tenellus_contig10414.1.1 ID=prot_C-tenellus_contig10414.1.1|Name=mRNA_C-tenellus_contig10414.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=235bp MFFLWGAKRADMKALAKIPSSDCKIYQLCKTKAGFVPYYLRLVMVRMLHSback to top mRNA from alignment at C-tenellus_contig10414:148..1567- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10414.1.1 ID=mRNA_C-tenellus_contig10414.1.1|Name=mRNA_C-tenellus_contig10414.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=1420bp|location=Sequence derived from alignment at C-tenellus_contig10414:148..1567- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10414:148..1567- >mRNA_C-tenellus_contig10414.1.1 ID=mRNA_C-tenellus_contig10414.1.1|Name=mRNA_C-tenellus_contig10414.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=705bp|location=Sequence derived from alignment at C-tenellus_contig10414:148..1567- (Choristocarpus tenellus KU2346)back to top |