prot_C-tenellus_contig9805.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9805.1.1
Unique Nameprot_C-tenellus_contig9805.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length54
Homology
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BLAST of mRNA_C-tenellus_contig9805.1.1 vs. uniprot
Match: A0A6H5L4M0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M0_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 2.490e-14
Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 0 
Query:    1 WRNQLWQPRAFFWHEVNYLEKMTKDTEFLLSDSGQSMLASVGLDVTDLVRHLV 53
            WR  LWQPRAF W  VNYLEKM++DT FL S  G+S+LASVGL+  D+V  LV
Sbjct:  310 WRTNLWQPRAFCWRGVNYLEKMSQDTIFLRSPVGKSLLASVGLEAEDMVSRLV 362
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BLAST of mRNA_C-tenellus_contig9805.1.1 vs. uniprot
Match: D7FNH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNH8_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 1.050e-12
Identity = 32/48 (66.67%), Postives = 36/48 (75.00%), Query Frame = 0 
Query:    1 WRNQLWQPRAFFWHEVNYLEKMTKDTEFLLSDSGQSMLASVGLDVTDL 48
            WR  LWQPRAF W  VNYLEKM +DT FL S  GQS+LASVGL+  D+
Sbjct:  313 WRTNLWQPRAFCWRGVNYLEKMWQDTIFLRSPVGQSLLASVGLEAKDM 360
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9805.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4M0_9PHAE2.490e-1464.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNH8_ECTSI1.050e-1266.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9805contigC-tenellus_contig9805:5434..5595 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9805.1.1mRNA_C-tenellus_contig9805.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9805 5434..5595 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9805.1.1 ID=prot_C-tenellus_contig9805.1.1|Name=mRNA_C-tenellus_contig9805.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=54bp
WRNQLWQPRAFFWHEVNYLEKMTKDTEFLLSDSGQSMLASVGLDVTDLVR
HLV*
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