mRNA_C-tenellus_contig102.2.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig102.2.2 vs. uniprot
Match: A0A6H5JA52_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JA52_9PHAE) HSP 1 Score: 369 bits (946), Expect = 8.420e-128 Identity = 184/228 (80.70%), Postives = 202/228 (88.60%), Query Frame = 1 Query: 1 MIRLKKKQDEEKTAQTA--MDVDEGTPSDAGARPKDEGDSTAGGKLHVLGIGGRRTKK-SAKSAGTRKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFQVEVTPDSGFWKGASYIFTFTVPALYPHDPPKASSDLVICNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRTNISQFEHTVKRTLKGCVMHGETFDRLL 675 MIRLKKKQD+EK A+ A M++DE TPS+A A+PK + + A GKLHVLGIGGRR K+ SAK+ GT+KTPGEIRIQKDIA+LDGGSVAEITFPNPNNLT+F+V+V PDSGFWKGASY FTFT+PALYPHDPPK V+C TKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYR NISQFE TVKRTL GCVMHGETF RL+ Sbjct: 1 MIRLKKKQDDEKAAEAAAAMEIDEETPSNAAAQPKAD-EEKAAGKLHVLGIGGRRAKRGSAKATGTKKTPGEIRIQKDIADLDGGSVAEITFPNPNNLTSFKVKVQPDSGFWKGASYHFTFTIPALYPHDPPK-----VLCETKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRDNISQFERTVKRTLAGCVMHGETFQRLI 222
BLAST of mRNA_C-tenellus_contig102.2.2 vs. uniprot
Match: A0A835YZU8_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU8_9STRA) HSP 1 Score: 300 bits (769), Expect = 4.460e-101 Identity = 143/185 (77.30%), Postives = 161/185 (87.03%), Query Frame = 1 Query: 121 GGKLHVLGIGGRRTKKSAKSAGTRKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFQVEVTPDSGFWKGASYIFTFTVPALYPHDPPKASSDLVICNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRTNISQFEHTVKRTLKGCVMHGETFDRLL 675 GG + +LGIGGRRTKK+ K A +KTPGEIRIQKDIAELDGG+VA ITFP+PNNL F+V VTPDSG+WKGASY FTFT+P YPHDPPK V+CNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYR NI++F+ V+RTL+GC M+G+ F RL+ Sbjct: 29 GGGVKLLGIGGRRTKKTGK-APPKKTPGEIRIQKDIAELDGGTVATITFPDPNNLCKFEVLVTPDSGYWKGASYNFTFTIPGHYPHDPPK-----VLCNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRNNIAEFQRIVRRTLQGCNMNGQVFPRLV 207
BLAST of mRNA_C-tenellus_contig102.2.2 vs. uniprot
Match: A0A7S3M2N2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2N2_9STRA) HSP 1 Score: 290 bits (743), Expect = 6.300e-97 Identity = 146/228 (64.04%), Postives = 175/228 (76.75%), Query Frame = 1 Query: 1 MIRLKKKQD---EEKTAQTAMDVDEGTPSDAGARPKDEGDSTAGGKLHVLGIGGRRTKKSAKSAGTRKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFQVEVTPDSGFWKGASYIFTFTVPALYPHDPPKASSDLVICNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRTNISQFEHTVKRTLKGCVMHGETFDRLL 675 MIR++KK EK A+ V+ +P + PK+E AGG L +LGIGG++ K AK AG ++TPGEIRIQKDIAELDGGSVA++ FPNPN+LT F V V+PDSGFW GA Y+FT +PALYPH+PPK V C TKIYHPNINL+GNVCLNILRE+WKPVLDINAVIYG+IYLFYEPNP+DPLN EAA+LYRT+ +QFE VKRTL+G GE F+RL+ Sbjct: 1 MIRMQKKPAPVVSEKVAEDESAVNGNSPVNVAGEPKEE--EGAGG-LSLLGIGGKQIKSGAKKAGKKRTPGEIRIQKDIAELDGGSVAQVDFPNPNDLTNFTVTVSPDSGFWSGAKYVFTVAIPALYPHEPPK-----VTCRTKIYHPNINLEGNVCLNILREEWKPVLDINAVIYGMIYLFYEPNPDDPLNREAADLYRTDKNQFERVVKRTLQGYSHAGEAFERLI 220
BLAST of mRNA_C-tenellus_contig102.2.2 vs. uniprot
Match: A0A6V1TYK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TYK4_HETAK) HSP 1 Score: 285 bits (729), Expect = 1.230e-94 Identity = 145/236 (61.44%), Postives = 180/236 (76.27%), Query Frame = 1 Query: 1 MIRLKKKQDEEKTA------QTAMDVDEGTPS--DAGARPKDE---GDSTAGGKLHVLGIGGRRTKKSAKSAGTRKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFQVEVTPDSGFWKGASYIFTFTVPALYPHDPPKASSDLVICNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRTNISQFEHTVKRTLKGCVMHGETFDRLL 675 MIRLKKKQ+E + AMDV++ + + DA A +DE G+S + G + +LGIGG++++ ++TPGE+RIQKDIAELDGG+VA ITFPNPNNLT+F+V VTPD+G W+GA+Y FTF +PA+YPH+PPK V C+TKIYHPNINLQG VCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLN EAAELYR + QFE V+R+L+G + E F+RL+ Sbjct: 1 MIRLKKKQEEAERXXXXXXXSEAMDVEQESTNGGDAKADDQDESKGGESKSSGGVKLLGIGGKKSRTGGAKKTKKRTPGELRIQKDIAELDGGNVAVITFPNPNNLTSFEVRVTPDTGMWRGATYHFTFAIPAMYPHEPPK-----VHCHTKIYHPNINLQGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNREAAELYRNDARQFERVVRRSLQGYSVGAEQFERLI 231
BLAST of mRNA_C-tenellus_contig102.2.2 vs. uniprot
Match: A0A7S3PXZ7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXZ7_9STRA) HSP 1 Score: 271 bits (694), Expect = 1.780e-89 Identity = 140/227 (61.67%), Postives = 160/227 (70.48%), Query Frame = 1 Query: 1 MIRLKKKQDEEKTAQTAMDVDEGTPSDAGARPKDEGDSTAGGKLHVLGIGGRRTK--KSAKSAGTRKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFQVEVTPDSGFWKGASYIFTFTVPALYPHDPPKASSDLVICNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRTNISQFEHTVKRTLKGCVMHGETFDRLL 675 M+ LKKK+ EEK A + P D S+ K+ +LGIGG++ K + K G R+TPGEIRIQKDIAELD G A I FPN N+LT F V VTPDSG+W GA+YIF F +P YPH PPK V C TKIYHPNINL+GNVCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLN EAAEL+R NI QFE V RTL+G + GE FD+LL Sbjct: 1 MLALKKKRAEEKARMEAEXXXXXXXXTPSSEPTDTASSSK--KVSLLGIGGKKKKTTEQGKVNGKRRTPGEIRIQKDIAELDAGKAAVIDFPNANDLTEFTVSVTPDSGYWNGATYIFHFAIPDHYPHTPPK-----VTCRTKIYHPNINLEGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNQEAAELFRNNIKQFEKVVMRTLRGAYVDGELFDKLL 220
BLAST of mRNA_C-tenellus_contig102.2.2 vs. uniprot
Match: A0A448YW25_9STRA (UBC core domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YW25_9STRA) HSP 1 Score: 270 bits (690), Expect = 6.740e-89 Identity = 125/191 (65.45%), Postives = 149/191 (78.01%), Query Frame = 1 Query: 103 EGDSTAGGKLHVLGIGGRRTKKSAKSAGTRKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFQVEVTPDSGFWKGASYIFTFTVPALYPHDPPKASSDLVICNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRTNISQFEHTVKRTLKGCVMHGETFDRLL 675 E GG++ + GIGG++ K +S+ T+KTPGEIRIQKDI ELDGG VAE+TFP PN+LT+F V +TPD+G+WKGA Y F F VPA YPH PPK V C T IYHPNI+LQG VCLNILREDW+PVLDINAVIYGLIYLFYEPNP+DPLNHEAA+L+R +I FE V RTL+G + G TF+RL+ Sbjct: 33 ESTEEGGGQVSLFGIGGQKKTKKGESSATKKTPGEIRIQKDIGELDGGKVAEVTFPKPNDLTSFNVSITPDTGYWKGARYEFEFKVPAHYPHSPPK-----VECKTSIYHPNIDLQGKVCLNILREDWRPVLDINAVIYGLIYLFYEPNPDDPLNHEAADLFRKDIQSFERLVNRTLRGGTLDGVTFERLV 218
BLAST of mRNA_C-tenellus_contig102.2.2 vs. uniprot
Match: B7G8G3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G8G3_PHATC) HSP 1 Score: 269 bits (688), Expect = 1.450e-88 Identity = 137/231 (59.31%), Postives = 168/231 (72.73%), Query Frame = 1 Query: 1 MIRLKKKQDEEKTAQ--TAMDVDEGTP---SDAGARPKDEGDSTAGGKLHVLGIGGRRTKKSAKSAGTRK-TPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFQVEVTPDSGFWKGASYIFTFTVPALYPHDPPKASSDLVICNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRTNISQFEHTVKRTLKGCVMHGETFDRLL 675 M+ LKKK++E K A A D D TP S G D K+ +LG+GG++ K+ + T+K +PGEIRIQKDIAELDGG+VA I FPN N+LT+F V ++PDSG+WKGA+Y FTFT+P YPH PPK V C TKIYHPNI+LQG VCLNILREDWKPVLDIN V+YGLIYLFYEPNP+DPLNHEAAEL+R ++ QFE V RTL+G ++ G F+RL+ Sbjct: 1 MLALKKKREEAKAAAEAAAKDADADTPIVDSGVGTHSPDNN------KVSLLGVGGKKQTKNGECKATKKRSPGEIRIQKDIAELDGGNVATIDFPNANDLTSFHVAISPDSGYWKGATYHFTFTIPPHYPHSPPK-----VECQTKIYHPNIDLQGKVCLNILREDWKPVLDINGVVYGLIYLFYEPNPDDPLNHEAAELFRKDVRQFERLVSRTLRGGILDGVQFERLV 220
BLAST of mRNA_C-tenellus_contig102.2.2 vs. uniprot
Match: A0A7S3KW38_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KW38_9STRA) HSP 1 Score: 267 bits (682), Expect = 9.680e-88 Identity = 130/195 (66.67%), Postives = 157/195 (80.51%), Query Frame = 1 Query: 100 DEGDSTAGGKLHVLGIGGRRTKKSAKSAGT---RKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFQVEVTPDSGFWKGASYIFTFTVPALYPHDPPKASSDLVICNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRTNISQFEHTVKRTLKGCVMHGETFDRLL 675 DEGDS K+ +LG+GG++ KK+ +GT ++TPGEIRIQKDIAELDGG VA I FPNPN+LT F V V PDSG+W+GA+Y F+F VP+ YPH+PPK V C+TKIYHPNI+LQG VCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAAEL+R ++ QFE V RTL+G V+ G F++L+ Sbjct: 29 DEGDSN---KVSLLGVGGKK-KKNENGSGTGGKKRTPGEIRIQKDIAELDGGKVATIEFPNPNDLTAFDVRVCPDSGYWQGATYHFSFNVPSHYPHEPPK-----VECHTKIYHPNIDLQGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAAELFRKDVRQFERLVNRTLRGGVLDGVQFEKLV 214
BLAST of mRNA_C-tenellus_contig102.2.2 vs. uniprot
Match: A0A7R9W2H1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W2H1_9STRA) HSP 1 Score: 268 bits (686), Expect = 1.150e-87 Identity = 126/185 (68.11%), Postives = 148/185 (80.00%), Query Frame = 1 Query: 127 KLHVLGIGGRRTKKSAK--SAGTRKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFQVEVTPDSGFWKGASYIFTFTVPALYPHDPPKASSDLVICNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRTNISQFEHTVKRTLKGCVMHGETFDRLL 675 K+ +LGIGG++ K + S+ ++TPGEIRIQKDIAELDGG VA I FPNPN+LTTF V VTPD+GFWKGASY+FTF +P YPH PPK V C TKIYHPNINL+G VCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAAEL+R +++QF+ V RTL G ++ F RL+ Sbjct: 82 KVSILGIGGKKKKDKGENSSSSKKRTPGEIRIQKDIAELDGGKVATIDFPNPNDLTTFHVRVTPDTGFWKGASYLFTFQIPDHYPHSPPK-----VHCETKIYHPNINLEGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAAELFRRDVNQFQRLVSRTLSGGILDNVQFQRLV 261
BLAST of mRNA_C-tenellus_contig102.2.2 vs. uniprot
Match: A0A6T7JLN4_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7JLN4_9STRA) HSP 1 Score: 265 bits (677), Expect = 7.290e-87 Identity = 123/185 (66.49%), Postives = 149/185 (80.54%), Query Frame = 1 Query: 127 KLHVLGIGGRRTKKSAK--SAGTRKTPGEIRIQKDIAELDGGSVAEITFPNPNNLTTFQVEVTPDSGFWKGASYIFTFTVPALYPHDPPKASSDLVICNTKIYHPNINLQGNVCLNILREDWKPVLDINAVIYGLIYLFYEPNPEDPLNHEAAELYRTNISQFEHTVKRTLKGCVMHGETFDRLL 675 K+ +LGIGG++ + S G ++TPGEIRIQKDIAELDGG VA I FPNPN+LT F V +TPD+GFWKGA Y FTF +PA YPH+PPK V C T+IYHPNINL+G VCLNILREDWKPVLDINAVIYGLIYLFYEPNP+DPLNHEAA+L+R +++QF V+RTL+G ++ G F+RL+ Sbjct: 43 KVSLLGIGGKKNASKGENGSGGKKRTPGEIRIQKDIAELDGGKVAIIDFPNPNDLTMFHVAITPDTGFWKGAKYDFTFQIPAHYPHNPPK-----VTCGTQIYHPNINLEGKVCLNILREDWKPVLDINAVIYGLIYLFYEPNPDDPLNHEAADLFRKDVNQFNRLVQRTLRGGILDGVPFERLV 222 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig102.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig102.2.2 >prot_C-tenellus_contig102.2.2 ID=prot_C-tenellus_contig102.2.2|Name=mRNA_C-tenellus_contig102.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=226bp MIRLKKKQDEEKTAQTAMDVDEGTPSDAGARPKDEGDSTAGGKLHVLGIGback to top mRNA from alignment at C-tenellus_contig102:2797..7370+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig102.2.2 ID=mRNA_C-tenellus_contig102.2.2|Name=mRNA_C-tenellus_contig102.2.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4574bp|location=Sequence derived from alignment at C-tenellus_contig102:2797..7370+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig102:2797..7370+ >mRNA_C-tenellus_contig102.2.2 ID=mRNA_C-tenellus_contig102.2.2|Name=mRNA_C-tenellus_contig102.2.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=678bp|location=Sequence derived from alignment at C-tenellus_contig102:2797..7370+ (Choristocarpus tenellus KU2346)back to top |