prot_C-tenellus_contig10340.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10340.2.1
Unique Nameprot_C-tenellus_contig10340.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length236
Homology
BLAST of mRNA_C-tenellus_contig10340.2.1 vs. uniprot
Match: A0A6H5KMS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMS2_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 7.860e-59
Identity = 92/148 (62.16%), Postives = 115/148 (77.70%), Query Frame = 0
Query:   79 IGTLYSSRGEVIRELNSNEYLEVMRDWAPVASFAASQADDEKIKASATSILESLRGMAQWQPKKKGDYRKPGSKFAFGVPFVAVKNDIIDALACLQVSEEEGVVIEWICQNPFTLGVEGNAVEWLTKGIVTLCSKRLEMPVTVAPAAR 226
            IGTL+ S  E+IREL+S EY  ++RDWAP+ASFA+ +A D K+K  A  IL  LRGMA+WQPK+  DY K GSK++FG P  A+K   +DALACLQVSE++GVV+EWIC NP TLG+ GNAVEWL KGI  LC KRL++PVT++P AR
Sbjct:  150 IGTLFESEDELIRELSSEEYTNLLRDWAPIASFASVEAIDTKVKEEAACILTVLRGMAEWQPKRNADYTKLGSKWSFGAPIGAIKGGQVDALACLQVSEDDGVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKAR 297          
BLAST of mRNA_C-tenellus_contig10340.2.1 vs. uniprot
Match: D7FI60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI60_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 5.900e-37
Identity = 59/92 (64.13%), Postives = 74/92 (80.43%), Query Frame = 0
Query:  135 MAQWQPKKKGDYRKPGSKFAFGVPFVAVKNDIIDALACLQVSEEEGVVIEWICQNPFTLGVEGNAVEWLTKGIVTLCSKRLEMPVTVAPAAR 226
            MA+WQPK+  DY K GSK++FG P  A+K   +DALACL+VSE++GVV+EWIC NP TLG+ GNAVEWL KGI  LC KRL++PVT++P AR
Sbjct:    1 MAEWQPKRNSDYTKVGSKWSFGAPIGAIKGGQVDALACLEVSEDDGVVVEWICGNPVTLGIPGNAVEWLAKGIHALCGKRLDLPVTISPKAR 92          
BLAST of mRNA_C-tenellus_contig10340.2.1 vs. uniprot
Match: A0A0G4F895_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F895_VITBC)

HSP 1 Score: 126 bits (317), Expect = 3.580e-32
Identity = 61/150 (40.67%), Postives = 97/150 (64.67%), Query Frame = 0
Query:   79 IGTLYSSRGEVIRELNSNEYLEVMRDWAPVASFAASQAD-DEKIKASATSILESLRGMAQWQPKKKGDYRKPGSKFAFGVPFVAVKNDIIDALACLQVSEEEGVVIEWICQNPFTLGVEGNAVEWLTKGIVTLCSKRLEMPVTVAPAARL 227
            +GTL+ S  E IREL S+E+L+ MR WAP+++F  ++ +   + + +AT ++  L+ MA+W+P + G Y      + FG P  A K   +DA+ACL++SE +GVV+ +I  NP  +GVEGNA +WL KG+  +C +RL M + + P  R+
Sbjct:   69 LGTLFKSEDEEIRELGSDEFLDTMRLWAPMSNFVVNEGNASSREEGNATRLV--LQQMAEWKPPRSGSYLGKTPDWRFGAPVGAFKGGQLDAVACLEISESDGVVVRYIVLNPLNIGVEGNAADWLIKGMAFICRERLGMRLDIYPLMRV 216          
BLAST of mRNA_C-tenellus_contig10340.2.1 vs. uniprot
Match: A0A835Z8Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z3_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.370e-26
Identity = 48/92 (52.17%), Postives = 64/92 (69.57%), Query Frame = 0
Query:  135 MAQWQPKKKGDYRKPGSKFAFGVPFVAVKNDIIDALACLQVSEEEGVVIEWICQNPFTLGVEGNAVEWLTKGIVTLCSKRLEMPVTVAPAAR 226
            M +W P +KGD+R+ GS +AF  P  A K   +DA+ACL+V+EE+G+ I W+C+NP  LGV GN++ WL KGI TL  KRL+M V   P AR
Sbjct:    1 MQKWAPARKGDFRQEGSGWAFAAPVAAFKAGNLDAVACLEVTEEDGITIAWLCENPSYLGVPGNSIAWLVKGIETLVGKRLDMAVQELPTAR 92          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10340.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KMS2_9PHAE7.860e-5962.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI60_ECTSI5.900e-3764.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A0G4F895_VITBC3.580e-3240.67Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A835Z8Z3_9STRA1.370e-2652.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..52
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10340contigC-tenellus_contig10340:2167..3183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10340.2.1mRNA_C-tenellus_contig10340.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10340 1949..3633 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10340.2.1 ID=prot_C-tenellus_contig10340.2.1|Name=mRNA_C-tenellus_contig10340.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=236bp
MRPAIWIWVAWLSLYKTCTAFNTLLPRPRTPLRCRMTATSPKSTSGSGFG
QKKDDSSDVPKDETPSTQSEEREIMTGIIGTLYSSRGEVIRELNSNEYLE
VMRDWAPVASFAASQADDEKIKASATSILESLRGMAQWQPKKKGDYRKPG
SKFAFGVPFVAVKNDIIDALACLQVSEEEGVVIEWICQNPFTLGVEGNAV
EWLTKGIVTLCSKRLEMPVTVAPAARLDSIPKSSD*
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