prot_C-tenellus_contig7883.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7883.1.2
Unique Nameprot_C-tenellus_contig7883.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length494
Homology
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: D8LF30_ECTSI (C3HC-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF30_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 5.990e-81
Identity = 199/488 (40.78%), Postives = 251/488 (51.43%), Query Frame = 0
Query:   24 MREDLGEQVDRALSHFDEAVRTGTLGGEKDPLGA---QEKPTRREYLEELANRIVSRLDEHDH--DRPRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSE------------------CTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEVALPASFAEYCPGGLERLAAKVRGIKGEVRDKEVANAGVGDASSRGCRGVGSKDSSVQEKGGGKGAVSL----LHNLGDDILGKAAAIAVFGWRAVDS-IPQMA--------GSPSPG-------GGK-------PRLCCALCDRRLATENFLCLSPAGPTRSGPGNTGADVSSCGTGDKGGSNHNAIISTSDIQ-----NRKRRRLSGD--LVKPMDPVAEHRSFCPWAEVQVLLEENKRRKGGEG-EGEVWPGWRYSLQSVTRWQGPN 453
            M +DL E+V  AL+ FD AVR      + +P+     QE P   + LE    RI +  D      D+P CRPWDY  F  RL TFT L WF+KP   SP VCARYGW NT RD LSC+ C+ +L F     GS   + ++                   +SF++RL S H D+CPW GN C  +FL+LP MA ED     LAR DSLLP+ +A ALPEV+LP++F ++CPGGL  LAAK      E R++   N   G A  R            Q  G GK A S     +   GD++LG AAAIA+FGW++  + +P  A        GS S G       GG         RL CALC RRL T+NFL L  AGP+ SG G T A          G      ++S+ + +     + KRRRLSG    +KPMD   EHRSFCPWA V   +       G E  EG V PGWR  L++V  WQ P+
Sbjct:    1 MPKDLEEKVVAALARFDTAVR------QANPIRLNQQQEDPREIDVLE----RIAAEADGARPLADKPTCRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFADQAAGSDGNAANDDVCGXXXXXIVAVVEPTPSSSFSSRLQSQHHDLCPWNGNACPREFLQLPPMAVEDQLADFLARLDSLLPVMRAAALPEVSLPSTFEQHCPGGLSALAAKAMPSVVETREETSENRTAG-AHKR------------QRSGSGKAAGSADNREMLRFGDEMLGTAAAIAMFGWQSAPATVPVSACAAVSPTEGSSSNGSTVAVADGGARATAKSPARLSCALCKRRLVTDNFLTLE-AGPS-SGVGCTAAGT--------GAEESPGVLSSPEGRGGSGRSGKRRRLSGGGTPLKPMDLAVEHRSFCPWAAVHPPV------AGEEAIEGAV-PGWRLPLEAVLGWQNPS 448          
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: A0A5D6Y899_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y899_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.110e-23
Identity = 121/438 (27.63%), Postives = 173/438 (39.50%), Query Frame = 0
Query:   30 EQVDRALSHFDEAVRTGTLGGEKDPLGAQEKPTRREYLEELANRIVSRLDEHDHDRPRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTAR-DELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEVALPASFAEYCPGGLERLAAKVRGIKGEVRDKEVANAGVGDASSRGCRGVGSKDSSVQEKGG------GKGAVSLLHNLGDDILGKAAAIAVFGWR--AVDSIPQMAGSPSPGGGKPRLCCALCDRRLATENFLCLSPAGPTRSGPGNTGADVSSCGTGDKGGSNHNAIISTSDIQNRKRRRLSGDLVKPMDPVAEHRSFCPW-------AEVQVLLEENKRRKGGEGEGEVW-----PGWRYSLQSV 446
            EQ+D AL+ + +A           PL A+       +L   A    S   + +   P CRPW + DF  R  +F    WFAKP ++S L  AR+GWR++ R DEL C+ C   L F    + S   +     ++AA L+SGH  +CPW  NP    F  LP  + E +R  L+ R +  L    A    + AL           LE L A     +   R     +A  G +SSR  R      + V   GG      G GA  L       +L   A ++  GW   AVD+            G  R  C +C+RR    ++               T     S    D GG         +  Q        G     +DPVA+HR FCPW       A  ++ +  +   K GE + ++W     PGW+   Q++
Sbjct:    2 EQLDAALAAWRDAT---------SPLDAKASADHSVFLP--AASAASEPPDAEKSAPSCRPWSHADFADRAASFAIATWFAKPASISALESARHGWRHSGRSDELRCDCCKQVLCFEIDAQLSEEGAQRMADAYAAMLASGHSALCPWRDNPSPAAFTTLPIASLEQVREALVKRVERAL----AACASDSAL-----------LEALGALRIDAQALARVVGREDADAGSSSSR--RRTSLAAALVCNFGGLVVPPDGSGAADLSR-----LLLHVAVVSACGWELDAVDA--------DGDAGVAR--CEICNRRWRVASYA--------------TAPRSESSADSDAGGER------AAKRQKAASADFGGAATALVDPVAQHRWFCPWVTARRQEASHELGVASDDVAKYGENDAQLWEFMLLPGWQQYAQAL 376          
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: S8E2T9_9LAMI (C3HC-type domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E2T9_9LAMI)

HSP 1 Score: 107 bits (266), Expect = 6.420e-23
Identity = 53/140 (37.86%), Postives = 74/140 (52.86%), Query Frame = 0
Query:   86 PRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEVALPASF 225
            P C+PWD +DF  RL TF ++ WFAKPQ +SP+ CAR GW N+  D + C +C  RL F      +          F+ +L +GH  +CPW  N C+ED    P ++   L      R  SL   +Q  ALP ++L  +F
Sbjct:   76 PTCKPWDRDDFFSRLSTFKSISWFAKPQVLSPVECARRGWINSDIDTVVCSYCGARLLFATPLSWTQQQVEKAAVVFSLKLEAGHKMLCPWINNACAEDIAHFPDVSSRVLAEDYKRRITSL---SQIIALPAISLSTNF 212          
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: A0A6I9SSD9_SESIN (uncharacterized protein LOC105158011 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9SSD9_SESIN)

HSP 1 Score: 111 bits (278), Expect = 2.030e-22
Identity = 61/150 (40.67%), Postives = 77/150 (51.33%), Query Frame = 0
Query:   86 PRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEVALPASFAEYCPGGLER 235
            P CRPWD +D   RL TF ++ WFAKPQ VSPL CAR GW N   D ++C  C  RL F   +  +          F+ +L SGH  +CPW  N C+ED  K P ++  DL      R   L  L+Q  ALP V LP +        LE+
Sbjct:   73 PACRPWDRDDLFRRLSTFKSMTWFAKPQVVSPLECARRGWLNVDMDTIACVSCDTRLLFSTPSAWTQQQVEKAAMVFSLKLDSGHKSLCPWINNACTEDIAKFPIVSRADLIEDYKKR---LFSLSQLIALP-VILPVAIDNIMSSQLEQ 218          
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: A0A2G9GKM9_9LAMI (C3HC-type domain-containing protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GKM9_9LAMI)

HSP 1 Score: 108 bits (269), Expect = 2.710e-21
Identity = 62/170 (36.47%), Postives = 82/170 (48.24%), Query Frame = 0
Query:   86 PRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEVA--------LPASFAEYCPGG----LERLAAKVRGI 243
            PRCRPWD ND   RL +F ++ WFAKPQ VSPL CAR GW N   D ++C  C  RL F   +             F+ +L SGH  +CPW  N C+E+  + P ++   L      RF SL  L     + +VA        L   F EY   G    LE+   ++ G+
Sbjct:   75 PRCRPWDRNDLFQRLSSFKSMTWFAKPQVVSPLECARRGWVNVDMDTIACPSCDARLLFSTPSTWGQRQVEKAAMVFSLKLESGHKLLCPWINNACTEELAQFPIVSRAVLVEDYKKRFFSLSQLIALPVISQVATNNLGSSQLEQFFREYSTSGSNVALEKSGTELLGV 244          
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: A0A8K1CEY1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEY1_PYTOL)

HSP 1 Score: 104 bits (259), Expect = 1.220e-20
Identity = 51/127 (40.16%), Postives = 68/127 (53.54%), Query Frame = 0
Query:   82 DHDRPRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLL 208
            D    +CR W + DF  RL T+    WFAKP+A+SPLVCAR+GW NTA D L C  C   L     +K S     +    FA +L++ H D+CPW  NP  E F  LP ++   +   +  R + LL
Sbjct:   58 DFTSKQCRAWSHADFLQRLATYGIATWFAKPKAISPLVCARFGWVNTASDMLQCAHCEEYLCCAIDDKLSKDGVKAVAERFAGQLATSHADMCPWKSNPSPESFTVLPILSPHQVSDDITTRMEKLL 184          
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: UPI00053F4B22 (uncharacterized protein LOC100243076 isoform X1 n=8 Tax=Vitis TaxID=3603 RepID=UPI00053F4B22)

HSP 1 Score: 106 bits (264), Expect = 1.440e-20
Identity = 55/144 (38.19%), Postives = 72/144 (50.00%), Query Frame = 0
Query:   76 SRLDEHDHDRPRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEV 219
            SR D      P CRPWD  D   RL TF ++ WFAKP+ VS + CAR GW N   D ++CE C  RL F   +  +          F+ +L +GH  +CPW  N C E+  + P    +DL  G   R  +LL L    ALP +
Sbjct:   54 SRGDIQHSSTPLCRPWDRGDLMQRLATFKSMTWFAKPEVVSAINCARRGWVNVDMDIIACEACGARLLFSAPSSWTRQQVEKAALVFSLKLDNGHRLLCPWINNACDEELAQFPPATVQDLMDGYRERASALLKLT---ALPSI 194          
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: UPI001CB8D6F9 (uncharacterized protein LOC122586697 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8D6F9)

HSP 1 Score: 104 bits (259), Expect = 4.690e-20
Identity = 50/136 (36.76%), Postives = 70/136 (51.47%), Query Frame = 0
Query:   86 PRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEVAL 221
            P CRPWD  D   R+ TF ++ WFAKP+ VS + CAR GW N   D ++CE C  RL F   +  +        + F+ +L+SGH  +CPW  N C E   + P  +  DL      R+ SLL L +   +   A+
Sbjct:   72 PVCRPWDRKDLLARIATFKSMTWFAKPEVVSAINCARRGWVNVDTDTIACESCRARLFFSTPSSWAQEQVEKAASVFSLKLNSGHKLLCPWVDNACDEKLAQFPPTSPADLVGNYKKRYASLLQLLELPVISSTAI 207          
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: A0A4D9C5L1_SALSN (C3HC-type domain-containing protein n=4 Tax=Salvia TaxID=21880 RepID=A0A4D9C5L1_SALSN)

HSP 1 Score: 104 bits (259), Expect = 5.470e-20
Identity = 56/150 (37.33%), Postives = 76/150 (50.67%), Query Frame = 0
Query:   86 PRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEVALPASFAEYCPGGLER 235
            P CRPWD  D   RL TF ++ WFAKPQ VSPL CAR GW N   D ++C  C  RL F   +             F+ +L  GH+ +CPW  N C+E+  + P ++   L      R   +L L+Q  ALP V +P +  +     LE+
Sbjct:  102 PVCRPWDRGDLVRRLSTFKSMTWFAKPQVVSPLECARRGWVNVDMDTIACVSCNTRLLFSTPSAWGKQQVEKAAMVFSLKLEGGHNLLCPWTNNSCAEELAQFPVLSRASLIEDYKGR---ILSLSQLIALP-VIVPVAIDDLRASQLEK 247          
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: UPI00053C3BFE (uncharacterized protein LOC104820411 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C3BFE)

HSP 1 Score: 103 bits (258), Expect = 6.360e-20
Identity = 54/132 (40.91%), Postives = 67/132 (50.76%), Query Frame = 0
Query:   88 CRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEV 219
            CRPWD  D   RL TF ++ WFAKPQ +S + CAR GW N   D L+CE C   L F   +  S        + F+ +L SGH  +CPW  N C E     P +  +DL      R D+LL L    ALP V
Sbjct:   80 CRPWDRGDLMKRLSTFKSMMWFAKPQVISAVNCARRGWVNVDMDTLACESCGAHLLFSTPSSWSRQQVEKAASVFSLKLDSGHKLLCPWIDNSCEETLADFPPLTPQDLVDRFQERSDALLQLL---ALPVV 208          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF30_ECTSI5.990e-8140.78C3HC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A5D6Y899_9STRA1.110e-2327.63Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
S8E2T9_9LAMI6.420e-2337.86C3HC-type domain-containing protein (Fragment) n=1... [more]
A0A6I9SSD9_SESIN2.030e-2240.67uncharacterized protein LOC105158011 n=1 Tax=Sesam... [more]
A0A2G9GKM9_9LAMI2.710e-2136.47C3HC-type domain-containing protein n=1 Tax=Handro... [more]
A0A8K1CEY1_PYTOL1.220e-2040.16Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
UPI00053F4B221.440e-2038.19uncharacterized protein LOC100243076 isoform X1 n=... [more]
UPI001CB8D6F94.690e-2036.76uncharacterized protein LOC122586697 n=1 Tax=Erige... [more]
A0A4D9C5L1_SALSN5.470e-2037.33C3HC-type domain-containing protein n=4 Tax=Salvia... [more]
UPI00053C3BFE6.360e-2040.91uncharacterized protein LOC104820411 n=1 Tax=Taren... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012935Zinc finger, C3HC-likePFAMPF07967zf-C3HCcoord: 90..211
e-value: 6.0E-27
score: 94.3
NoneNo IPR availablePANTHERPTHR15835NUCLEAR-INTERACTING PARTNER OF ALKcoord: 83..452
NoneNo IPR availablePANTHERPTHR15835:SF2NUCLEAR-INTERACTING PARTNER OF ALKcoord: 83..452

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7883contigC-tenellus_contig7883:1111..4738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7883.1.2mRNA_C-tenellus_contig7883.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig7883 833..5154 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7883.1.2 ID=prot_C-tenellus_contig7883.1.2|Name=mRNA_C-tenellus_contig7883.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=494bp
MQQGKKTQRNVPGKTKLCTQYALMREDLGEQVDRALSHFDEAVRTGTLGG
EKDPLGAQEKPTRREYLEELANRIVSRLDEHDHDRPRCRPWDYNDFTLRL
RTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKG
STSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGL
LARFDSLLPLAQAGALPEVALPASFAEYCPGGLERLAAKVRGIKGEVRDK
EVANAGVGDASSRGCRGVGSKDSSVQEKGGGKGAVSLLHNLGDDILGKAA
AIAVFGWRAVDSIPQMAGSPSPGGGKPRLCCALCDRRLATENFLCLSPAG
PTRSGPGNTGADVSSCGTGDKGGSNHNAIISTSDIQNRKRRRLSGDLVKP
MDPVAEHRSFCPWAEVQVLLEENKRRKGGEGEGEVWPGWRYSLQSVTRWQ
GPNGGGVEDSSDKSGDGRESLSLSIKVCVCKGVRQSLNVPAIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012935Znf_C3HC-like