prot_C-tenellus_contig9718.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9718.1.1
Unique Nameprot_C-tenellus_contig9718.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length50
Homology
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BLAST of mRNA_C-tenellus_contig9718.1.1 vs. uniprot
Match: A0A6H5L0B7_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0B7_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 9.040e-8
Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0 
Query:    1 MLHRMVQQLGSTRDTPELRGQLRCQVDVVKELGAQIEGEV 40
            +LHRMVQQLG+ RDT ELRGQ RCQ+ V+ EL  +I+G++
Sbjct:  136 LLHRMVQQLGTARDTGELRGQCRCQLQVIDELREKIQGQM 175
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BLAST of mRNA_C-tenellus_contig9718.1.1 vs. uniprot
Match: D7FPU1_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPU1_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 5.430e-7
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:    1 MLHRMVQQLGSTRDTPELRGQLRCQVDVVKELGAQIEGEV 40
            +LHRMVQQLG+ RDT ELRGQ RCQ+ V+ EL  +I+ ++
Sbjct:    9 LLHRMVQQLGTARDTGELRGQCRCQLQVIGELREKIQAQM 48
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9718.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0B7_9PHAE9.040e-862.50t-SNARE coiled-coil homology domain-containing pro... [more]
D7FPU1_ECTSI5.430e-760.00Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9718contigC-tenellus_contig9718:152..301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9718.1.1mRNA_C-tenellus_contig9718.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9718 152..313 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9718.1.1 ID=prot_C-tenellus_contig9718.1.1|Name=mRNA_C-tenellus_contig9718.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=50bp
MLHRMVQQLGSTRDTPELRGQLRCQVDVVKELGAQIEGEVDFFPLFSCF*
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