prot_C-tenellus_contig10220.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10220.1.1
Unique Nameprot_C-tenellus_contig10220.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length179
Homology
BLAST of mRNA_C-tenellus_contig10220.1.1 vs. uniprot
Match: A0A6H5K010_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K010_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 1.470e-57
Identity = 94/187 (50.27%), Postives = 126/187 (67.38%), Query Frame = 0
Query:    1 FVSKQIHYLGHDVSPQGIAVSQARVEAILEMHPPQTVKGLQSFLGSMNFVRKYIPHLATATEPLFELIR-----HTQKAKWNRPQQTAFGEYQRLLSTAPVLYFPDFSKEFFVHVDASNVGTGAYFEP-------IIAYHSALLSPSQRKYSATQKECLAVILAIQHWRPYVWGKYFTVITDHSALR 175
            F  K++ YLGH  S  GI +   R++AIL++  P+T+K ++S LG++N+V+++IP LAT T PL  L +     H  K +W      AF E ++LL+ APVL+FPDF+KEF VHVDAS  G GA+          IIAY S   + SQ+ YSAT KEC AV+LAIQHWRPY+WGK+FT +TDH+ALR
Sbjct:   34 FGPKEVKYLGHVQSSDGIRLGDDRIKAILDLPTPKTIKEIRSVLGTVNYVKRFIPDLATITAPLVNLTKKDAAKHVAK-RWGPEHDKAFAEVKQLLTKAPVLHFPDFTKEFVVHVDASEAGAGAFLAQQNGDDLNIIAYFSQRFNKSQQHYSATMKECYAVVLAIQHWRPYLWGKHFTCVTDHAALR 219          
BLAST of mRNA_C-tenellus_contig10220.1.1 vs. uniprot
Match: A0A6H5L2D4_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2D4_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 5.140e-55
Identity = 89/186 (47.85%), Postives = 123/186 (66.13%), Query Frame = 0
Query:    1 FVSKQIHYLGHDVSPQGIAVSQARVEAILEMHPPQTVKGLQSFLGSMNFVRKYIPHLATATEPLFELIRH----TQKAKWNRPQQTAFGEYQRLLSTAPVLYFPDFSKEFFVHVDASNVGTGAYFEP-------IIAYHSALLSPSQRKYSATQKECLAVILAIQHWRPYVWGKYFTVITDHSALR 175
            F  K++ YLGH  S  GI   + R+++ILE+  P  +K L+S LG++N+VRK+IP LA  T P+ EL +     +   +W      AF E +RLL+ APVL+F DFSKEF +HVDAS VG GA+          I++Y S   + SQ+ YSAT KEC A++L+IQHWRP++WGK+FT +TDH+ALR
Sbjct:   93 FGPKEVKYLGHIFSADGIRFGEDRIKSILELPTPTNIKSLRSVLGTINYVRKFIPDLAAVTAPMVELTKKDAVKSVAKRWGPKHDEAFAEVKRLLTNAPVLHFTDFSKEFVIHVDASEVGAGAFLAQKNGDDVNIVSYFSQRFNKSQQHYSATMKECYAIVLSIQHWRPHLWGKHFTCVTDHAALR 278          
BLAST of mRNA_C-tenellus_contig10220.1.1 vs. uniprot
Match: A0A6H5KUM8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUM8_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 9.210e-55
Identity = 95/187 (50.80%), Postives = 128/187 (68.45%), Query Frame = 0
Query:    1 FVSKQIHYLGHDVSPQGIAVSQARVEAILEMHPPQTVKGLQSFLGSMNFVRKYIPHLATATEPLFEL-----IRHTQKAKWNRPQQTAFGEYQRLLSTAPVLYFPDFSKEFFVHVDASNVGTGAYFEP-------IIAYHSALLSPSQRKYSATQKECLAVILAIQHWRPYVWGKYFTVITDHSALR 175
            F  K++ YLGH +S  GI +   R++AIL++  P+T+K L+S LG++N+V+++IP LAT T PL +L     ++H  + +W      AF E + LL+ APVL+FPDFSKEF VHVDAS  G GA+          IIAY S   + SQ+ YSAT KEC AV+LAIQHWRPY+WGK+FT +TDH+ALR
Sbjct:   39 FGPKEVKYLGHVLSSDGIRLGDDRIKAILDLPTPKTIKELRSVLGTVNYVKRFIPDLATITAPLVDLTKKDAVKHVAR-RWGPEHDQAFAEVKNLLTKAPVLHFPDFSKEFVVHVDASEAGAGAFLAQQNGDDLNIIAYFSQRFNKSQQHYSATMKECYAVVLAIQHWRPYLWGKHFTCVTDHAALR 224          
BLAST of mRNA_C-tenellus_contig10220.1.1 vs. uniprot
Match: A0A6H5KRQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRQ8_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 4.470e-54
Identity = 93/186 (50.00%), Postives = 127/186 (68.28%), Query Frame = 0
Query:    1 FVSKQIHYLGHDVSPQGIAVSQARVEAILEMHPPQTVKGLQSFLGSMNFVRKYIPHLATATEPLFELIR--HTQKA--KWNRPQQTAFGEYQRLLSTAPVLYFPDFSKEFFVHVDASNVGTGAYFEP-------IIAYHSALLSPSQRKYSATQKECLAVILAIQHWRPYVWGKYFTVITDHSALR 175
            F  +++ YLGH +S +GI + + R++AI+++  P+T+K L+S LG +NFVRKYIP L+T   PL EL +  H +    +WN+    AF E +RLLS APVL FPDF++ F VHVDAS VG GA+          IIAY S   + +QR YS T KEC  V+L++QHWRPY+WGK+F V+TDH+ALR
Sbjct:   95 FGPREVKYLGHILSEKGIRIGEDRIKAIIDLPTPKTIKELRSALGMVNFVRKYIPDLSTVIAPLVELTQKEHVKSIAKRWNQEHDKAFAEVKRLLSEAPVLCFPDFTRSFVVHVDASEVGAGAFLAQKNGDDLNIIAYFSQRFNKAQRHYSPTMKECYGVVLSLQHWRPYLWGKHFEVVTDHAALR 280          
BLAST of mRNA_C-tenellus_contig10220.1.1 vs. uniprot
Match: A0A6H5KHS5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHS5_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 1.380e-53
Identity = 90/185 (48.65%), Postives = 122/185 (65.95%), Query Frame = 0
Query:    1 FVSKQIHYLGHDVSPQGIAVSQARVEAILEMHPPQTVKGLQSFLGSMNFVRKYIPHLATATEPLFELIR----HTQKAKWNRPQQTAFGEYQRLLSTAPVLYFPDFSKEFFVHVDASNVGTGAYFEP-------IIAYHSALLSPSQRKYSATQKECLAVILAIQHWRPYVWGKYFTVITDHSAL 174
            F  +++ YLGH +S  GI + + R+++IL++  P  +K L+S LG +N+VRK+IP+LA  T PL EL +     +   +W      AF E + L + APVL+FPDFSKEF +HVDAS  G GA+          IIAY S   + SQR YSAT KEC AV+LAIQHWRPY+WG++FT +TDH+AL
Sbjct:  172 FGPREVKYLGHILSADGIRLGEDRIKSILDLPTPTNIKELRSVLGMVNYVRKFIPNLAAITAPLVELTKKEAVQSVAKRWGPEHDKAFAEIKSLHTKAPVLHFPDFSKEFAIHVDASETGAGAFLAQKNGDDLNIIAYFSQRFNKSQRHYSATMKECYAVVLAIQHWRPYLWGRHFTCVTDHAAL 356          
BLAST of mRNA_C-tenellus_contig10220.1.1 vs. uniprot
Match: A0A6H5K1J3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J3_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 1.750e-53
Identity = 92/186 (49.46%), Postives = 123/186 (66.13%), Query Frame = 0
Query:    1 FVSKQIHYLGHDVSPQGIAVSQARVEAILEMHPPQTVKGLQSFLGSMNFVRKYIPHLATATEPLFELIRH----TQKAKWNRPQQTAFGEYQRLLSTAPVLYFPDFSKEFFVHVDASNVGTGAYFEP-------IIAYHSALLSPSQRKYSATQKECLAVILAIQHWRPYVWGKYFTVITDHSALR 175
            F  +++ YLGH +S  GI + + R+++IL++  P  +K L+S LG +N+VRK+IP+LA  T PL EL +     +   +W      AF E + LL+ APVL+FPDFSKEF +HVDAS  G GA+          IIAY S   + SQR YSAT KEC AV+LAIQHWRPY+WG+ FT +TDH+ALR
Sbjct:  172 FGPREVKYLGHILSADGIRLGEDRIKSILDLPTPTNIKELRSVLGMVNYVRKFIPNLAAITAPLVELTKKEAVKSVAKRWGPEHDKAFAEIRSLLTKAPVLHFPDFSKEFVIHVDASETGAGAFLAQKNGDDLNIIAYFSQRFNKSQRHYSATMKECYAVVLAIQHWRPYLWGRNFTCVTDHAALR 357          
BLAST of mRNA_C-tenellus_contig10220.1.1 vs. uniprot
Match: A0A6H5KJC7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC7_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 2.020e-53
Identity = 91/186 (48.92%), Postives = 121/186 (65.05%), Query Frame = 0
Query:    1 FVSKQIHYLGHDVSPQGIAVSQARVEAILEMHPPQTVKGLQSFLGSMNFVRKYIPHLATATEPLFELIRHTQKAK----WNRPQQTAFGEYQRLLSTAPVLYFPDFSKEFFVHVDASNVGTGAYFEP-------IIAYHSALLSPSQRKYSATQKECLAVILAIQHWRPYVWGKYFTVITDHSALR 175
            F  K++ YLGH +S  GI +   R++AIL++  P  +K L+S LG +N+VRK+IP LAT   P+ +L +          W      AF + ++LL+ APVL+FPDFSKEF +HVDAS  G GA+          IIAY S   + SQR YSAT KEC AV+LAIQHWRPY+WG++FT +TDH+ALR
Sbjct:  124 FGPKEVKYLGHILSSDGIRLGDDRIQAILDLPTPTNIKELRSVLGMVNYVRKFIPDLATTIAPMVDLTKKESLKSIAKLWGPEHDAAFAKVKKLLTEAPVLHFPDFSKEFVIHVDASETGAGAFLAQRNGDDLNIIAYFSQRFNKSQRHYSATMKECYAVVLAIQHWRPYLWGRHFTCVTDHAALR 309          
BLAST of mRNA_C-tenellus_contig10220.1.1 vs. uniprot
Match: A0A6H5JQW2_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW2_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 7.150e-52
Identity = 90/187 (48.13%), Postives = 123/187 (65.78%), Query Frame = 0
Query:    1 FVSKQIHYLGHDVSPQGIAVSQARVEAILEMHPPQTVKGLQSFLGSMNFVRKYIPHLATATEPLFELI-RHTQKA---KWNRPQQTAFGEYQRLLSTAPVLYFPDFSKEFFVHVDASNVGTGAYFEP-------IIAYHSALLSPSQ-RKYSATQKECLAVILAIQHWRPYVWGKYFTVITDHSALR 175
            F  +++ +LGH  S  GI + + R++AIL++  P  +K L+S LG++N+VRK+IP+LAT T PL +   +   K+   +W      A+ E  +LL+ APVL FPDFSKEF +HVDASNVGT A+          IIAY     + SQ   YSAT KEC  V+LAIQHWRPY+WG++FT +TDH+ALR
Sbjct:   56 FGPQEVKFLGHIFSSDGIRLGEDRIKAILDIPTPTNIKELRSVLGTVNYVRKFIPNLATITAPLVDFTEKEAMKSVAKRWGPEHNKAYAEANKLLTAAPVLNFPDFSKEFVIHVDASNVGTRAFLAQQDGDDLKIIAYFGQRFNKSQLHYYSATMKECYGVVLAIQHWRPYLWGRHFTCVTDHAALR 242          
BLAST of mRNA_C-tenellus_contig10220.1.1 vs. uniprot
Match: A0A6H5JU37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU37_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.720e-51
Identity = 91/186 (48.92%), Postives = 121/186 (65.05%), Query Frame = 0
Query:    1 FVSKQIHYLGHDVSPQGIAVSQARVEAILEMHPPQTVKGLQSFLGSMNFVRKYIPHLATATEPLFELIRHTQKAK----WNRPQQTAFGEYQRLLSTAPVLYFPDFSKEFFVHVDASNVGTGAYFEP-------IIAYHSALLSPSQRKYSATQKECLAVILAIQHWRPYVWGKYFTVITDHSALR 175
            F  K++ YLGH +S  GI +   R++AIL++  P  +K L+S LG +N+VRK+IP LAT   P+ +L +          W      AF + ++LL+ APVL+FPDFSKEF +HVDAS  G GA+          IIAY S   + SQR YSAT KEC AV+LAIQHWRPY+WG++FT +TDH+ALR
Sbjct:  124 FGPKEVKYLGHILSSDGIRLGDDRIQAILDLPTPTNIKELRSVLGMVNYVRKFIPDLATTIAPMVDLTKKESLKSIAKLWGPEHDAAFAKVKKLLTEAPVLHFPDFSKEFVIHVDASETGAGAFLAQRNGDDLNIIAYFSQRFNKSQRHYSATMKECYAVVLAIQHWRPYLWGRHFTCVTDHAALR 309          
BLAST of mRNA_C-tenellus_contig10220.1.1 vs. uniprot
Match: A0A6H5KKE6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKE6_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 4.850e-51
Identity = 88/186 (47.31%), Postives = 127/186 (68.28%), Query Frame = 0
Query:    1 FVSKQIHYLGHDVSPQGIAVSQARVEAILEMHPPQTVKGLQSFLGSMNFVRKYIPHLATATEPLFELIR--HTQKA--KWNRPQQTAFGEYQRLLSTAPVLYFPDFSKEFFVHVDASNVGTGAYFEP-------IIAYHSALLSPSQRKYSATQKECLAVILAIQHWRPYVWGKYFTVITDHSALR 175
            F  +++ YLGH +S +GI + + R+++I+++  P+T+K L+S LG +N+VRK+IP L+T   PL  L +  H +    +WN+    AF + + LLS APVL FPDF+K+F VHVDAS VG GA+          IIAY S   + +QR YSAT KEC  V+L++QHWRPY+WG++F V+TDH+ALR
Sbjct:  359 FGPQEVKYLGHILSAKGIRIGEDRIQSIIDLPVPKTIKALRSVLGMVNYVRKFIPDLSTVIAPLVGLTQKEHVKSIAKRWNQEHDKAFADIKHLLSKAPVLCFPDFTKDFVVHVDASEVGAGAFLGQKNGDDVNIIAYFSQRFNKAQRHYSATMKECYGVVLSLQHWRPYLWGRHFEVVTDHAALR 544          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10220.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K010_9PHAE1.470e-5750.27RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5L2D4_9PHAE5.140e-5547.85Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KUM8_9PHAE9.210e-5550.80Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KRQ8_9PHAE4.470e-5450.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KHS5_9PHAE1.380e-5348.65Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K1J3_9PHAE1.750e-5349.46Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC7_9PHAE2.020e-5348.92Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JQW2_9PHAE7.150e-5248.13RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JU37_9PHAE1.720e-5148.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKE6_9PHAE4.850e-5147.31Reverse transcriptase domain-containing protein n=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 22..110
e-value: 1.4E-22
score: 81.5
IPR041577Reverse transcriptase/retrotransposon-derived protein, RNase H-like domainPFAMPF17919RT_RNaseH_2coord: 76..167
e-value: 2.6E-25
score: 88.3
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 4..174
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 4..174
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10220contigC-tenellus_contig10220:2279..3083 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10220.1.1mRNA_C-tenellus_contig10220.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10220 2279..3083 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10220.1.1 ID=prot_C-tenellus_contig10220.1.1|Name=mRNA_C-tenellus_contig10220.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=179bp
FVSKQIHYLGHDVSPQGIAVSQARVEAILEMHPPQTVKGLQSFLGSMNFV
RKYIPHLATATEPLFELIRHTQKAKWNRPQQTAFGEYQRLLSTAPVLYFP
DFSKEFFVHVDASNVGTGAYFEPIIAYHSALLSPSQRKYSATQKECLAVI
LAIQHWRPYVWGKYFTVITDHSALRPIC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043128Rev_trsase/Diguanyl_cyclase
IPR041577RT_RNaseH_2
IPR043502DNA/RNA_pol_sf