prot_C-tenellus_contig9803.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9803.1.1
Unique Nameprot_C-tenellus_contig9803.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length98
Homology
BLAST of mRNA_C-tenellus_contig9803.1.1 vs. uniprot
Match: D7G978_ECTSI (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G978_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 7.290e-41
Identity = 65/95 (68.42%), Postives = 78/95 (82.11%), Query Frame = 0
Query:    1 PAYHSKLGNIDCEVACGCAILPLATKFRGPAQLLQPGQDDIVAEALYFFRANVLFRNFEIKGAADRTLIYLTFYTQQCLKELEKIPDKAQGEYAL 95
            PAYHSK  + + +V CGCAILPL+T  RGPA L QPG++DIV EALY+FRANVLFRN++I+G+ADRTLIYLTF+ QQCLKELEK P K +   AL
Sbjct:    7 PAYHSKQTDENAQVCCGCAILPLSTTVRGPAPLAQPGREDIVEEALYYFRANVLFRNYQIEGSADRTLIYLTFFIQQCLKELEKHPGKKEASRAL 101          
BLAST of mRNA_C-tenellus_contig9803.1.1 vs. uniprot
Match: R1DRS6_EMIHU (Actin-related protein 2/3 complex subunit 3 n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DRS6_EMIHU)

HSP 1 Score: 124 bits (311), Expect = 4.070e-34
Identity = 58/93 (62.37%), Postives = 68/93 (73.12%), Query Frame = 0
Query:    3 YHSKLGNIDCEVACGCAILPLATKFRGPAQLLQPGQDDIVAEALYFFRANVLFRNFEIKGAADRTLIYLTFYTQQCLKELEKIPDKAQGEYAL 95
            YHS L   + EVACGCAILPL T  RGPA+    G++DIV E L +F+ANVLF++FE+KGAADRTLIYLT YT QCLK LE  P +  G  AL
Sbjct:    4 YHSSLNGTETEVACGCAILPLKTSIRGPAESAAEGEEDIVDETLGYFKANVLFKHFEVKGAADRTLIYLTLYTTQCLKRLETCPTQTDGVKAL 96          
BLAST of mRNA_C-tenellus_contig9803.1.1 vs. uniprot
Match: A0A835YQX6_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQX6_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.690e-33
Identity = 58/96 (60.42%), Postives = 69/96 (71.88%), Query Frame = 0
Query:    1 PAYHSKLGNIDCEVACGCAILPLATKFRGPAQLLQPG-QDDIVAEALYFFRANVLFRNFEIKGAADRTLIYLTFYTQQCLKELEKIPDKAQGEYAL 95
            PAYHSKL       ACGCAILPL T  RGPA +L  G Q+DI+ E L++FRAN++FRNF ++  ADRTLIYLTFY QQCL+E+EK  DK     AL
Sbjct:    2 PAYHSKLQGTSVGDACGCAILPLRTNLRGPAPILPKGDQEDIIDETLFYFRANIMFRNFAVESNADRTLIYLTFYAQQCLREMEKTDDKQAANRAL 97          
BLAST of mRNA_C-tenellus_contig9803.1.1 vs. uniprot
Match: A0A7S2RMH4_9STRA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMH4_9STRA)

HSP 1 Score: 119 bits (299), Expect = 3.830e-32
Identity = 55/96 (57.29%), Postives = 68/96 (70.83%), Query Frame = 0
Query:    1 PAYHSKLGNIDCEVACGCAILPLATKFRGPAQLLQPGQDDIVAEALYFFRANVLFRNFEIKGAADRTLIYLTFYTQQCLKELEKIPDKAQGEYALE 96
            P YHSK    + +  CGCA+LPL T+ RGPA  +   +DD++ E + FFRANVLFRNFEIK +ADRTLIYLT Y QQCLKE E+     +GE AL+
Sbjct:   12 PVYHSKFTGQEGQEMCGCALLPLKTRVRGPAPPMPEDEDDVIDETIKFFRANVLFRNFEIKNSADRTLIYLTLYLQQCLKECERAKTVGEGEKALQ 107          
BLAST of mRNA_C-tenellus_contig9803.1.1 vs. uniprot
Match: A0A7S4BNT7_CHRCT (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BNT7_CHRCT)

HSP 1 Score: 116 bits (290), Expect = 5.990e-31
Identity = 53/93 (56.99%), Postives = 64/93 (68.82%), Query Frame = 0
Query:    3 YHSKLGNIDCEVACGCAILPLATKFRGPAQLLQPGQDDIVAEALYFFRANVLFRNFEIKGAADRTLIYLTFYTQQCLKELEKIPDKAQGEYAL 95
            YHS L  +D E ACG AILP+ T  RGPA       DD++ E L+FF+ANVLFR+FE+KG ADR LIYLT Y  QCLK+LE +PD+     AL
Sbjct:    3 YHSSLNGVDAEAACGLAILPIKTAVRGPAPAAPAESDDVIDETLFFFKANVLFRHFELKGNADRVLIYLTLYITQCLKKLEGLPDRVSALKAL 95          
BLAST of mRNA_C-tenellus_contig9803.1.1 vs. uniprot
Match: A0A7S1U2P7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2P7_9STRA)

HSP 1 Score: 117 bits (293), Expect = 6.950e-31
Identity = 53/97 (54.64%), Postives = 68/97 (70.10%), Query Frame = 0
Query:    1 PAYHSKLGNIDCEVACGCAILPLATKFRGPAQLLQPGQDDIVAEALYFFRANVLFRNFEIKGAADRTLIYLTFYTQQCLKELEKIPDKAQGEYALEV 97
            PAYHSK   +D + ACGCA+LPL T  RGPA +   G++DI+ EALY+FRANVLFRN+EIK AADRTLIY+T Y    L+E ++I         L++
Sbjct:   43 PAYHSKFAELDADEACGCALLPLRTSKRGPAPVSPDGEEDILDEALYYFRANVLFRNYEIKSAADRTLIYMTLYVTMILRECDRIGSATDASRQLQL 139          
BLAST of mRNA_C-tenellus_contig9803.1.1 vs. uniprot
Match: A0A7S4BNA8_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BNA8_CHRCT)

HSP 1 Score: 116 bits (290), Expect = 2.710e-30
Identity = 53/93 (56.99%), Postives = 64/93 (68.82%), Query Frame = 0
Query:    3 YHSKLGNIDCEVACGCAILPLATKFRGPAQLLQPGQDDIVAEALYFFRANVLFRNFEIKGAADRTLIYLTFYTQQCLKELEKIPDKAQGEYAL 95
            YHS L  +D E ACG AILP+ T  RGPA       DD++ E L+FF+ANVLFR+FE+KG ADR LIYLT Y  QCLK+LE +PD+     AL
Sbjct:    3 YHSSLNGVDAEAACGLAILPIKTAVRGPAPAAPAESDDVIDETLFFFKANVLFRHFELKGNADRVLIYLTLYITQCLKKLEGLPDRVSALKAL 95          
BLAST of mRNA_C-tenellus_contig9803.1.1 vs. uniprot
Match: A0A7S0Q1V8_9EUKA (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q1V8_9EUKA)

HSP 1 Score: 113 bits (283), Expect = 7.870e-30
Identity = 52/90 (57.78%), Postives = 65/90 (72.22%), Query Frame = 0
Query:    3 YHSKLGNI-DCEVACGCAILPLATKFRGPAQLLQPGQDDIVAEALYFFRANVLFRNFEIKGAADRTLIYLTFYTQQCLKELEKIPDKAQG 91
            YHS L +I D EV CGC+ILP+ T  RGPA +   G+DDI+ E + FF+ANVLF++FE+KG ADR LIYLT Y  QCLK+LE  P K + 
Sbjct:    7 YHSSLNDIADAEVVCGCSILPIKTTTRGPAPVASEGEDDIIDETIGFFKANVLFKHFEVKGPADRVLIYLTLYITQCLKKLEGAPSKMEA 96          
BLAST of mRNA_C-tenellus_contig9803.1.1 vs. uniprot
Match: A0A8J6CIQ6_DIALT (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CIQ6_DIALT)

HSP 1 Score: 112 bits (281), Expect = 1.500e-29
Identity = 51/95 (53.68%), Postives = 68/95 (71.58%), Query Frame = 0
Query:    2 AYHSKLGNIDCE-VACGCAILPLATKFRGPAQLLQPGQDDIVAEALYFFRANVLFRNFEIKGAADRTLIYLTFYTQQCLKELEKIPDKAQGEYAL 95
            A+HS+  + D   +ACGCA+LP+ T  RGPA  L  G++DI+ E L+FF+ANVLFRNFE++G+ADR L+YLT Y  +CLK +E  P KA    AL
Sbjct:    2 AFHSQFKDEDAATIACGCAVLPIRTTCRGPAPSLTAGKEDIIDEVLFFFKANVLFRNFEVRGSADRLLVYLTLYVTECLKRVEAAPSKADAVRAL 96          
BLAST of mRNA_C-tenellus_contig9803.1.1 vs. uniprot
Match: F0Y6P7_AURAN (Actin-related protein 2/3 complex subunit 3 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6P7_AURAN)

HSP 1 Score: 110 bits (276), Expect = 8.520e-29
Identity = 53/96 (55.21%), Postives = 67/96 (69.79%), Query Frame = 0
Query:    1 PAYHSKLGNIDC-EVACGCAILPLATKFRGPAQLLQPGQDDIVAEALYFFRANVLFRNFEIKGAADRTLIYLTFYTQQCLKELEKIPDKAQGEYAL 95
            PAYHSK    +  + ACGCA+LPL TK RGPA L+  G++DIV E + ++R N LFRNFE+KG ADR+LIYLT   QQ LKE E+   + + E AL
Sbjct:    2 PAYHSKYAGAETGDEACGCALLPLKTKTRGPAPLMADGEEDIVDEVIKYYRPNSLFRNFEVKGGADRSLIYLTLSMQQFLKECERFKTRGEAEKAL 97          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9803.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G978_ECTSI7.290e-4168.42Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
R1DRS6_EMIHU4.070e-3462.37Actin-related protein 2/3 complex subunit 3 n=3 Ta... [more]
A0A835YQX6_9STRA1.690e-3360.42Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7S2RMH4_9STRA3.830e-3257.29Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7S4BNT7_CHRCT5.990e-3156.99Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A7S1U2P7_9STRA6.950e-3154.64Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4BNA8_CHRCT2.710e-3056.99Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0Q1V8_9EUKA7.870e-3057.78Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
A0A8J6CIQ6_DIALT1.500e-2953.68Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]
F0Y6P7_AURAN8.520e-2955.21Actin-related protein 2/3 complex subunit 3 n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036753Actin-related protein 2/3 complex subunit 3 superfamilyGENE3D1.10.1760.10coord: 1..97
e-value: 2.9E-33
score: 117.1
IPR036753Actin-related protein 2/3 complex subunit 3 superfamilySUPERFAMILY69060Arp2/3 complex 21 kDa subunit ARPC3coord: 1..94
IPR007204Actin-related protein 2/3 complex subunit 3PFAMPF04062P21-Arccoord: 1..95
e-value: 2.3E-33
score: 115.7
IPR007204Actin-related protein 2/3 complex subunit 3PANTHERPTHR12391ARP2/3 COMPLEX 21 KD SUBUNITcoord: 2..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9803contigC-tenellus_contig9803:1154..1628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9803.1.1mRNA_C-tenellus_contig9803.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9803 146..1628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9803.1.1 ID=prot_C-tenellus_contig9803.1.1|Name=mRNA_C-tenellus_contig9803.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=98bp
PAYHSKLGNIDCEVACGCAILPLATKFRGPAQLLQPGQDDIVAEALYFFR
ANVLFRNFEIKGAADRTLIYLTFYTQQCLKELEKIPDKAQGEYALEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036753ARPC3_sf
IPR007204ARPC3